RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 M0QYT0 321 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 BCAT2O15382 392 aaPredicted RBP11.38□□□□□ -0.59
SSBP3-206ENST00000420121 ADCY5O95622 1261 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 SEMA4FO95754 770 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 DNTTP04053 509 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 IGHV4-34P06331 123 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 SYPP08247 313 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 MMEP08473 750 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 VAV1P15498 845 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 GNSP15586 552 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 PDGFRAP16234 1089 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 CHRNB2P17787 502 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 ABCB4P21439 1286 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 FLT3P36888 993 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 SCNN1AP37088 669 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 CXCR3P49682 368 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 JAM2P57087 298 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 ST8SIA6P61647 398 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 NOMO3P69849 1222 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 ECT2LQ008S8 904 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 NME3Q13232 169 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 SLC12A1Q13621 1099 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 CST6Q15828 149 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 TTC39BQ5VTQ0 682 aaPredicted RBP11.38□□□□□ -0.59
SSBP3-206ENST00000420121 TAF3Q5VWG9 929 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 USP30Q70CQ3 517 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 TMEM35BQ8NCS4 154 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 FRS2Q8WU20 508 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 SLC20A1Q8WUM9 679 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 BIRC7Q96CA5 298 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 PGAP3Q96FM1 320 aaPredicted RBP11.38□□□□□ -0.59
SSBP3-206ENST00000420121 TBCBQ99426 244 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 BTBD1Q9H0C5 482 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 MIR1-1HGQ9H1L0 117 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 VPS16Q9H269 839 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 HSD3B7Q9H2F3 369 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 EBF2Q9HAK2 575 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 IL21RQ9HBE5 538 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 OSGEPQ9NPF4 335 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 TMPRSS4Q9NRS4 437 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 TMEM59LQ9UK28 342 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 VANGL2Q9ULK5 521 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 SIK3Q9Y2K2 1263 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 SNX10Q9Y5X0 201 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 PLXNB3Q9ULL4 1909 aa11.38□□□□□ -0.59
SSBP3-206ENST00000420121 EDDM13A0A1B0GTR0 161 aa11.37□□□□□ -0.59
SSBP3-206ENST00000420121 SPAARA0A1B0GVQ0 90 aa11.37□□□□□ -0.59
SSBP3-206ENST00000420121 MID1O15344 667 aa11.37□□□□□ -0.59
SSBP3-206ENST00000420121 CNTN5O94779 1100 aa11.37□□□□□ -0.59
SSBP3-206ENST00000420121 MOCS3O95396 460 aa11.37□□□□□ -0.59
SSBP3-206ENST00000420121 SPINK2P20155 84 aa11.37□□□□□ -0.59
SSBP3-206ENST00000420121 SULT1E1P49888 294 aa11.37□□□□□ -0.59
SSBP3-206ENST00000420121 METAP1P53582 386 aa11.37□□□□□ -0.59
SSBP3-206ENST00000420121 ATXN3P54252 364 aaPredicted RBP11.37□□□□□ -0.59
SSBP3-206ENST00000420121 FMO1Q01740 532 aa11.37□□□□□ -0.59
SSBP3-206ENST00000420121 FOXC1Q12948 553 aa11.37□□□□□ -0.59
SSBP3-206ENST00000420121 SLC14A1Q13336 389 aa11.37□□□□□ -0.59
SSBP3-206ENST00000420121 ALFQ53S48 1182 aa11.37□□□□□ -0.59
SSBP3-206ENST00000420121 RABGAP1LQ5R372 815 aa11.37□□□□□ -0.59
SSBP3-206ENST00000420121 APTXQ7Z2E3 356 aaKnown RBP11.37□□□□□ -0.59
SSBP3-206ENST00000420121 ERICH1Q86X53 443 aa11.37□□□□□ -0.59
SSBP3-206ENST00000420121 MMAAQ8IVH4 418 aaKnown RBP11.37□□□□□ -0.59
SSBP3-206ENST00000420121 STK40Q8N2I9 435 aa11.37□□□□□ -0.59
SSBP3-206ENST00000420121 HDDC3Q8N4P3 179 aa11.37□□□□□ -0.59
SSBP3-206ENST00000420121 AADATQ8N5Z0 425 aa11.37□□□□□ -0.59
SSBP3-206ENST00000420121 FAM131CQ96AQ9 280 aa11.37□□□□□ -0.59
SSBP3-206ENST00000420121 C18orf8Q96DM3 657 aa11.37□□□□□ -0.59
SSBP3-206ENST00000420121 CAMK1GQ96NX5 476 aa11.37□□□□□ -0.59
SSBP3-206ENST00000420121 RPRD1AQ96P16 312 aaPredicted RBP11.37□□□□□ -0.59
SSBP3-206ENST00000420121 FEM1AQ9BSK4 669 aa11.37□□□□□ -0.59
SSBP3-206ENST00000420121 ZDHHC5Q9C0B5 715 aa11.37□□□□□ -0.59
SSBP3-206ENST00000420121 SYNCQ9H7C4 482 aa11.37□□□□□ -0.59
SSBP3-206ENST00000420121 SGK2Q9HBY8 427 aa11.37□□□□□ -0.59
SSBP3-206ENST00000420121 FANCLQ9NW38 375 aa11.37□□□□□ -0.59
SSBP3-206ENST00000420121 FBXL12Q9NXK8 326 aa11.37□□□□□ -0.59
SSBP3-206ENST00000420121 RRN3Q9NYV6 651 aa11.37□□□□□ -0.59
SSBP3-206ENST00000420121 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.37□□□□□ -0.59
SSBP3-206ENST00000420121 ZNF212Q9UDV6 495 aa11.37□□□□□ -0.59
SSBP3-206ENST00000420121 ADAMTS1Q9UHI8 967 aa11.37□□□□□ -0.59
SSBP3-206ENST00000420121 SLC12A6Q9UHW9 1150 aa11.37□□□□□ -0.59
SSBP3-206ENST00000420121 SCML1Q9UN30 329 aa11.37□□□□□ -0.59
SSBP3-206ENST00000420121 TBC1D30Q9Y2I9 924 aa11.37□□□□□ -0.59
SSBP3-206ENST00000420121 IGLV3-10A0A075B6K4 115 aa11.36□□□□□ -0.59
SSBP3-206ENST00000420121 A0A1B0GVT2 93 aa11.36□□□□□ -0.59
SSBP3-206ENST00000420121 A0A1W2PP55 124 aa11.36□□□□□ -0.59
SSBP3-206ENST00000420121 PES1O00541 588 aaKnown RBP11.36□□□□□ -0.59
SSBP3-206ENST00000420121 SH3BP5O60239 455 aa11.36□□□□□ -0.59
SSBP3-206ENST00000420121 CBFA2T3O75081 653 aa11.36□□□□□ -0.59
SSBP3-206ENST00000420121 LSM8O95777 96 aaKnown RBP11.36□□□□□ -0.59
SSBP3-206ENST00000420121 CYP1A1P04798 512 aaPredicted RBP11.36□□□□□ -0.59
SSBP3-206ENST00000420121 ZNF18P17022 549 aa11.36□□□□□ -0.59
SSBP3-206ENST00000420121 SLC8A1P32418 973 aa11.36□□□□□ -0.59
SSBP3-206ENST00000420121 DRD3P35462 400 aa11.36□□□□□ -0.59
SSBP3-206ENST00000420121 CSNK1EP49674 416 aaKnown RBP11.36□□□□□ -0.59
SSBP3-206ENST00000420121 GALCP54803 685 aa11.36□□□□□ -0.59
SSBP3-206ENST00000420121 SNX16P57768 344 aa11.36□□□□□ -0.59
SSBP3-206ENST00000420121 RNASE9P60153 205 aaKnown RBP11.36□□□□□ -0.59
SSBP3-206ENST00000420121 POLR2FP61218 127 aaKnown RBP11.36□□□□□ -0.59
SSBP3-206ENST00000420121 NCAPHQ15003 741 aa11.36□□□□□ -0.59
SSBP3-206ENST00000420121 SLC25A52Q3SY17 297 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms