RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 MMS22LQ6ZRQ5 1243 aa10.56□□□□□ -0.72
TNFAIP3-202ENST00000420009 STK40Q8N2I9 435 aa10.56□□□□□ -0.72
TNFAIP3-202ENST00000420009 OR14C36Q8NHC7 312 aa10.56□□□□□ -0.72
TNFAIP3-202ENST00000420009 IRGQQ8WZA9 623 aa10.56□□□□□ -0.72
TNFAIP3-202ENST00000420009 PTPRN2Q92932 1015 aa10.56□□□□□ -0.72
TNFAIP3-202ENST00000420009 EEF2KMTQ96G04 330 aa10.56□□□□□ -0.72
TNFAIP3-202ENST00000420009 FCRL2Q96LA5 508 aaPredicted RBP10.56□□□□□ -0.72
TNFAIP3-202ENST00000420009 ZNF578Q96N58 590 aaPredicted RBP10.56□□□□□ -0.72
TNFAIP3-202ENST00000420009 NUCKS1Q9H1E3 243 aaKnown RBP10.56□□□□□ -0.72
TNFAIP3-202ENST00000420009 CYTH4Q9UIA0 394 aa10.56□□□□□ -0.72
TNFAIP3-202ENST00000420009 SLCO3A1Q9UIG8 710 aa10.56□□□□□ -0.72
TNFAIP3-202ENST00000420009 DMTF1Q9Y222 760 aa10.56□□□□□ -0.72
TNFAIP3-202ENST00000420009 PCDHB1Q9Y5F3 818 aa10.56□□□□□ -0.72
TNFAIP3-202ENST00000420009 COL6A6A6NMZ7 2263 aa10.56□□□□□ -0.72
TNFAIP3-202ENST00000420009 MYO18BQ8IUG5 2567 aa10.56□□□□□ -0.72
TNFAIP3-202ENST00000420009 TYW5A2RUC4 315 aaKnown RBP10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 SLC7A4O43246 635 aa10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 PLRG1O43660 514 aaKnown RBP10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 SIGLEC6O43699 453 aa10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 SDC3O75056 442 aa10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 RHOBTB3O94955 611 aa10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 LUC7L3O95232 432 aaKnown RBP10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 MT-CO3P00414 261 aa10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 RPL13P26373 211 aaKnown RBP10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 NUDT1P36639 197 aa10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 METAP1P53582 386 aa10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 TBX4P57082 545 aa10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 ECT2LQ008S8 904 aa10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 E2F1Q01094 437 aa10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 NNTQ13423 1086 aa10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 CUL2Q13617 745 aa10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 TAF1BQ53T94 588 aaPredicted RBP10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 MS4A13Q5J8X5 152 aa10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 CDCP2Q5VXM1 449 aa10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 KDM7AQ6ZMT4 941 aa10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 TRIM69Q86WT6 500 aa10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 SLC25A45Q8N413 288 aa10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 GUF1Q8N442 669 aaKnown RBP10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 CARNMT1Q8N4J0 409 aa10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 UBR7Q8N806 425 aa10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 OR4C6Q8NH72 309 aa10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 UBA3Q8TBC4 463 aa10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 SLC35F5Q8WV83 523 aa10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 SNRNP27Q8WVK2 155 aaKnown RBP10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 DDX50Q9BQ39 737 aaKnown RBP10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 SEMA4CQ9C0C4 833 aa10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 KDM4CQ9H3R0 1056 aa10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 USP25Q9UHP3 1055 aa10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 COQ4Q9Y3A0 265 aa10.55□□□□□ -0.72
TNFAIP3-202ENST00000420009 TBC1D3DA0A087WVF3 549 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 TBC1D3IA0A087WXS9 549 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 TBC1D3EA0A087X179 549 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 TBC1D3KA0A087X1G2 549 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 TBC1D3FA6NER0 549 aaPredicted RBP10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 TBC1D3LB9A6J9 549 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 K7ELQ4 463 aaPredicted RBP10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 LZTS3O60299 673 aaPredicted RBP10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 MAGEC1O60732 1142 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 IL1BP01584 269 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 LTFP02788 710 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 FYNP06241 537 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 TBC1D3HP0C7X1 549 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 VDRP11473 427 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 LCP1P13796 627 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 CD19P15391 556 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 VAV1P15498 845 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 PFKFB1P16118 471 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 STK19P49842 368 aaPredicted RBP10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 ADAM9Q13443 819 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 EDRF1Q3B7T1 1238 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 FOXD4L6Q3SYB3 417 aaPredicted RBP10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 CBWD6Q4V339 395 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 DCAF6Q58WW2 860 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 CBWD3Q5JTY5 395 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 CBWD5Q5RIA9 395 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 AGBL4Q5VU57 503 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 ATL3Q6DD88 541 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 TBC1D3GQ6DHY5 549 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 TBC1D3CQ6IPX1 549 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 LCLAT1Q6UWP7 414 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 FOXD4L3Q6VB84 417 aaPredicted RBP10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 PRPF39Q86UA1 669 aaKnown RBP10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 TBC1D3Q8IZP1 549 aaPredicted RBP10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 APCDD1Q8J025 514 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 CFAP52Q8N1V2 620 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 DQX1Q8TE96 717 aaKnown RBP10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 CLEC4CQ8WTT0 213 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 FRS2Q8WU20 508 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 TTC9Q92623 222 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 SLC39A13Q96H72 371 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 NAF1Q96HR8 494 aaKnown RBP10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 RPL10LQ96L21 214 aaKnown RBP10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 SPAG5Q96R06 1193 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 CPNE5Q9HCH3 593 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 ASCL3Q9NQ33 180 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 MAPK8IP1Q9UQF2 711 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 HPSEQ9Y251 543 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 TLR6Q9Y2C9 796 aa10.54□□□□□ -0.72
TNFAIP3-202ENST00000420009 BSNQ9UPA5 3926 aa10.53□□□□□ -0.72
TNFAIP3-202ENST00000420009 A0A1B0GVM2 712 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms