RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 NNMTP40261 264 aa16.96■□□□□ 0.31
LINC00404-201ENST00000418660 ZNF165P49910 485 aa16.96■□□□□ 0.31
LINC00404-201ENST00000418660 CDH4P55283 916 aa16.96■□□□□ 0.31
LINC00404-201ENST00000418660 GFPT1Q06210 699 aaPredicted RBP16.96■□□□□ 0.31
LINC00404-201ENST00000418660 TTC31Q49AM3 519 aaPredicted RBP16.96■□□□□ 0.31
LINC00404-201ENST00000418660 C9orf64Q5T6V5 341 aa16.96■□□□□ 0.31
LINC00404-201ENST00000418660 LRRC31Q6UY01 552 aa16.96■□□□□ 0.31
LINC00404-201ENST00000418660 FAM124AQ86V42 546 aa16.96■□□□□ 0.31
LINC00404-201ENST00000418660 ALG14Q96F25 216 aa16.96■□□□□ 0.31
LINC00404-201ENST00000418660 C11orf70Q9BRQ4 267 aa16.96■□□□□ 0.31
LINC00404-201ENST00000418660 FEM1AQ9BSK4 669 aa16.96■□□□□ 0.31
LINC00404-201ENST00000418660 CAPN10Q9HC96 672 aa16.96■□□□□ 0.31
LINC00404-201ENST00000418660 RTN4Q9NQC3 1192 aaKnown RBP16.96■□□□□ 0.31
LINC00404-201ENST00000418660 SCML1Q9UN30 329 aa16.96■□□□□ 0.31
LINC00404-201ENST00000418660 TBC1D30Q9Y2I9 924 aa16.96■□□□□ 0.31
LINC00404-201ENST00000418660 CEP192Q8TEP8 1941 aa16.96■□□□□ 0.3
LINC00404-201ENST00000418660 DRGXA6NNA5 263 aa16.95■□□□□ 0.3
LINC00404-201ENST00000418660 MEI4A8MW99 385 aa16.95■□□□□ 0.3
LINC00404-201ENST00000418660 TEX33O43247 280 aa16.95■□□□□ 0.3
LINC00404-201ENST00000418660 CCDC172P0C7W6 258 aa16.95■□□□□ 0.3
LINC00404-201ENST00000418660 GNSP15586 552 aa16.95■□□□□ 0.3
LINC00404-201ENST00000418660 FERP16591 822 aa16.95■□□□□ 0.3
LINC00404-201ENST00000418660 MAOBP27338 520 aa16.95■□□□□ 0.3
LINC00404-201ENST00000418660 NSFP46459 744 aaKnown RBP16.95■□□□□ 0.3
LINC00404-201ENST00000418660 VASPP50552 380 aaPredicted RBP16.95■□□□□ 0.3
LINC00404-201ENST00000418660 PTP4A2Q12974 167 aa16.95■□□□□ 0.3
LINC00404-201ENST00000418660 CLEC16AQ2KHT3 1053 aa16.95■□□□□ 0.3
LINC00404-201ENST00000418660 FILIP1LQ4L180 1135 aa16.95■□□□□ 0.3
LINC00404-201ENST00000418660 DCAF12L1Q5VU92 463 aa16.95■□□□□ 0.3
LINC00404-201ENST00000418660 PHLDB2Q86SQ0 1253 aa16.95■□□□□ 0.3
LINC00404-201ENST00000418660 PHF13Q86YI8 300 aaPredicted RBP16.95■□□□□ 0.3
LINC00404-201ENST00000418660 ZNF683Q8IZ20 524 aa16.95■□□□□ 0.3
LINC00404-201ENST00000418660 EMC1Q8N766 993 aa16.95■□□□□ 0.3
LINC00404-201ENST00000418660 OR52K2Q8NGK3 314 aa16.95■□□□□ 0.3
LINC00404-201ENST00000418660 RPL10LQ96L21 214 aaKnown RBP16.95■□□□□ 0.3
LINC00404-201ENST00000418660 HAPLN3Q96S86 360 aa16.95■□□□□ 0.3
LINC00404-201ENST00000418660 AGPAT1Q99943 283 aa16.95■□□□□ 0.3
LINC00404-201ENST00000418660 FUCA2Q9BTY2 467 aa16.95■□□□□ 0.3
LINC00404-201ENST00000418660 BTBD1Q9H0C5 482 aa16.95■□□□□ 0.3
LINC00404-201ENST00000418660 ADAM22Q9P0K1 906 aa16.95■□□□□ 0.3
LINC00404-201ENST00000418660 OR51B4Q9Y5P0 310 aa16.95■□□□□ 0.3
LINC00404-201ENST00000418660 CNTN5O94779 1100 aa16.94■□□□□ 0.3
LINC00404-201ENST00000418660 ACSL1P33121 698 aa16.94■□□□□ 0.3
LINC00404-201ENST00000418660 MAPK8P45983 427 aa16.94■□□□□ 0.3
LINC00404-201ENST00000418660 STK19P49842 368 aaPredicted RBP16.94■□□□□ 0.3
LINC00404-201ENST00000418660 ATXN3P54252 364 aaPredicted RBP16.94■□□□□ 0.3
LINC00404-201ENST00000418660 GSCP56915 257 aaPredicted RBP16.94■□□□□ 0.3
LINC00404-201ENST00000418660 SFSWAPQ12872 951 aaKnown RBP16.94■□□□□ 0.3
LINC00404-201ENST00000418660 KLHL40Q2TBA0 621 aa16.94■□□□□ 0.3
LINC00404-201ENST00000418660 USP30Q70CQ3 517 aa16.94■□□□□ 0.3
LINC00404-201ENST00000418660 FAM131BQ86XD5 332 aa16.94■□□□□ 0.3
LINC00404-201ENST00000418660 RXFP2Q8WXD0 754 aa16.94■□□□□ 0.3
LINC00404-201ENST00000418660 PTPRN2Q92932 1015 aa16.94■□□□□ 0.3
LINC00404-201ENST00000418660 FAM129BQ96TA1 746 aa16.94■□□□□ 0.3
LINC00404-201ENST00000418660 PABPC3Q9H361 631 aaKnown RBP16.94■□□□□ 0.3
LINC00404-201ENST00000418660 SGK2Q9HBY8 427 aa16.94■□□□□ 0.3
LINC00404-201ENST00000418660 TMPRSS4Q9NRS4 437 aa16.94■□□□□ 0.3
LINC00404-201ENST00000418660 MYO6Q9UM54 1294 aa16.94■□□□□ 0.3
LINC00404-201ENST00000418660 NCKAP1Q9Y2A7 1128 aa16.94■□□□□ 0.3
LINC00404-201ENST00000418660 SNX10Q9Y5X0 201 aa16.94■□□□□ 0.3
LINC00404-201ENST00000418660 IGLV3-10A0A075B6K4 115 aa16.93■□□□□ 0.3
LINC00404-201ENST00000418660 A0A1B0GTW7 788 aa16.93■□□□□ 0.3
LINC00404-201ENST00000418660 C2CD4BA6NLJ0 364 aa16.93■□□□□ 0.3
LINC00404-201ENST00000418660 ARHGAP33O14559 1287 aa16.93■□□□□ 0.3
LINC00404-201ENST00000418660 SEMA4FO95754 770 aa16.93■□□□□ 0.3
LINC00404-201ENST00000418660 CALB1P05937 261 aa16.93■□□□□ 0.3
LINC00404-201ENST00000418660 SYPP08247 313 aa16.93■□□□□ 0.3
LINC00404-201ENST00000418660 ADRB1P08588 477 aa16.93■□□□□ 0.3
LINC00404-201ENST00000418660 KRT3P12035 628 aa16.93■□□□□ 0.3
LINC00404-201ENST00000418660 SDC4P31431 198 aa16.93■□□□□ 0.3
LINC00404-201ENST00000418660 PTPN9P43378 593 aa16.93■□□□□ 0.3
LINC00404-201ENST00000418660 NUMBP49757 651 aa16.93■□□□□ 0.3
LINC00404-201ENST00000418660 ATP11AP98196 1134 aa16.93■□□□□ 0.3
LINC00404-201ENST00000418660 IQCB1Q15051 598 aa16.93■□□□□ 0.3
LINC00404-201ENST00000418660 CST6Q15828 149 aa16.93■□□□□ 0.3
LINC00404-201ENST00000418660 UAP1L1Q3KQV9 507 aa16.93■□□□□ 0.3
LINC00404-201ENST00000418660 CCDC14Q49A88 953 aa16.93■□□□□ 0.3
LINC00404-201ENST00000418660 ALFQ53S48 1182 aa16.93■□□□□ 0.3
LINC00404-201ENST00000418660 IRF2BP2Q7Z5L9 587 aa16.93■□□□□ 0.3
LINC00404-201ENST00000418660 MMAAQ8IVH4 418 aaKnown RBP16.93■□□□□ 0.3
LINC00404-201ENST00000418660 JOSD2Q8TAC2 188 aa16.93■□□□□ 0.3
LINC00404-201ENST00000418660 C6orf106Q9H6K1 298 aaPredicted RBP16.93■□□□□ 0.3
LINC00404-201ENST00000418660 FSCN3Q9NQT6 498 aa16.93■□□□□ 0.3
LINC00404-201ENST00000418660 SEPT11Q9NVA2 429 aaKnown RBP16.93■□□□□ 0.3
LINC00404-201ENST00000418660 FBXL12Q9NXK8 326 aa16.93■□□□□ 0.3
LINC00404-201ENST00000418660 SLC25A13Q9UJS0 675 aa16.93■□□□□ 0.3
LINC00404-201ENST00000418660 VPS28Q9UK41 221 aa16.93■□□□□ 0.3
LINC00404-201ENST00000418660 A0A1W2PQC6 194 aa16.92■□□□□ 0.3
LINC00404-201ENST00000418660 E9PAM4 449 aa16.92■□□□□ 0.3
LINC00404-201ENST00000418660 ATP9BO43861 1147 aa16.92■□□□□ 0.3
LINC00404-201ENST00000418660 KCNK5O95279 499 aa16.92■□□□□ 0.3
LINC00404-201ENST00000418660 RHOCP08134 193 aa16.92■□□□□ 0.3
LINC00404-201ENST00000418660 KCNA4P22459 653 aa16.92■□□□□ 0.3
LINC00404-201ENST00000418660 SLC8A1P32418 973 aa16.92■□□□□ 0.3
LINC00404-201ENST00000418660 KRT83P78385 493 aa16.92■□□□□ 0.3
LINC00404-201ENST00000418660 C1QBPQ07021 282 aaKnown RBP16.92■□□□□ 0.3
LINC00404-201ENST00000418660 C15orf59Q2T9L4 293 aaPredicted RBP16.92■□□□□ 0.3
LINC00404-201ENST00000418660 ARL13BQ3SXY8 428 aa16.92■□□□□ 0.3
LINC00404-201ENST00000418660 ARTNQ5T4W7 220 aa16.92■□□□□ 0.3
LINC00404-201ENST00000418660 LRSAM1Q6UWE0 723 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms