RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 LEMD2Q8NC56 503 aa21.32■■□□□ 1
CASC3-203ENST00000418132 RAB6BQ9NRW1 208 aa21.32■■□□□ 1
CASC3-203ENST00000418132 VPS18Q9P253 973 aa21.32■■□□□ 1
CASC3-203ENST00000418132 ATP8A1Q9Y2Q0 1164 aa21.32■■□□□ 1
CASC3-203ENST00000418132 DOCK6Q96HP0 2047 aa21.32■■□□□ 1
CASC3-203ENST00000418132 TRAV19A0A0A6YYK7 116 aa21.31■■□□□ 1
CASC3-203ENST00000418132 AGPSO00116 658 aa21.31■■□□□ 1
CASC3-203ENST00000418132 GREM1O60565 184 aa21.31■■□□□ 1
CASC3-203ENST00000418132 GJA1P17302 382 aa21.31■■□□□ 1
CASC3-203ENST00000418132 SPDYCQ5MJ68 293 aa21.31■■□□□ 1
CASC3-203ENST00000418132 RFWD3Q6PCD5 774 aa21.31■■□□□ 1
CASC3-203ENST00000418132 TFAP2DQ7Z6R9 452 aa21.31■■□□□ 1
CASC3-203ENST00000418132 CCDC13Q8IYE1 715 aa21.31■■□□□ 1
CASC3-203ENST00000418132 TNS4Q8IZW8 715 aa21.31■■□□□ 1
CASC3-203ENST00000418132 SHKBP1Q8TBC3 707 aa21.31■■□□□ 1
CASC3-203ENST00000418132 GDPD5Q8WTR4 605 aa21.31■■□□□ 1
CASC3-203ENST00000418132 DEPDC1BQ8WUY9 529 aa21.31■■□□□ 1
CASC3-203ENST00000418132 PRKD2Q9BZL6 878 aa21.31■■□□□ 1
CASC3-203ENST00000418132 LAMA3Q16787 3333 aa21.31■■□□□ 1
CASC3-203ENST00000418132 KCNK1O00180 336 aa21.3■■□□□ 1
CASC3-203ENST00000418132 DFFAO00273 331 aa21.3■■□□□ 1
CASC3-203ENST00000418132 OPHN1O60890 802 aa21.3■■□□□ 1
CASC3-203ENST00000418132 CKMP06732 381 aa21.3■■□□□ 1
CASC3-203ENST00000418132 RHOP08100 348 aa21.3■■□□□ 1
CASC3-203ENST00000418132 CCNCP24863 283 aa21.3■■□□□ 1
CASC3-203ENST00000418132 HSD17B3P37058 310 aa21.3■■□□□ 1
CASC3-203ENST00000418132 MAGEA6P43360 314 aa21.3■■□□□ 1
CASC3-203ENST00000418132 FAM193AP78312 1265 aa21.3■■□□□ 1
CASC3-203ENST00000418132 UAP1Q16222 522 aaPredicted RBP21.3■■□□□ 1
CASC3-203ENST00000418132 DUSP6Q16828 381 aa21.3■■□□□ 1
CASC3-203ENST00000418132 STXBP5Q5T5C0 1151 aa21.3■■□□□ 1
CASC3-203ENST00000418132 ANKRD22Q5VYY1 191 aa21.3■■□□□ 1
CASC3-203ENST00000418132 ELMSAN1Q6PJG2 1045 aa21.3■■□□□ 1
CASC3-203ENST00000418132 ARHGEF18Q6ZSZ5 1173 aa21.3■■□□□ 1
CASC3-203ENST00000418132 TAB3Q8N5C8 712 aaPredicted RBP21.3■■□□□ 1
CASC3-203ENST00000418132 SLC46A2Q9BY10 475 aa21.3■■□□□ 1
CASC3-203ENST00000418132 TLE6Q9H808 572 aa21.3■■□□□ 1
CASC3-203ENST00000418132 NOTCH4Q99466 2003 aa21.3■■□□□ 1
CASC3-203ENST00000418132 GOLGA6BA6NDN3 693 aa21.3■■□□□ 1
CASC3-203ENST00000418132 EPOPA6NHQ4 379 aa21.3■■□□□ 1
CASC3-203ENST00000418132 CHADO15335 359 aa21.3■■□□□ 1
CASC3-203ENST00000418132 MOSPD3O75425 235 aa21.3■■□□□ 1
CASC3-203ENST00000418132 METTL18O95568 372 aa21.3■■□□□ 1
CASC3-203ENST00000418132 MAPKAPK2P49137 400 aa21.3■■□□□ 1
CASC3-203ENST00000418132 PMS2P54278 862 aa21.3■■□□□ 1
CASC3-203ENST00000418132 KCNJ11Q14654 390 aa21.3■■□□□ 1
CASC3-203ENST00000418132 RABGAP1LQ5R372 815 aa21.3■■□□□ 1
CASC3-203ENST00000418132 Q6ZNB5 142 aa21.3■■□□□ 1
CASC3-203ENST00000418132 IQCKQ8N0W5 287 aa21.3■■□□□ 1
CASC3-203ENST00000418132 ATPAF2Q8N5M1 289 aa21.3■■□□□ 1
CASC3-203ENST00000418132 ZSCAN18Q8TBC5 510 aaPredicted RBP21.3■■□□□ 1
CASC3-203ENST00000418132 PWWP2AQ96N64 755 aa21.3■■□□□ 1
CASC3-203ENST00000418132 DDX50Q9BQ39 737 aaKnown RBP21.3■■□□□ 1
CASC3-203ENST00000418132 ETNK1Q9HBU6 452 aa21.3■■□□□ 1
CASC3-203ENST00000418132 ADAM21Q9UKJ8 722 aa21.3■■□□□ 1
CASC3-203ENST00000418132 MAFKO60675 156 aa21.29■■□□□ 1
CASC3-203ENST00000418132 TMEM63AO94886 807 aa21.29■■□□□ 1
CASC3-203ENST00000418132 PTPN3P26045 913 aa21.29■■□□□ 1
CASC3-203ENST00000418132 DDX6P26196 483 aaKnown RBP eCLIP21.29■■□□□ 1
CASC3-203ENST00000418132 CEP128Q6ZU80 1094 aa21.29■■□□□ 1
CASC3-203ENST00000418132 CCDC25Q86WR0 208 aa21.29■■□□□ 1
CASC3-203ENST00000418132 CIR1Q86X95 450 aaPredicted RBP21.29■■□□□ 1
CASC3-203ENST00000418132 RELL1Q8IUW5 271 aa21.29■■□□□ 1
CASC3-203ENST00000418132 ZNF567Q8N184 647 aa21.29■■□□□ 1
CASC3-203ENST00000418132 ZNF707Q96C28 371 aaPredicted RBP21.29■■□□□ 1
CASC3-203ENST00000418132 TCEAL4Q96EI5 215 aa21.29■■□□□ 1
CASC3-203ENST00000418132 PRICKLE1Q96MT3 831 aaPredicted RBP21.29■■□□□ 1
CASC3-203ENST00000418132 VAT1Q99536 393 aa21.29■■□□□ 1
CASC3-203ENST00000418132 SEPT10Q9P0V9 454 aa21.29■■□□□ 1
CASC3-203ENST00000418132 NYNRINQ9P2P1 1898 aaKnown RBP21.29■■□□□ 1
CASC3-203ENST00000418132 SHROOM3Q8TF72 1996 aa21.29■■□□□ 1
CASC3-203ENST00000418132 TCRBV7S3A2A0A539 114 aa21.28■■□□□ 1
CASC3-203ENST00000418132 SOBPA7XYQ1 873 aa21.28■■□□□ 1
CASC3-203ENST00000418132 PAPLNO95428 1278 aa21.28■■□□□ 1
CASC3-203ENST00000418132 PAPOLAP51003 745 aaKnown RBP21.28■■□□□ 1
CASC3-203ENST00000418132 ALS2CLQ60I27 953 aa21.28■■□□□ 1
CASC3-203ENST00000418132 ARHGAP36Q6ZRI8 547 aa21.28■■□□□ 1
CASC3-203ENST00000418132 TDHQ8IZJ6 230 aa21.28■■□□□ 1
CASC3-203ENST00000418132 ZFP37Q9Y6Q3 630 aaPredicted RBP21.28■■□□□ 1
CASC3-203ENST00000418132 CCDC195A0A1B0GUA6 201 aa21.28■■□□□ 1
CASC3-203ENST00000418132 NRIP1P48552 1158 aa21.28■■□□□ 1
CASC3-203ENST00000418132 SEMA5AQ13591 1074 aa21.28■■□□□ 1
CASC3-203ENST00000418132 KCNC3Q14003 757 aa21.28■■□□□ 1
CASC3-203ENST00000418132 SLC5A9Q2M3M2 681 aa21.28■■□□□ 1
CASC3-203ENST00000418132 PRSS36Q5K4E3 855 aa21.28■■□□□ 1
CASC3-203ENST00000418132 CFAP58Q5T655 872 aa21.28■■□□□ 1
CASC3-203ENST00000418132 GPR158Q5T848 1215 aa21.28■■□□□ 1
CASC3-203ENST00000418132 ZNF697Q5TEC3 545 aa21.28■■□□□ 1
CASC3-203ENST00000418132 CFAP52Q8N1V2 620 aa21.28■■□□□ 1
CASC3-203ENST00000418132 CEP41Q9BYV8 373 aa21.28■■□□□ 1
CASC3-203ENST00000418132 PHACTR1Q9C0D0 580 aa21.28■■□□□ 1
CASC3-203ENST00000418132 PABPC3Q9H361 631 aaKnown RBP21.28■■□□□ 1
CASC3-203ENST00000418132 TRHDEQ9UKU6 1024 aa21.28■■□□□ 1
CASC3-203ENST00000418132 HELZP42694 1942 aaKnown RBP21.27■■□□□ 1
CASC3-203ENST00000418132 RASA4BC9J798 803 aa21.27■■□□□ 1
CASC3-203ENST00000418132 RASA4O43374 803 aa21.27■■□□□ 1
CASC3-203ENST00000418132 RNF40O75150 1001 aa21.27■■□□□ 1
CASC3-203ENST00000418132 OR1E1P30953 314 aa21.27■■□□□ 1
CASC3-203ENST00000418132 FDFT1P37268 417 aa21.27■■□□□ 1
CASC3-203ENST00000418132 CDH4P55283 916 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms