RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 CNNM3Q8NE01 707 aa4.2□□□□□ -1.74
HMGB3P20-201ENST00000417997 ACER1Q8TDN7 264 aa4.2□□□□□ -1.74
HMGB3P20-201ENST00000417997 CHURC1Q8WUH1 139 aa4.2□□□□□ -1.74
HMGB3P20-201ENST00000417997 LPAR1Q92633 364 aa4.2□□□□□ -1.74
HMGB3P20-201ENST00000417997 DPF1Q92782 380 aa4.2□□□□□ -1.74
HMGB3P20-201ENST00000417997 NELL2Q99435 816 aa4.2□□□□□ -1.74
HMGB3P20-201ENST00000417997 NAP1L4Q99733 375 aaKnown RBP4.2□□□□□ -1.74
HMGB3P20-201ENST00000417997 SDF4Q9BRK5 362 aa4.2□□□□□ -1.74
HMGB3P20-201ENST00000417997 PYM1Q9BRP8 204 aaKnown RBP4.2□□□□□ -1.74
HMGB3P20-201ENST00000417997 GOLPH3LQ9H4A5 285 aa4.2□□□□□ -1.74
HMGB3P20-201ENST00000417997 SERTAD4Q9NUC0 356 aa4.2□□□□□ -1.74
HMGB3P20-201ENST00000417997 TMOD4Q9NZQ9 345 aa4.2□□□□□ -1.74
HMGB3P20-201ENST00000417997 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P20-201ENST00000417997 FBXO2Q9UK22 296 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P20-201ENST00000417997 ANKRD6Q9Y2G4 727 aa4.2□□□□□ -1.74
HMGB3P20-201ENST00000417997 STXBP5LQ9Y2K9 1186 aa4.2□□□□□ -1.74
HMGB3P20-201ENST00000417997 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.2□□□□□ -1.74
HMGB3P20-201ENST00000417997 ABCB11O95342 1321 aa4.2□□□□□ -1.74
HMGB3P20-201ENST00000417997 hCG_2014768A0A024R1R8 64 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 FSD2A1L4K1 749 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 WDR91A4D1P6 747 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 GOLGA6L19H0YKK7 550 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 MYO1CO00159 1063 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 LAD1O00515 517 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 DCLK1O15075 740 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 SLC16A3O15427 465 aaKnown RBP4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 AP1G1O43747 822 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 CCNT1O60563 726 aaKnown RBP4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 DNAJB5O75953 348 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 ALDH2P05091 517 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 GCFC2P16383 781 aaKnown RBP4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 CYP2C18P33260 490 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 EPHX2P34913 555 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 LIPAP38571 399 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 LOXL3P58215 753 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 SNAP25P60880 206 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 TPM4P67936 248 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 NKX6-1P78426 367 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 TCF15Q12870 199 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 PRKG1Q13976 671 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 ZNF267Q14586 743 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 NPY5RQ15761 445 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 TREML2Q5T2D2 321 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 ARL6IP4Q66PJ3 421 aaKnown RBP4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 SFRP4Q6FHJ7 346 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 RGS7BPQ6MZT1 257 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 SHC4Q6S5L8 630 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 MAVSQ7Z434 540 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 FAM109AQ8N4B1 249 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 LRRC71Q8N4P6 559 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 TBCKQ8TEA7 893 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 SMG7Q92540 1137 aaKnown RBP4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 HPS3Q969F9 1004 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 DHX58Q96C10 678 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 LRGUKQ96M69 825 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 TIGD1Q96MW7 591 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 CGRRF1Q99675 332 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 SLF1Q9BQI6 1058 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 RAB34Q9BZG1 259 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 NAT10Q9H0A0 1025 aaKnown RBP4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 PSTPIP2Q9H939 334 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 RIC8AQ9NPQ8 531 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 ANO10Q9NW15 660 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 FEM1BQ9UK73 627 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 CCPG1Q9ULG6 757 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 MRPL11Q9Y3B7 192 aaKnown RBP4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 SRPRBQ9Y5M8 271 aaKnown RBP4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 MORC2Q9Y6X9 1032 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 TRPM7Q96QT4 1865 aa4.19□□□□□ -1.74
HMGB3P20-201ENST00000417997 CGB1A6NKQ9 187 aa4.18□□□□□ -1.74
HMGB3P20-201ENST00000417997 BECN2A8MW95 431 aa4.18□□□□□ -1.74
HMGB3P20-201ENST00000417997 TARM1B6A8C7 271 aa4.18□□□□□ -1.74
HMGB3P20-201ENST00000417997 ADAMTS3O15072 1205 aa4.18□□□□□ -1.74
HMGB3P20-201ENST00000417997 POLR2DO15514 142 aaKnown RBP4.18□□□□□ -1.74
HMGB3P20-201ENST00000417997 TLR5O60602 858 aa4.18□□□□□ -1.74
HMGB3P20-201ENST00000417997 PLA2G6O60733 806 aa4.18□□□□□ -1.74
HMGB3P20-201ENST00000417997 ZBED4O75132 1171 aa4.18□□□□□ -1.74
HMGB3P20-201ENST00000417997 FLOT1O75955 427 aa4.18□□□□□ -1.74
HMGB3P20-201ENST00000417997 SMC2O95347 1197 aa4.18□□□□□ -1.74
HMGB3P20-201ENST00000417997 CAVIN2O95810 425 aa4.18□□□□□ -1.74
HMGB3P20-201ENST00000417997 JUPP14923 745 aa4.18□□□□□ -1.74
HMGB3P20-201ENST00000417997 VEGFAP15692 232 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P20-201ENST00000417997 ENGP17813 658 aa4.18□□□□□ -1.74
HMGB3P20-201ENST00000417997 PCSK6P29122 969 aa4.18□□□□□ -1.74
HMGB3P20-201ENST00000417997 LONP1P36776 959 aaKnown RBP4.18□□□□□ -1.74
HMGB3P20-201ENST00000417997 PRPHP41219 470 aa4.18□□□□□ -1.74
HMGB3P20-201ENST00000417997 UBA7P41226 1012 aa4.18□□□□□ -1.74
HMGB3P20-201ENST00000417997 STAT6P42226 847 aa4.18□□□□□ -1.74
HMGB3P20-201ENST00000417997 ZNF81P51508 661 aa4.18□□□□□ -1.74
HMGB3P20-201ENST00000417997 EEFSECP57772 596 aaKnown RBP4.18□□□□□ -1.74
HMGB3P20-201ENST00000417997 SATB1Q01826 763 aa4.18□□□□□ -1.74
HMGB3P20-201ENST00000417997 SP2Q02086 613 aa4.18□□□□□ -1.74
HMGB3P20-201ENST00000417997 CCDC173Q0VFZ6 552 aa4.18□□□□□ -1.74
HMGB3P20-201ENST00000417997 SLC10A2Q12908 348 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P20-201ENST00000417997 SPP2Q13103 211 aa4.18□□□□□ -1.74
HMGB3P20-201ENST00000417997 POSTNQ15063 836 aa4.18□□□□□ -1.74
HMGB3P20-201ENST00000417997 LLGL1Q15334 1064 aa4.18□□□□□ -1.74
HMGB3P20-201ENST00000417997 CALCRLQ16602 461 aa4.18□□□□□ -1.74
HMGB3P20-201ENST00000417997 ANO6Q4KMQ2 910 aa4.18□□□□□ -1.74
HMGB3P20-201ENST00000417997 PCID2Q5JVF3 399 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms