RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 SRPK1Q96SB4 655 aaKnown RBP10.48□□□□□ -0.73
SATB1-204ENST00000417717 GOLPH3Q9H4A6 298 aa10.48□□□□□ -0.73
SATB1-204ENST00000417717 EBF3Q9H4W6 596 aa10.48□□□□□ -0.73
SATB1-204ENST00000417717 FANCFQ9NPI8 374 aa10.48□□□□□ -0.73
SATB1-204ENST00000417717 IRAK3Q9Y616 596 aa10.48□□□□□ -0.73
SATB1-204ENST00000417717 KNDC1Q76NI1 1749 aa10.48□□□□□ -0.73
SATB1-204ENST00000417717 PDXKO00764 312 aa10.48□□□□□ -0.73
SATB1-204ENST00000417717 PIGNO95427 931 aa10.48□□□□□ -0.73
SATB1-204ENST00000417717 GRIA3P42263 894 aa10.48□□□□□ -0.73
SATB1-204ENST00000417717 EIF5AP63241 154 aaKnown RBP10.48□□□□□ -0.73
SATB1-204ENST00000417717 FRG1Q14331 258 aaKnown RBP10.48□□□□□ -0.73
SATB1-204ENST00000417717 PLEKHG4Q58EX7 1191 aa10.48□□□□□ -0.73
SATB1-204ENST00000417717 ERAP2Q6P179 960 aa10.48□□□□□ -0.73
SATB1-204ENST00000417717 ZNF517Q6ZMY9 492 aaPredicted RBP10.48□□□□□ -0.73
SATB1-204ENST00000417717 RP9Q8TA86 221 aaKnown RBP10.48□□□□□ -0.73
SATB1-204ENST00000417717 ACTRT2Q8TDY3 377 aa10.48□□□□□ -0.73
SATB1-204ENST00000417717 RMDN3Q96TC7 470 aa10.48□□□□□ -0.73
SATB1-204ENST00000417717 TRIM9Q9C026 710 aa10.48□□□□□ -0.73
SATB1-204ENST00000417717 APEX2Q9UBZ4 518 aa10.48□□□□□ -0.73
SATB1-204ENST00000417717 ZMAT5Q9UDW3 170 aaKnown RBP10.48□□□□□ -0.73
SATB1-204ENST00000417717 UBR1Q8IWV7 1749 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 BCLAF3A2AJT9 711 aaKnown RBP10.47□□□□□ -0.73
SATB1-204ENST00000417717 SYNDIG1LA6NDD5 238 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 CHP2O43745 196 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 KPNA6O60684 536 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 PAEPP09466 180 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 FAUP35544 74 aaKnown RBP10.47□□□□□ -0.73
SATB1-204ENST00000417717 FEN1P39748 380 aaKnown RBP10.47□□□□□ -0.73
SATB1-204ENST00000417717 ENTPD1P49961 510 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 RPL19P84098 196 aaKnown RBP10.47□□□□□ -0.73
SATB1-204ENST00000417717 SQLEQ14534 574 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 RRP1BQ14684 758 aaKnown RBP10.47□□□□□ -0.73
SATB1-204ENST00000417717 DDI2Q5TDH0 399 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 VWA5B1Q5TIE3 1220 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 PEG10Q86TG7 708 aaKnown RBP10.47□□□□□ -0.73
SATB1-204ENST00000417717 CYP4Z1Q86W10 505 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 MED30Q96HR3 178 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 ANKHQ9HCJ1 492 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 PRAMEF33A0A0G2JMD5 474 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 NPHP3-ACAD11A0A0J9YXS1 232 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 PRAMEF10O60809 474 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 CNPP09543 421 aaKnown RBP10.47□□□□□ -0.73
SATB1-204ENST00000417717 PSKH1P11801 424 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 SDC2P34741 201 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 SULT2A1Q06520 285 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 GALNT3Q14435 633 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 LRRC24Q50LG9 513 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 OR8K3Q8NH51 312 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 FIG4Q92562 907 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 APOL2Q9BQE5 337 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 FICDQ9BVA6 458 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 SPAG4Q9NPE6 437 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 RAD18Q9NS91 495 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 LIMD1Q9UGP4 676 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 COL3A1P02461 1466 aaPredicted RBP10.47□□□□□ -0.73
SATB1-204ENST00000417717 KIF20BQ96Q89 1820 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 RIMS1Q86UR5 1692 aaKnown RBP10.47□□□□□ -0.73
SATB1-204ENST00000417717 FAM47E-STBD1D6RA91 191 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 M0QZ92 97 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 PLOD2O00469 737 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 ARHGEF15O94989 841 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 METTL18O95568 372 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 CLTBP09497 229 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 VAMP7P51809 220 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 CDH18Q13634 790 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 CCNG2Q16589 344 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 ARMC6Q6NXE6 501 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 THAP5Q7Z6K1 395 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 FAM228AQ86W67 206 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 COLGALT2Q8IYK4 626 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 ATPAF2Q8N5M1 289 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 C12orf66Q96MD2 445 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 EYA3Q99504 573 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 RACGAP1Q9H0H5 632 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 KAT8Q9H7Z6 458 aaKnown RBP10.47□□□□□ -0.73
SATB1-204ENST00000417717 RSAD1Q9HA92 442 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 GJB4Q9NTQ9 266 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 EIF3KQ9UBQ5 218 aaKnown RBP10.47□□□□□ -0.73
SATB1-204ENST00000417717 SLC39A10Q9ULF5 831 aa10.47□□□□□ -0.73
SATB1-204ENST00000417717 DHRS12A0PJE2 317 aa10.46□□□□□ -0.73
SATB1-204ENST00000417717 SNAP29O95721 258 aa10.46□□□□□ -0.73
SATB1-204ENST00000417717 ASNSP08243 561 aa10.46□□□□□ -0.73
SATB1-204ENST00000417717 RALAP11233 206 aa10.46□□□□□ -0.73
SATB1-204ENST00000417717 DEFA6Q01524 100 aa10.46□□□□□ -0.73
SATB1-204ENST00000417717 PHKG1Q16816 387 aa10.46□□□□□ -0.73
SATB1-204ENST00000417717 CCNYL2Q5T2Q4 361 aa10.46□□□□□ -0.73
SATB1-204ENST00000417717 SLC25A24Q6NUK1 477 aa10.46□□□□□ -0.73
SATB1-204ENST00000417717 TMEM270Q6UE05 265 aa10.46□□□□□ -0.73
SATB1-204ENST00000417717 TMEM17Q86X19 198 aa10.46□□□□□ -0.73
SATB1-204ENST00000417717 SPARTQ8N0X7 666 aa10.46□□□□□ -0.73
SATB1-204ENST00000417717 ATAD1Q8NBU5 361 aa10.46□□□□□ -0.73
SATB1-204ENST00000417717 OR7G1Q8NGA0 311 aa10.46□□□□□ -0.73
SATB1-204ENST00000417717 ART5Q96L15 291 aa10.46□□□□□ -0.73
SATB1-204ENST00000417717 HEPHQ9BQS7 1158 aa10.46□□□□□ -0.73
SATB1-204ENST00000417717 YTHDF1Q9BYJ9 559 aaKnown RBP10.46□□□□□ -0.73
SATB1-204ENST00000417717 SLITRK2Q9H156 845 aa10.46□□□□□ -0.73
SATB1-204ENST00000417717 NINJ2Q9NZG7 142 aa10.46□□□□□ -0.73
SATB1-204ENST00000417717 NXF1Q9UBU9 619 aaKnown RBP10.46□□□□□ -0.73
SATB1-204ENST00000417717 PSME2Q9UL46 239 aa10.46□□□□□ -0.73
SATB1-204ENST00000417717 SNX9Q9Y5X1 595 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms