RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 HSPA14Q0VDF9 509 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 NFE2Q16621 373 aaPredicted RBP6.53□□□□□ -1.36
CCNT1-202ENST00000417344 NFIL3Q16649 462 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 SWI5Q1ZZU3 235 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 LRIT3Q3SXY7 679 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 LDLRAP1Q5SW96 308 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 UGT3A1Q6NUS8 523 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 KCTD8Q6ZWB6 473 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 MAVSQ7Z434 540 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 UBE2Q1Q7Z7E8 422 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 SLC47A2Q86VL8 602 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 RHOT1Q8IXI2 618 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 PPIL6Q8IXY8 311 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 KATNAL2Q8IYT4 538 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.53□□□□□ -1.36
CCNT1-202ENST00000417344 TFAP2CQ92754 450 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 ZUFSPQ96AP4 578 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 RMDN1Q96DB5 314 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 ZNF778Q96MU6 729 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 COQ7Q99807 217 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 SLC29A1Q99808 456 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 TUBA1CQ9BQE3 449 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 SLC13A1Q9BZW2 595 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 GLT8D2Q9H1C3 349 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 DHX33Q9H6R0 707 aaKnown RBP6.53□□□□□ -1.36
CCNT1-202ENST00000417344 NOL6Q9H6R4 1146 aaKnown RBP6.53□□□□□ -1.36
CCNT1-202ENST00000417344 PCDH9Q9HC56 1237 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 SUCOQ9UBS9 1254 aaKnown RBP6.53□□□□□ -1.36
CCNT1-202ENST00000417344 ZMAT5Q9UDW3 170 aaKnown RBP6.53□□□□□ -1.36
CCNT1-202ENST00000417344 IPO11Q9UI26 975 aaKnown RBP6.53□□□□□ -1.36
CCNT1-202ENST00000417344 SERPINB13Q9UIV8 391 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 SNCAIPQ9Y6H5 919 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 TCRBV9S1A1TA0A576 114 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 CCRL2O00421 344 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 HAT1O14929 419 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 AKAP10O43572 662 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 DYRK3O43781 588 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 MED24O75448 989 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 LYPLA1O75608 230 aaPredicted RBP6.52□□□□□ -1.37
CCNT1-202ENST00000417344 TOM1L1O75674 476 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 BBOX1O75936 387 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 KRT37O76014 449 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 DKK1O94907 266 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 CSPG5O95196 566 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 IFNB1P01574 187 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 INHAP05111 366 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 SERPINB2P05120 415 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 CD58P19256 250 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 MATN1P21941 496 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 FGFR3P22607 806 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 ME2P23368 584 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 EEF1DP29692 281 aaKnown RBP6.52□□□□□ -1.37
CCNT1-202ENST00000417344 ZNF135P52742 658 aaPredicted RBP6.52□□□□□ -1.37
CCNT1-202ENST00000417344 MAPK10P53779 464 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 GDF10P55107 478 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 IFITM3Q01628 133 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 PRKCQQ04759 706 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 CETN1Q12798 172 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 KLF10Q13118 480 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 CBLBQ13191 982 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 CLN3Q13286 438 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 BBS9Q3SYG4 887 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 GJC2Q5T442 439 aaPredicted RBP6.52□□□□□ -1.37
CCNT1-202ENST00000417344 UBE2UQ5VVX9 321 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 ANKRD22Q5VYY1 191 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 ACAD10Q6JQN1 1059 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 SLC26A11Q86WA9 606 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 FAM71AQ8IYT1 594 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 HACE1Q8IYU2 909 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 ELMOD2Q8IZ81 293 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 DSELQ8IZU8 1212 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 TTC30BQ8N4P2 665 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 NAT8LQ8N9F0 302 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 KYQ8NBH2 561 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 TOR1AIP2Q8NFQ8 470 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 ABHD11Q8NFV4 315 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 OR13F1Q8NGS4 319 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 CDK5RAP1Q96SZ6 601 aaKnown RBP6.52□□□□□ -1.37
CCNT1-202ENST00000417344 MMP19Q99542 508 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 CLSTN3Q9BQT9 956 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 MTG1Q9BT17 334 aaPredicted RBP6.52□□□□□ -1.37
CCNT1-202ENST00000417344 TMEM121Q9BTD3 319 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 OR2B2Q9GZK3 357 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 CLPBQ9H078 707 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 TMEM117Q9H0C3 514 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 TRPV6Q9H1D0 765 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 RAD21L1Q9H4I0 556 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 RPAP3Q9H6T3 665 aaPredicted RBP6.52□□□□□ -1.37
CCNT1-202ENST00000417344 GPN2Q9H9Y4 310 aaPredicted RBP6.52□□□□□ -1.37
CCNT1-202ENST00000417344 FANCEQ9HB96 536 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 DCP1AQ9NPI6 582 aaPredicted RBP6.52□□□□□ -1.37
CCNT1-202ENST00000417344 DUS2Q9NX74 493 aaKnown RBP6.52□□□□□ -1.37
CCNT1-202ENST00000417344 TXNDC16Q9P2K2 825 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 PSME2Q9UL46 239 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 ZMIZ1Q9ULJ6 1067 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 DRG1Q9Y295 367 aaKnown RBP6.52□□□□□ -1.37
CCNT1-202ENST00000417344 SPEF1Q9Y4P9 236 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 ZHX2Q9Y6X8 837 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 LAMB1P07942 1786 aa6.52□□□□□ -1.37
CCNT1-202ENST00000417344 SCN11AQ9UI33 1791 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms