RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 INTS6Q9UL03 887 aaKnown RBP23.74■■□□□ 1.39
SMARCB1-205ENST00000417137 STON1Q9Y6Q2 735 aa23.74■■□□□ 1.39
SMARCB1-205ENST00000417137 ADAM23O75077 832 aa23.73■■□□□ 1.39
SMARCB1-205ENST00000417137 APBB3O95704 486 aa23.73■■□□□ 1.39
SMARCB1-205ENST00000417137 HOXB2P14652 356 aa23.73■■□□□ 1.39
SMARCB1-205ENST00000417137 EPHB2P29323 1055 aa23.73■■□□□ 1.39
SMARCB1-205ENST00000417137 WASP42768 502 aa23.73■■□□□ 1.39
SMARCB1-205ENST00000417137 SSR1P43307 286 aaKnown RBP23.73■■□□□ 1.39
SMARCB1-205ENST00000417137 ZNF234Q14588 700 aa23.73■■□□□ 1.39
SMARCB1-205ENST00000417137 TCEAL1Q15170 157 aa23.73■■□□□ 1.39
SMARCB1-205ENST00000417137 FNDC3BQ53EP0 1204 aaKnown RBP23.73■■□□□ 1.39
SMARCB1-205ENST00000417137 SERPINA13PQ6UXR4 307 aa23.73■■□□□ 1.39
SMARCB1-205ENST00000417137 ATOH1Q92858 354 aaPredicted RBP23.73■■□□□ 1.39
SMARCB1-205ENST00000417137 SNRNP25Q9BV90 132 aaKnown RBP23.73■■□□□ 1.39
SMARCB1-205ENST00000417137 MAGEB5Q9BZ81 275 aa23.73■■□□□ 1.39
SMARCB1-205ENST00000417137 CATSPERBQ9H7T0 1116 aa23.73■■□□□ 1.39
SMARCB1-205ENST00000417137 OSGEPQ9NPF4 335 aa23.73■■□□□ 1.39
SMARCB1-205ENST00000417137 ZSCAN32Q9NX65 697 aa23.73■■□□□ 1.39
SMARCB1-205ENST00000417137 CACNA2D2Q9NY47 1150 aa23.73■■□□□ 1.39
SMARCB1-205ENST00000417137 ILVBLA1L0T0 632 aa23.72■■□□□ 1.39
SMARCB1-205ENST00000417137 MTA2O94776 668 aa23.72■■□□□ 1.39
SMARCB1-205ENST00000417137 SRPRAP08240 638 aaKnown RBP23.72■■□□□ 1.39
SMARCB1-205ENST00000417137 MZF1P28698 734 aaPredicted RBP23.72■■□□□ 1.39
SMARCB1-205ENST00000417137 NNMTP40261 264 aa23.72■■□□□ 1.39
SMARCB1-205ENST00000417137 MAPKAPK2P49137 400 aa23.72■■□□□ 1.39
SMARCB1-205ENST00000417137 KRT83P78385 493 aa23.72■■□□□ 1.39
SMARCB1-205ENST00000417137 ECT2LQ008S8 904 aa23.72■■□□□ 1.39
SMARCB1-205ENST00000417137 ENPP2Q13822 863 aa23.72■■□□□ 1.39
SMARCB1-205ENST00000417137 STARD3Q14849 445 aa23.72■■□□□ 1.39
SMARCB1-205ENST00000417137 ARTNQ5T4W7 220 aa23.72■■□□□ 1.39
SMARCB1-205ENST00000417137 ZC3H14Q6PJT7 736 aaKnown RBP23.72■■□□□ 1.39
SMARCB1-205ENST00000417137 APCDD1Q8J025 514 aa23.72■■□□□ 1.39
SMARCB1-205ENST00000417137 TXLNBQ8N3L3 684 aa23.72■■□□□ 1.39
SMARCB1-205ENST00000417137 KDM1BQ8NB78 822 aa23.72■■□□□ 1.39
SMARCB1-205ENST00000417137 CYB5D2Q8WUJ1 264 aa23.72■■□□□ 1.39
SMARCB1-205ENST00000417137 ATRIPQ8WXE1 791 aa23.72■■□□□ 1.39
SMARCB1-205ENST00000417137 HHIPQ96QV1 700 aa23.72■■□□□ 1.39
SMARCB1-205ENST00000417137 PEBP4Q96S96 227 aa23.72■■□□□ 1.39
SMARCB1-205ENST00000417137 POLR3BQ9NW08 1133 aaPredicted RBP23.72■■□□□ 1.39
SMARCB1-205ENST00000417137 TMEM248Q9NWD8 314 aa23.72■■□□□ 1.39
SMARCB1-205ENST00000417137 GPATCH2LQ9NWQ4 482 aa23.72■■□□□ 1.39
SMARCB1-205ENST00000417137 VPS28Q9UK41 221 aa23.72■■□□□ 1.39
SMARCB1-205ENST00000417137 CCDC163A0A0D9SF12 145 aa23.71■■□□□ 1.39
SMARCB1-205ENST00000417137 FGF10O15520 208 aaPredicted RBP23.71■■□□□ 1.39
SMARCB1-205ENST00000417137 SYNCRIPO60506 623 aaKnown RBP23.71■■□□□ 1.39
SMARCB1-205ENST00000417137 TDGF1P13385 188 aa23.71■■□□□ 1.39
SMARCB1-205ENST00000417137 HOXC13P31276 330 aa23.71■■□□□ 1.39
SMARCB1-205ENST00000417137 MAN1A1P33908 653 aa23.71■■□□□ 1.39
SMARCB1-205ENST00000417137 ETFBP38117 255 aa23.71■■□□□ 1.39
SMARCB1-205ENST00000417137 IL12RB1P42701 662 aa23.71■■□□□ 1.39
SMARCB1-205ENST00000417137 NOP2P46087 812 aaKnown RBP23.71■■□□□ 1.39
SMARCB1-205ENST00000417137 TPI1P60174 286 aa23.71■■□□□ 1.39
SMARCB1-205ENST00000417137 SEMA3BQ13214 749 aa23.71■■□□□ 1.39
SMARCB1-205ENST00000417137 MESDQ14696 234 aa23.71■■□□□ 1.39
SMARCB1-205ENST00000417137 TMEM92Q6UXU6 159 aa23.71■■□□□ 1.39
SMARCB1-205ENST00000417137 RAD9BQ6WBX8 426 aa23.71■■□□□ 1.39
SMARCB1-205ENST00000417137 TEKT4Q8WW24 435 aa23.71■■□□□ 1.39
SMARCB1-205ENST00000417137 ANP32BQ92688 251 aaKnown RBP23.71■■□□□ 1.39
SMARCB1-205ENST00000417137 C2orf49Q9BVC5 232 aaPredicted RBP23.71■■□□□ 1.39
SMARCB1-205ENST00000417137 ZWILCHQ9H900 591 aa23.71■■□□□ 1.39
SMARCB1-205ENST00000417137 EBF1Q9UH73 591 aa23.71■■□□□ 1.39
SMARCB1-205ENST00000417137 SUN2Q9UH99 717 aa23.71■■□□□ 1.39
SMARCB1-205ENST00000417137 ERVW-1Q9UQF0 538 aa23.71■■□□□ 1.39
SMARCB1-205ENST00000417137 PCDHGA2Q9Y5H1 932 aa23.71■■□□□ 1.39
SMARCB1-205ENST00000417137 WASH3PC4AMC7 463 aa23.7■■□□□ 1.38
SMARCB1-205ENST00000417137 EEF2KO00418 725 aaKnown RBP23.7■■□□□ 1.38
SMARCB1-205ENST00000417137 DAPK3O43293 454 aa23.7■■□□□ 1.38
SMARCB1-205ENST00000417137 PTPRNQ16849 979 aa23.7■■□□□ 1.38
SMARCB1-205ENST00000417137 NLRP14Q86W24 1093 aa23.7■■□□□ 1.38
SMARCB1-205ENST00000417137 LONP2Q86WA8 852 aa23.7■■□□□ 1.38
SMARCB1-205ENST00000417137 TMEM139Q8IV31 216 aa23.7■■□□□ 1.38
SMARCB1-205ENST00000417137 NELL1Q92832 810 aa23.7■■□□□ 1.38
SMARCB1-205ENST00000417137 ALG14Q96F25 216 aa23.7■■□□□ 1.38
SMARCB1-205ENST00000417137 CALR3Q96L12 384 aaKnown RBP23.7■■□□□ 1.38
SMARCB1-205ENST00000417137 ZNF212Q9UDV6 495 aa23.7■■□□□ 1.38
SMARCB1-205ENST00000417137 OR51B4Q9Y5P0 310 aa23.7■■□□□ 1.38
SMARCB1-205ENST00000417137 A0A0A6YYK5 440 aaPredicted RBP23.69■■□□□ 1.38
SMARCB1-205ENST00000417137 TMEM110-MUSTN1A8MSY1 372 aa23.69■■□□□ 1.38
SMARCB1-205ENST00000417137 EPHX1P07099 455 aa23.69■■□□□ 1.38
SMARCB1-205ENST00000417137 IL1R2P27930 398 aa23.69■■□□□ 1.38
SMARCB1-205ENST00000417137 HCAR3P49019 387 aa23.69■■□□□ 1.38
SMARCB1-205ENST00000417137 GNA12Q03113 381 aa23.69■■□□□ 1.38
SMARCB1-205ENST00000417137 PPP6R3Q5H9R7 873 aaPredicted RBP23.69■■□□□ 1.38
SMARCB1-205ENST00000417137 KCNT1Q5JUK3 1230 aa23.69■■□□□ 1.38
SMARCB1-205ENST00000417137 DAB2IPQ5VWQ8 1189 aa23.69■■□□□ 1.38
SMARCB1-205ENST00000417137 HEATR6Q6AI08 1181 aaKnown RBP23.69■■□□□ 1.38
SMARCB1-205ENST00000417137 CYP4V2Q6ZWL3 525 aaPredicted RBP23.69■■□□□ 1.38
SMARCB1-205ENST00000417137 WDR5BQ86VZ2 330 aa23.69■■□□□ 1.38
SMARCB1-205ENST00000417137 RTL3Q8N8U3 475 aaKnown RBP23.69■■□□□ 1.38
SMARCB1-205ENST00000417137 OR52K2Q8NGK3 314 aa23.69■■□□□ 1.38
SMARCB1-205ENST00000417137 HSPH1Q92598 858 aa23.69■■□□□ 1.38
SMARCB1-205ENST00000417137 TMEM245Q9H330 911 aa23.69■■□□□ 1.38
SMARCB1-205ENST00000417137 BCCIPQ9P287 314 aaKnown RBP eCLIP23.69■■□□□ 1.38
SMARCB1-205ENST00000417137 DNAI1Q9UI46 699 aa23.69■■□□□ 1.38
SMARCB1-205ENST00000417137 SLC25A13Q9UJS0 675 aa23.69■■□□□ 1.38
SMARCB1-205ENST00000417137 A0A1W2PQF6 199 aa23.68■■□□□ 1.38
SMARCB1-205ENST00000417137 TCRBV21S2A2A0A5A6 115 aa23.68■■□□□ 1.38
SMARCB1-205ENST00000417137 WASH4PA8MWX3 477 aa23.68■■□□□ 1.38
SMARCB1-205ENST00000417137 AXIN1O15169 862 aa23.68■■□□□ 1.38
SMARCB1-205ENST00000417137 KRT7P08729 469 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms