RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 GALNT15Q8N3T1 639 aa15.3■□□□□ 0.04
RPS28-201ENST00000417088 ATP6V0D2Q8N8Y2 350 aa15.3■□□□□ 0.04
RPS28-201ENST00000417088 ELF4Q99607 663 aaPredicted RBP15.3■□□□□ 0.04
RPS28-201ENST00000417088 PRMT1Q99873 361 aaKnown RBP15.3■□□□□ 0.04
RPS28-201ENST00000417088 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.3■□□□□ 0.04
RPS28-201ENST00000417088 DKK4Q9UBT3 224 aa15.3■□□□□ 0.04
RPS28-201ENST00000417088 NBEAQ8NFP9 2946 aa15.3■□□□□ 0.04
RPS28-201ENST00000417088 PLXNA2O75051 1894 aa15.29■□□□□ 0.04
RPS28-201ENST00000417088 TRABD2BA6NFA1 517 aa15.29■□□□□ 0.04
RPS28-201ENST00000417088 BECN2A8MW95 431 aa15.29■□□□□ 0.04
RPS28-201ENST00000417088 F5H5T6 163 aa15.29■□□□□ 0.04
RPS28-201ENST00000417088 ADH1BP00325 375 aa15.29■□□□□ 0.04
RPS28-201ENST00000417088 VAV1P15498 845 aa15.29■□□□□ 0.04
RPS28-201ENST00000417088 PDGFRAP16234 1089 aa15.29■□□□□ 0.04
RPS28-201ENST00000417088 C5AR1P21730 350 aa15.29■□□□□ 0.04
RPS28-201ENST00000417088 MZF1P28698 734 aaPredicted RBP15.29■□□□□ 0.04
RPS28-201ENST00000417088 NUMBP49757 651 aa15.29■□□□□ 0.04
RPS28-201ENST00000417088 PLK1P53350 603 aa15.29■□□□□ 0.04
RPS28-201ENST00000417088 PDCLQ13371 301 aa15.29■□□□□ 0.04
RPS28-201ENST00000417088 SLC12A1Q13621 1099 aa15.29■□□□□ 0.04
RPS28-201ENST00000417088 ELAVL3Q14576 367 aaKnown RBP15.29■□□□□ 0.04
RPS28-201ENST00000417088 SHBQ15464 509 aa15.29■□□□□ 0.04
RPS28-201ENST00000417088 SMAD1Q15797 465 aaKnown RBP15.29■□□□□ 0.04
RPS28-201ENST00000417088 INAVAQ3KP66 663 aa15.29■□□□□ 0.04
RPS28-201ENST00000417088 CCDC157Q569K6 752 aa15.29■□□□□ 0.04
RPS28-201ENST00000417088 SND1Q7KZF4 910 aaKnown RBP eCLIP15.29■□□□□ 0.04
RPS28-201ENST00000417088 CIR1Q86X95 450 aaPredicted RBP15.29■□□□□ 0.04
RPS28-201ENST00000417088 GATAD2AQ86YP4 633 aa15.29■□□□□ 0.04
RPS28-201ENST00000417088 CCAR2Q8N163 923 aaKnown RBP15.29■□□□□ 0.04
RPS28-201ENST00000417088 WDTC1Q8N5D0 677 aa15.29■□□□□ 0.04
RPS28-201ENST00000417088 SKA1Q96BD8 255 aa15.29■□□□□ 0.04
RPS28-201ENST00000417088 CRACR2AQ9BSW2 395 aa15.29■□□□□ 0.04
RPS28-201ENST00000417088 AASDHPPTQ9NRN7 309 aa15.29■□□□□ 0.04
RPS28-201ENST00000417088 FTSJ1Q9UET6 329 aa15.29■□□□□ 0.04
RPS28-201ENST00000417088 SLC12A6Q9UHW9 1150 aa15.29■□□□□ 0.04
RPS28-201ENST00000417088 RAXQ9Y2V3 346 aa15.29■□□□□ 0.04
RPS28-201ENST00000417088 URB1O60287 2271 aaKnown RBP15.29■□□□□ 0.04
RPS28-201ENST00000417088 ADAMTS20P59510 1910 aa15.29■□□□□ 0.04
RPS28-201ENST00000417088 FAM149AA5PLN7 773 aa15.28■□□□□ 0.04
RPS28-201ENST00000417088 GADD45BO75293 160 aaPredicted RBP15.28■□□□□ 0.04
RPS28-201ENST00000417088 IL1BP01584 269 aa15.28■□□□□ 0.04
RPS28-201ENST00000417088 CD38P28907 300 aa15.28■□□□□ 0.04
RPS28-201ENST00000417088 DRD3P35462 400 aa15.28■□□□□ 0.04
RPS28-201ENST00000417088 NNMTP40261 264 aa15.28■□□□□ 0.04
RPS28-201ENST00000417088 ADPRHP54922 357 aa15.28■□□□□ 0.04
RPS28-201ENST00000417088 CDK17Q00537 523 aa15.28■□□□□ 0.04
RPS28-201ENST00000417088 BECN1Q14457 450 aa15.28■□□□□ 0.04
RPS28-201ENST00000417088 COL28A1Q2UY09 1125 aa15.28■□□□□ 0.04
RPS28-201ENST00000417088 CXorf57Q6NSI4 855 aaKnown RBP15.28■□□□□ 0.04
RPS28-201ENST00000417088 DHRS13Q6UX07 377 aa15.28■□□□□ 0.04
RPS28-201ENST00000417088 ENOSF1Q7L5Y1 443 aa15.28■□□□□ 0.04
RPS28-201ENST00000417088 DEFB106AQ8N104 65 aa15.28■□□□□ 0.04
RPS28-201ENST00000417088 OR14C36Q8NHC7 312 aa15.28■□□□□ 0.04
RPS28-201ENST00000417088 FRS2Q8WU20 508 aa15.28■□□□□ 0.04
RPS28-201ENST00000417088 SLC2A13Q96QE2 648 aa15.28■□□□□ 0.04
RPS28-201ENST00000417088 CPXM1Q96SM3 734 aa15.28■□□□□ 0.04
RPS28-201ENST00000417088 FAM204AQ9H8W3 233 aa15.28■□□□□ 0.04
RPS28-201ENST00000417088 DDIT4Q9NX09 232 aa15.28■□□□□ 0.04
RPS28-201ENST00000417088 A0A1B0GVM2 712 aa15.27■□□□□ 0.04
RPS28-201ENST00000417088 TCAF2A6NFQ2 919 aa15.27■□□□□ 0.04
RPS28-201ENST00000417088 LATO43561 262 aa15.27■□□□□ 0.04
RPS28-201ENST00000417088 SLC2A3P11169 496 aa15.27■□□□□ 0.04
RPS28-201ENST00000417088 SLC9A1P19634 815 aa15.27■□□□□ 0.04
RPS28-201ENST00000417088 ABCB4P21439 1286 aa15.27■□□□□ 0.04
RPS28-201ENST00000417088 METAP1P53582 386 aa15.27■□□□□ 0.04
RPS28-201ENST00000417088 PPP2CBP62714 309 aa15.27■□□□□ 0.04
RPS28-201ENST00000417088 PPP2CAP67775 309 aa15.27■□□□□ 0.04
RPS28-201ENST00000417088 APBA1Q02410 837 aa15.27■□□□□ 0.04
RPS28-201ENST00000417088 SULT2A1Q06520 285 aa15.27■□□□□ 0.04
RPS28-201ENST00000417088 CYP4F3Q08477 520 aa15.27■□□□□ 0.04
RPS28-201ENST00000417088 ARHGAP44Q17R89 818 aa15.27■□□□□ 0.04
RPS28-201ENST00000417088 RABGAP1LQ5R372 815 aa15.27■□□□□ 0.04
RPS28-201ENST00000417088 TTC39BQ5VTQ0 682 aaPredicted RBP15.27■□□□□ 0.04
RPS28-201ENST00000417088 FBXL22Q6P050 247 aa15.27■□□□□ 0.04
RPS28-201ENST00000417088 TRIM65Q6PJ69 517 aa15.27■□□□□ 0.04
RPS28-201ENST00000417088 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.27■□□□□ 0.04
RPS28-201ENST00000417088 SAP25Q8TEE9 199 aa15.27■□□□□ 0.04
RPS28-201ENST00000417088 FAM131CQ96AQ9 280 aa15.27■□□□□ 0.04
RPS28-201ENST00000417088 ALG14Q96F25 216 aa15.27■□□□□ 0.04
RPS28-201ENST00000417088 SERAC1Q96JX3 654 aa15.27■□□□□ 0.04
RPS28-201ENST00000417088 GDF3Q9NR23 364 aa15.27■□□□□ 0.04
RPS28-201ENST00000417088 ASNSD1Q9NWL6 643 aa15.27■□□□□ 0.04
RPS28-201ENST00000417088 TPX2Q9ULW0 747 aaKnown RBP15.27■□□□□ 0.04
RPS28-201ENST00000417088 SYNJ2BP-COX16A0A087WUM0 186 aa15.26■□□□□ 0.03
RPS28-201ENST00000417088 TBC1D3DA0A087WVF3 549 aa15.26■□□□□ 0.03
RPS28-201ENST00000417088 TBC1D3IA0A087WXS9 549 aa15.26■□□□□ 0.03
RPS28-201ENST00000417088 TBC1D3EA0A087X179 549 aa15.26■□□□□ 0.03
RPS28-201ENST00000417088 TBC1D3KA0A087X1G2 549 aa15.26■□□□□ 0.03
RPS28-201ENST00000417088 TBC1D3FA6NER0 549 aaPredicted RBP15.26■□□□□ 0.03
RPS28-201ENST00000417088 TBC1D3LB9A6J9 549 aa15.26■□□□□ 0.03
RPS28-201ENST00000417088 CBX4O00257 560 aa15.26■□□□□ 0.03
RPS28-201ENST00000417088 PLK4O00444 970 aa15.26■□□□□ 0.03
RPS28-201ENST00000417088 FGFR1OPO95684 399 aaKnown RBP15.26■□□□□ 0.03
RPS28-201ENST00000417088 ITGAVP06756 1048 aa15.26■□□□□ 0.03
RPS28-201ENST00000417088 GLI1P08151 1106 aa15.26■□□□□ 0.03
RPS28-201ENST00000417088 TBC1D3HP0C7X1 549 aa15.26■□□□□ 0.03
RPS28-201ENST00000417088 CCR1P32246 355 aa15.26■□□□□ 0.03
RPS28-201ENST00000417088 USP8P40818 1118 aa15.26■□□□□ 0.03
RPS28-201ENST00000417088 VASPP50552 380 aaPredicted RBP15.26■□□□□ 0.03
RPS28-201ENST00000417088 IRAK1P51617 712 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms