RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 WEE1P30291 646 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 KRT6CP48668 564 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 C1QBPQ07021 282 aaKnown RBP12.26□□□□□ -0.45
UBR4-205ENST00000417040 FSTL1Q12841 308 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 NFIAQ12857 509 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 SLC45A4Q5BKX6 768 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 KCNT2Q6UVM3 1135 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 ULK2Q8IYT8 1036 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 TNS4Q8IZW8 715 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 FHDC1Q9C0D6 1143 aaPredicted RBP12.26□□□□□ -0.45
UBR4-205ENST00000417040 ANAPC2Q9UJX6 822 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 CORO1CQ9ULV4 474 aaPredicted RBP12.26□□□□□ -0.45
UBR4-205ENST00000417040 UBQLN1Q9UMX0 589 aaKnown RBP12.26□□□□□ -0.45
UBR4-205ENST00000417040 BUD23O43709 281 aaKnown RBP12.26□□□□□ -0.45
UBR4-205ENST00000417040 LSM8O95777 96 aaKnown RBP12.26□□□□□ -0.45
UBR4-205ENST00000417040 SLC2A3P11169 496 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 MUTP22033 750 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 PSMB4P28070 264 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 LY6KQ17RY6 165 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 OR7A2PQ8NGA2 310 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 OR52K1Q8NGK4 314 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 SLC4A5Q9BY07 1137 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 NUAK2Q9H093 628 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 DOLKQ9UPQ8 538 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 VPS9D1Q9Y2B5 631 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 ZC3H11AO75152 810 aaKnown RBP eCLIP12.25□□□□□ -0.45
UBR4-205ENST00000417040 IL6P05231 212 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 LAMTOR4Q0VGL1 99 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 IL17AQ16552 155 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 SAMD7Q7Z3H4 446 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 HIPK1Q86Z02 1210 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 FNIP1Q8TF40 1166 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 SLITRK1Q96PX8 696 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 NPAS2Q99743 824 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 C12orf65Q9H3J6 166 aaKnown RBP12.25□□□□□ -0.45
UBR4-205ENST00000417040 TCRBV5S4A2TA0A5A2 114 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 B3GAT3O94766 335 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 SLITRK3O94933 977 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 EIF2S1P05198 315 aaKnown RBP12.25□□□□□ -0.45
UBR4-205ENST00000417040 FYNP06241 537 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 MBL2P11226 248 aaPredicted RBP12.25□□□□□ -0.45
UBR4-205ENST00000417040 CCR1P32246 355 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 RTL3Q8N8U3 475 aaKnown RBP12.25□□□□□ -0.45
UBR4-205ENST00000417040 SERAC1Q96JX3 654 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 FDXACB1Q9BRP7 624 aaPredicted RBP12.25□□□□□ -0.45
UBR4-205ENST00000417040 PXMP2Q9NR77 195 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 SLC17A7Q9P2U7 560 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 EGFL7Q9UHF1 273 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 DGKBQ9Y6T7 804 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 ZMYM2Q9UBW7 1377 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 PEX11AO75192 247 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 SEC24AO95486 1093 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 SLC11A2P49281 568 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 NEK3P51956 506 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 ROR2Q01974 943 aaKnown RBP12.25□□□□□ -0.45
UBR4-205ENST00000417040 ITPK1Q13572 414 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 TMEM119Q4V9L6 283 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 C6orf52Q5T4I8 152 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 C10orf107Q8IVU9 208 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 METTL6Q8TCB7 284 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 PHACTR1Q9C0D0 580 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 PNPOQ9NVS9 261 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 OGDHLQ9ULD0 1010 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 FAM50BQ9Y247 325 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 R3HDM2Q9Y2K5 976 aaKnown RBP12.25□□□□□ -0.45
UBR4-205ENST00000417040 CENPXA8MT69 81 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 DCDC2CA8MYV0 355 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 PSMD12O00232 456 aaPredicted RBP12.25□□□□□ -0.45
UBR4-205ENST00000417040 NOS3P29474 1203 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 PNPLA4P41247 253 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 GRIA4P48058 902 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 PFKFB4Q16877 469 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 SAMD4BQ5PRF9 694 aaKnown RBP12.25□□□□□ -0.45
UBR4-205ENST00000417040 MACC1Q6ZN28 852 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 CYP4Z2PQ8N1L4 340 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 ZNF483Q8TF39 744 aaPredicted RBP12.25□□□□□ -0.45
UBR4-205ENST00000417040 ART4Q93070 314 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 SLC35C1Q96A29 364 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 BLOC1S4Q9NUP1 217 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 EURLQ9NYK6 297 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 ANKRD6Q9Y2G4 727 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 IDH2P48735 452 aaKnown RBP12.25□□□□□ -0.45
UBR4-205ENST00000417040 BST2Q10589 180 aaKnown RBP12.25□□□□□ -0.45
UBR4-205ENST00000417040 CDH17Q12864 832 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 FAM45AQ8TCE6 357 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 EMID1Q96A84 441 aaPredicted RBP12.25□□□□□ -0.45
UBR4-205ENST00000417040 MAGEB10Q96LZ2 347 aaPredicted RBP12.25□□□□□ -0.45
UBR4-205ENST00000417040 TDRKHQ9Y2W6 561 aaKnown RBP12.25□□□□□ -0.45
UBR4-205ENST00000417040 AP4B1Q9Y6B7 739 aa12.25□□□□□ -0.45
UBR4-205ENST00000417040 SMIM31A0A1B0GVY4 71 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 ENTPD3O75355 529 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 KCNH1O95259 989 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 CRABP2P29373 138 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 PEX6Q13608 980 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 KRT77Q7Z794 578 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 TMEM132CQ8N3T6 1108 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 RCN3Q96D15 328 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 NUDT5Q9UKK9 219 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 AK5Q9Y6K8 562 aa12.24□□□□□ -0.45
UBR4-205ENST00000417040 CASZ1Q86V15 1759 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms