RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 ZSCAN18Q8TBC5 510 aaPredicted RBP10.25□□□□□ -0.77
DDB1-202ENST00000414411 EPS8L3Q8TE67 593 aaKnown RBP10.25□□□□□ -0.77
DDB1-202ENST00000414411 WBP2Q969T9 261 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 RBM41Q96IZ5 413 aaKnown RBP10.25□□□□□ -0.77
DDB1-202ENST00000414411 ASB16Q96NS5 453 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 PEBP4Q96S96 227 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 SMG9Q9H0W8 520 aaKnown RBP10.25□□□□□ -0.77
DDB1-202ENST00000414411 RASSF4Q9H2L5 321 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 CDC42EP4Q9H3Q1 356 aaKnown RBP10.25□□□□□ -0.77
DDB1-202ENST00000414411 WDCPQ9H6R7 721 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 ARHGEF38Q9NXL2 777 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 USP18Q9UMW8 372 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 CPQQ9Y646 472 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 ZFP37Q9Y6Q3 630 aaPredicted RBP10.25□□□□□ -0.77
DDB1-202ENST00000414411 TRIOO75962 3097 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 SYNJ2BP-COX16A0A087WUM0 186 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 TLDC2A0PJX2 215 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 SMIM23A6NLE4 172 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 SLC2A3P11169 496 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 DESP17661 470 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 CCR1P32246 355 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 CHKAP35790 457 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 MMP13P45452 471 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 ITGA8P53708 1063 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 PPARDQ03181 441 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 SCAPQ12770 1279 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 TRIP13Q15645 432 aaPredicted RBP10.25□□□□□ -0.77
DDB1-202ENST00000414411 BOLA3Q53S33 107 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 TNFAIP8L3Q5GJ75 292 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 BRMS1LQ5PSV4 323 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 ARTNQ5T4W7 220 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 LRRC38Q5VT99 294 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 CCDC185Q8N715 623 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 UHMK1Q8TAS1 419 aaKnown RBP10.25□□□□□ -0.77
DDB1-202ENST00000414411 RIN3Q8TB24 985 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 RAPGEF5Q92565 580 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 SMARCD2Q92925 531 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 AZIN2Q96A70 460 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 NTAN1Q96AB6 310 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 CENPTQ96BT3 561 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 PLD4Q96BZ4 506 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 LRRC3BQ96PB8 259 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 STMN4Q9H169 189 aaPredicted RBP10.25□□□□□ -0.77
DDB1-202ENST00000414411 SMPD4Q9NXE4 827 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 COX16Q9P0S2 106 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 PCSK1NQ9UHG2 260 aa10.25□□□□□ -0.77
DDB1-202ENST00000414411 LEFTY2O00292 366 aa10.24□□□□□ -0.77
DDB1-202ENST00000414411 RASGRF2O14827 1237 aa10.24□□□□□ -0.77
DDB1-202ENST00000414411 KRT1P04264 644 aa10.24□□□□□ -0.77
DDB1-202ENST00000414411 HMBSP08397 361 aa10.24□□□□□ -0.77
DDB1-202ENST00000414411 FCARP24071 287 aa10.24□□□□□ -0.77
DDB1-202ENST00000414411 ADCY8P40145 1251 aa10.24□□□□□ -0.77
DDB1-202ENST00000414411 CETN2P41208 172 aa10.24□□□□□ -0.77
DDB1-202ENST00000414411 AIF1P55008 147 aa10.24□□□□□ -0.77
DDB1-202ENST00000414411 IFI35P80217 286 aaPredicted RBP10.24□□□□□ -0.77
DDB1-202ENST00000414411 AUHQ13825 339 aaKnown RBP10.24□□□□□ -0.77
DDB1-202ENST00000414411 SMAD2Q15796 467 aaKnown RBP10.24□□□□□ -0.77
DDB1-202ENST00000414411 ERMARDQ5T6L9 678 aa10.24□□□□□ -0.77
DDB1-202ENST00000414411 NUGGCQ68CJ6 796 aa10.24□□□□□ -0.77
DDB1-202ENST00000414411 SCYL2Q6P3W7 929 aa10.24□□□□□ -0.77
DDB1-202ENST00000414411 Q6ZNB5 142 aa10.24□□□□□ -0.77
DDB1-202ENST00000414411 HTR3DQ70Z44 454 aa10.24□□□□□ -0.77
DDB1-202ENST00000414411 POLNQ7Z5Q5 900 aa10.24□□□□□ -0.77
DDB1-202ENST00000414411 PSTKQ8IV42 348 aaKnown RBP10.24□□□□□ -0.77
DDB1-202ENST00000414411 UNC45BQ8IWX7 931 aa10.24□□□□□ -0.77
DDB1-202ENST00000414411 RCOR2Q8IZ40 523 aa10.24□□□□□ -0.77
DDB1-202ENST00000414411 CCDC89Q8N998 374 aa10.24□□□□□ -0.77
DDB1-202ENST00000414411 RSPRY1Q96DX4 576 aa10.24□□□□□ -0.77
DDB1-202ENST00000414411 MAGEB5Q9BZ81 275 aa10.24□□□□□ -0.77
DDB1-202ENST00000414411 ROPN1BQ9BZX4 212 aaPredicted RBP10.24□□□□□ -0.77
DDB1-202ENST00000414411 TKTL2Q9H0I9 626 aa10.24□□□□□ -0.77
DDB1-202ENST00000414411 ROPN1Q9HAT0 212 aaPredicted RBP10.24□□□□□ -0.77
DDB1-202ENST00000414411 TMPRSS4Q9NRS4 437 aa10.24□□□□□ -0.77
DDB1-202ENST00000414411 KLHL11Q9NVR0 708 aa10.24□□□□□ -0.77
DDB1-202ENST00000414411 EPS15L1Q9UBC2 864 aa10.24□□□□□ -0.77
DDB1-202ENST00000414411 GGA2Q9UJY4 613 aa10.24□□□□□ -0.77
DDB1-202ENST00000414411 STOML2Q9UJZ1 356 aa10.24□□□□□ -0.77
DDB1-202ENST00000414411 FZD10Q9ULW2 581 aa10.24□□□□□ -0.77
DDB1-202ENST00000414411 MYO10Q9HD67 2058 aa10.24□□□□□ -0.77
DDB1-202ENST00000414411 C5orf60A6NFR6 353 aa10.23□□□□□ -0.77
DDB1-202ENST00000414411 PI4K2BG5E9Z4 385 aa10.23□□□□□ -0.77
DDB1-202ENST00000414411 PRPSAP2O60256 369 aa10.23□□□□□ -0.77
DDB1-202ENST00000414411 ACSL3O95573 720 aa10.23□□□□□ -0.77
DDB1-202ENST00000414411 TTC4O95801 387 aa10.23□□□□□ -0.77
DDB1-202ENST00000414411 PTPN7P35236 360 aa10.23□□□□□ -0.77
DDB1-202ENST00000414411 VIPR2P41587 438 aa10.23□□□□□ -0.77
DDB1-202ENST00000414411 SLCO1A2P46721 670 aa10.23□□□□□ -0.77
DDB1-202ENST00000414411 VPS41P49754 854 aa10.23□□□□□ -0.77
DDB1-202ENST00000414411 MLLT6P55198 1093 aaPredicted RBP10.23□□□□□ -0.77
DDB1-202ENST00000414411 ZNF77Q15935 545 aa10.23□□□□□ -0.77
DDB1-202ENST00000414411 HADHQ16836 314 aaKnown RBP10.23□□□□□ -0.77
DDB1-202ENST00000414411 ATP13A4Q4VNC1 1196 aa10.23□□□□□ -0.77
DDB1-202ENST00000414411 MICALCLQ6ZW33 695 aa10.23□□□□□ -0.77
DDB1-202ENST00000414411 OTOP3Q7RTS5 596 aa10.23□□□□□ -0.77
DDB1-202ENST00000414411 CELF5Q8N6W0 485 aaKnown RBP10.23□□□□□ -0.77
DDB1-202ENST00000414411 KIAA1958Q8N8K9 716 aa10.23□□□□□ -0.77
DDB1-202ENST00000414411 BBOF1Q8ND07 529 aa10.23□□□□□ -0.77
DDB1-202ENST00000414411 MDM1Q8TC05 714 aa10.23□□□□□ -0.77
DDB1-202ENST00000414411 SH3RF2Q8TEC5 729 aa10.23□□□□□ -0.77
DDB1-202ENST00000414411 TEKT4Q8WW24 435 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms