RNA–Protein interactions for RNA: ENST00000413985.1

CRIM1-202, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-202ENST00000413985 SARDHQ9UL12 918 aa11.31□□□□□ -0.6
CRIM1-202ENST00000413985 TPX2Q9ULW0 747 aaKnown RBP11.31□□□□□ -0.6
CRIM1-202ENST00000413985 DMTF1Q9Y222 760 aa11.31□□□□□ -0.6
CRIM1-202ENST00000413985 USP3Q9Y6I4 520 aa11.31□□□□□ -0.6
CRIM1-202ENST00000413985 PRAMEF33A0A0G2JMD5 474 aa11.3□□□□□ -0.6
CRIM1-202ENST00000413985 PRAMEF10O60809 474 aa11.3□□□□□ -0.6
CRIM1-202ENST00000413985 KIF20AO95235 890 aa11.3□□□□□ -0.6
CRIM1-202ENST00000413985 ADH1BP00325 375 aa11.3□□□□□ -0.6
CRIM1-202ENST00000413985 ELAVL4P26378 380 aaKnown RBP11.3□□□□□ -0.6
CRIM1-202ENST00000413985 DCTP40126 519 aa11.3□□□□□ -0.6
CRIM1-202ENST00000413985 CD97P48960 835 aa11.3□□□□□ -0.6
CRIM1-202ENST00000413985 CASP4P49662 377 aa11.3□□□□□ -0.6
CRIM1-202ENST00000413985 SPIDRQ14159 915 aa11.3□□□□□ -0.6
CRIM1-202ENST00000413985 ZNF699Q32M78 642 aa11.3□□□□□ -0.6
CRIM1-202ENST00000413985 AGBL4Q5VU57 503 aa11.3□□□□□ -0.6
CRIM1-202ENST00000413985 OR6B2Q6IFH4 312 aa11.3□□□□□ -0.6
CRIM1-202ENST00000413985 BORAQ6PGQ7 559 aa11.3□□□□□ -0.6
CRIM1-202ENST00000413985 RSRC2Q7L4I2 434 aaKnown RBP11.3□□□□□ -0.6
CRIM1-202ENST00000413985 RAB11FIP2Q7L804 512 aa11.3□□□□□ -0.6
CRIM1-202ENST00000413985 ZSCAN1Q8NBB4 408 aa11.3□□□□□ -0.6
CRIM1-202ENST00000413985 SPATA20Q8TB22 786 aa11.3□□□□□ -0.6
CRIM1-202ENST00000413985 PTPRN2Q92932 1015 aa11.3□□□□□ -0.6
CRIM1-202ENST00000413985 SYAP1Q96A49 352 aaPredicted RBP11.3□□□□□ -0.6
CRIM1-202ENST00000413985 PLD4Q96BZ4 506 aa11.3□□□□□ -0.6
CRIM1-202ENST00000413985 SLC12A9Q9BXP2 914 aa11.3□□□□□ -0.6
CRIM1-202ENST00000413985 EVA1BQ9NVM1 165 aa11.3□□□□□ -0.6
CRIM1-202ENST00000413985 STIM2Q9P246 746 aa11.3□□□□□ -0.6
CRIM1-202ENST00000413985 SFMBT1Q9UHJ3 866 aa11.3□□□□□ -0.6
CRIM1-202ENST00000413985 KLF15Q9UIH9 416 aa11.3□□□□□ -0.6
CRIM1-202ENST00000413985 STRIP2Q9ULQ0 834 aa11.3□□□□□ -0.6
CRIM1-202ENST00000413985 ERVW-1Q9UQF0 538 aa11.3□□□□□ -0.6
CRIM1-202ENST00000413985 PCDHB13Q9Y5F0 798 aa11.3□□□□□ -0.6
CRIM1-202ENST00000413985 EDDM13A0A1B0GTR0 161 aa11.29□□□□□ -0.6
CRIM1-202ENST00000413985 TARSL2A2RTX5 802 aaKnown RBP11.29□□□□□ -0.6
CRIM1-202ENST00000413985 NEMP2A6NFY4 417 aa11.29□□□□□ -0.6
CRIM1-202ENST00000413985 MSI1O43347 362 aaKnown RBP11.29□□□□□ -0.6
CRIM1-202ENST00000413985 SEMA7AO75326 666 aa11.29□□□□□ -0.6
CRIM1-202ENST00000413985 KRT7P08729 469 aa11.29□□□□□ -0.6
CRIM1-202ENST00000413985 SLC6A4P31645 630 aa11.29□□□□□ -0.6
CRIM1-202ENST00000413985 ATICP31939 592 aa11.29□□□□□ -0.6
CRIM1-202ENST00000413985 HOXD13P35453 343 aa11.29□□□□□ -0.6
CRIM1-202ENST00000413985 ETV5P41161 510 aa11.29□□□□□ -0.6
CRIM1-202ENST00000413985 PSEN1P49768 467 aa11.29□□□□□ -0.6
CRIM1-202ENST00000413985 STK19P49842 368 aaPredicted RBP11.29□□□□□ -0.6
CRIM1-202ENST00000413985 MLLT10P55197 1068 aa11.29□□□□□ -0.6
CRIM1-202ENST00000413985 TAS2R38P59533 333 aa11.29□□□□□ -0.6
CRIM1-202ENST00000413985 CYP24A1Q07973 514 aa11.29□□□□□ -0.6
CRIM1-202ENST00000413985 ARID5BQ14865 1188 aa11.29□□□□□ -0.6
CRIM1-202ENST00000413985 PSMD6Q15008 389 aa11.29□□□□□ -0.6
CRIM1-202ENST00000413985 NR0B2Q15466 257 aa11.29□□□□□ -0.6
CRIM1-202ENST00000413985 SNRNP35Q16560 246 aaKnown RBP11.29□□□□□ -0.6
CRIM1-202ENST00000413985 BMT2Q1RMZ1 405 aa11.29□□□□□ -0.6
CRIM1-202ENST00000413985 SETMARQ53H47 684 aaPredicted RBP11.29□□□□□ -0.6
CRIM1-202ENST00000413985 FSCBQ5H9T9 825 aa11.29□□□□□ -0.6
CRIM1-202ENST00000413985 ZNF667Q5HYK9 610 aa11.29□□□□□ -0.6
CRIM1-202ENST00000413985 ARL6IP4Q66PJ3 421 aaKnown RBP11.29□□□□□ -0.6
CRIM1-202ENST00000413985 GCNT7Q6ZNI0 430 aa11.29□□□□□ -0.6
CRIM1-202ENST00000413985 TICAM1Q8IUC6 712 aa11.29□□□□□ -0.6
CRIM1-202ENST00000413985 MFN1Q8IWA4 741 aa11.29□□□□□ -0.6
CRIM1-202ENST00000413985 CRYBG2Q8N1P7 616 aa11.29□□□□□ -0.6
CRIM1-202ENST00000413985 PLEKHO2Q8TD55 490 aa11.29□□□□□ -0.6
CRIM1-202ENST00000413985 RPL10LQ96L21 214 aaKnown RBP11.29□□□□□ -0.6
CRIM1-202ENST00000413985 AK8Q96MA6 479 aa11.29□□□□□ -0.6
CRIM1-202ENST00000413985 PRICKLE1Q96MT3 831 aaPredicted RBP11.29□□□□□ -0.6
CRIM1-202ENST00000413985 CCDC3Q9BQI4 270 aa11.29□□□□□ -0.6
CRIM1-202ENST00000413985 SEPT10Q9P0V9 454 aa11.29□□□□□ -0.6
CRIM1-202ENST00000413985 RABGEF1Q9UJ41 708 aa11.29□□□□□ -0.6
CRIM1-202ENST00000413985 ITIH6Q6UXX5 1313 aa11.29□□□□□ -0.6
CRIM1-202ENST00000413985 NTN3O00634 580 aaPredicted RBP11.28□□□□□ -0.6
CRIM1-202ENST00000413985 SLC26A4O43511 780 aa11.28□□□□□ -0.6
CRIM1-202ENST00000413985 RNGTTO60942 597 aaKnown RBP11.28□□□□□ -0.6
CRIM1-202ENST00000413985 PHACTR2O75167 634 aa11.28□□□□□ -0.6
CRIM1-202ENST00000413985 IDEP14735 1019 aa11.28□□□□□ -0.6
CRIM1-202ENST00000413985 GAP43P17677 238 aa11.28□□□□□ -0.6
CRIM1-202ENST00000413985 GNLYP22749 145 aa11.28□□□□□ -0.6
CRIM1-202ENST00000413985 YWHAGP61981 247 aaKnown RBP eCLIP11.28□□□□□ -0.6
CRIM1-202ENST00000413985 CNTN1Q12860 1018 aa11.28□□□□□ -0.6
CRIM1-202ENST00000413985 PIK3R6Q5UE93 754 aa11.28□□□□□ -0.6
CRIM1-202ENST00000413985 SPOPLQ6IQ16 392 aa11.28□□□□□ -0.6
CRIM1-202ENST00000413985 DSG4Q86SJ6 1040 aa11.28□□□□□ -0.6
CRIM1-202ENST00000413985 DTX1Q86Y01 620 aa11.28□□□□□ -0.6
CRIM1-202ENST00000413985 SLC35F3Q8IY50 421 aa11.28□□□□□ -0.6
CRIM1-202ENST00000413985 FAM184AQ8NB25 1140 aa11.28□□□□□ -0.6
CRIM1-202ENST00000413985 TPCN2Q8NHX9 752 aa11.28□□□□□ -0.6
CRIM1-202ENST00000413985 SSC4DQ8WTU2 575 aa11.28□□□□□ -0.6
CRIM1-202ENST00000413985 CYFIP2Q96F07 1278 aa11.28□□□□□ -0.6
CRIM1-202ENST00000413985 CDK5RAP1Q96SZ6 601 aaKnown RBP11.28□□□□□ -0.6
CRIM1-202ENST00000413985 KDM4CQ9H3R0 1056 aa11.28□□□□□ -0.6
CRIM1-202ENST00000413985 VRTNQ9H8Y1 702 aa11.28□□□□□ -0.6
CRIM1-202ENST00000413985 PREBQ9HCU5 417 aa11.28□□□□□ -0.6
CRIM1-202ENST00000413985 PNPLA8Q9NP80 782 aa11.28□□□□□ -0.6
CRIM1-202ENST00000413985 OLFML3Q9NRN5 406 aa11.28□□□□□ -0.6
CRIM1-202ENST00000413985 STOML2Q9UJZ1 356 aa11.28□□□□□ -0.6
CRIM1-202ENST00000413985 MED13Q9UHV7 2174 aa11.27□□□□□ -0.6
CRIM1-202ENST00000413985 VPS37CA5D8V6 355 aaPredicted RBP11.27□□□□□ -0.61
CRIM1-202ENST00000413985 KIAA0391O15091 583 aaKnown RBP11.27□□□□□ -0.61
CRIM1-202ENST00000413985 CLIC2O15247 247 aa11.27□□□□□ -0.61
CRIM1-202ENST00000413985 NVLO15381 856 aaKnown RBP11.27□□□□□ -0.61
CRIM1-202ENST00000413985 VNN1O95497 513 aa11.27□□□□□ -0.61
CRIM1-202ENST00000413985 ASLP04424 464 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms