RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 SSU72P8A0A1W2PR75 194 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 TCRBV21S2A2A0A5A6 115 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 FAM170BA6NMN3 283 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 ADARB2-AS1A8MUL3 147 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 ZNF185O15231 689 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 SIX3O95343 332 aaPredicted RBP6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 LARGE1O95461 756 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 GNAI2P04899 355 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 GRPP07492 148 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 MMP2P08253 660 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 NCF1P14598 390 aaPredicted RBP6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 PRLRP16471 622 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 SMPD1P17405 629 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 DDCP20711 480 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 CDH3P22223 829 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 SFPQP23246 707 aaKnown RBP eCLIP6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 ADH6P28332 368 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 HOXA10P31260 410 aaPredicted RBP6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 KHKP50053 298 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 MFAP4P55083 255 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 PCBP3P57721 371 aaKnown RBP6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 HAND2P61296 217 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 UFM1P61960 85 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 CYP4F8P98187 520 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 SOX4Q06945 474 aaPredicted RBP6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 SF3A3Q12874 501 aaKnown RBP eCLIP6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 TRDNQ13061 729 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 FRG1Q14331 258 aaKnown RBP6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 SLC9B1Q4ZJI4 515 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 PRRT3Q5FWE3 981 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 KCNT1Q5JUK3 1230 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 STXBP5Q5T5C0 1151 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 MROH9Q5TGP6 573 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 GKAP1Q5VSY0 366 aaPredicted RBP6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 SPRYD7Q5W111 196 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 LRIG3Q6UXM1 1119 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 RBM43Q6ZSC3 357 aaKnown RBP6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 Q6ZVL8 140 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 RFX6Q8HWS3 928 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 TICAM1Q8IUC6 712 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 MYOCDQ8IZQ8 938 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 CYP4X1Q8N118 509 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 MINDY1Q8N5J2 469 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 PI4KAP1Q8N8J0 262 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 BBOF1Q8ND07 529 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 SLC16A10Q8TF71 515 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 RAPGEF4Q8WZA2 1011 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 RAPGEF5Q92565 580 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 HPS1Q92902 700 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 SMARCE1Q969G3 411 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 NAF1Q96HR8 494 aaKnown RBP6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 WDFY2Q96P53 400 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 UHRF1Q96T88 793 aaPredicted RBP6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 PIMREGQ9BSJ6 248 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 THUMPD2Q9BTF0 503 aaKnown RBP6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 NFKBIZQ9BYH8 718 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 PUS3Q9BZE2 481 aaKnown RBP6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 TINAGL1Q9GZM7 467 aaPredicted RBP6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 RIBC2Q9H4K1 309 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 COQ10BQ9H8M1 238 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 BARX1Q9HBU1 254 aaPredicted RBP6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 FSCN3Q9NQT6 498 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 LIN7CQ9NUP9 197 aaKnown RBP6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 PSD3Q9NYI0 1048 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 MPP6Q9NZW5 540 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 PIM2Q9P1W9 311 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 SPASTQ9UBP0 616 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 USP21Q9UK80 565 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 TLK1Q9UKI8 766 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 TCFL5Q9UL49 500 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 PADI1Q9ULC6 663 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 NFU1Q9UMS0 254 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 TNFSF13BQ9Y275 285 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 NAALAD2Q9Y3Q0 740 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 PLEKHM1Q9Y4G2 1056 aa6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 PPRC1Q5VV67 1664 aaKnown RBP6.06□□□□□ -1.44
CBX1P3-201ENST00000413296 XKRY2A2RUG3 117 aa6.05□□□□□ -1.44
CBX1P3-201ENST00000413296 DENND3A2RUS2 1198 aa6.05□□□□□ -1.44
CBX1P3-201ENST00000413296 H7C4K7 107 aa6.05□□□□□ -1.44
CBX1P3-201ENST00000413296 ACOT7O00154 380 aa6.05□□□□□ -1.44
CBX1P3-201ENST00000413296 RASGRF2O14827 1237 aa6.05□□□□□ -1.44
CBX1P3-201ENST00000413296 TO15178 435 aa6.05□□□□□ -1.44
CBX1P3-201ENST00000413296 GRM6O15303 877 aa6.05□□□□□ -1.44
CBX1P3-201ENST00000413296 RNF113AO15541 343 aaKnown RBP6.05□□□□□ -1.44
CBX1P3-201ENST00000413296 SPOPO43791 374 aa6.05□□□□□ -1.44
CBX1P3-201ENST00000413296 TADA2AO75478 443 aa6.05□□□□□ -1.44
CBX1P3-201ENST00000413296 SPAG6O75602 509 aa6.05□□□□□ -1.44
CBX1P3-201ENST00000413296 AKR7A3O95154 331 aa6.05□□□□□ -1.44
CBX1P3-201ENST00000413296 FUCA1P04066 466 aa6.05□□□□□ -1.44
CBX1P3-201ENST00000413296 CFIP05156 583 aa6.05□□□□□ -1.44
CBX1P3-201ENST00000413296 CYC1P08574 325 aa6.05□□□□□ -1.44
CBX1P3-201ENST00000413296 GNAI3P08754 354 aa6.05□□□□□ -1.44
CBX1P3-201ENST00000413296 POLR2MP0CAP2 368 aa6.05□□□□□ -1.44
CBX1P3-201ENST00000413296 CCDC192P0DO97 292 aa6.05□□□□□ -1.44
CBX1P3-201ENST00000413296 UROSP10746 265 aa6.05□□□□□ -1.44
CBX1P3-201ENST00000413296 COX7A2P14406 83 aa6.05□□□□□ -1.44
CBX1P3-201ENST00000413296 ZFXP17010 805 aaPredicted RBP6.05□□□□□ -1.44
CBX1P3-201ENST00000413296 TCEA1P23193 301 aaKnown RBP6.05□□□□□ -1.44
CBX1P3-201ENST00000413296 CD68P34810 354 aaPredicted RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms