RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 CASP5P51878 434 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 ASIC1P78348 528 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 AMPD3Q01432 767 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 TWF1Q12792 350 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 TCF15Q12870 199 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 KLF10Q13118 480 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 GPR17Q13304 367 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 PLD1Q13393 1074 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 MYBPC2Q14324 1141 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 SLC5A9Q2M3M2 681 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 DNAJC21Q5F1R6 531 aaKnown RBP5.61□□□□□ -1.51
LINC00342-201ENST00000412393 PRR31Q5SQ13 230 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 CYP4A22Q5TCH4 519 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 RESP18Q5W5W9 173 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 SPECC1LQ69YQ0 1117 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 IQCEQ6IPM2 695 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 PARM1Q6UWI2 310 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 ITIH6Q6UXX5 1313 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 DNAJC14Q6Y2X3 702 aaPredicted RBP5.61□□□□□ -1.51
LINC00342-201ENST00000412393 ETV3LQ6ZN32 361 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 MMS22LQ6ZRQ5 1243 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 PDZD4Q76G19 769 aaPredicted RBP5.61□□□□□ -1.51
LINC00342-201ENST00000412393 ERMP1Q7Z2K6 904 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 METTL23Q86XA0 190 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 SPATS2Q86XZ4 545 aaKnown RBP5.61□□□□□ -1.51
LINC00342-201ENST00000412393 NT5DC4Q86YG4 428 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 BRSK2Q8IWQ3 736 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 ZSWIM2Q8NEG5 633 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 PATJQ8NI35 1801 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 NOC3LQ8WTT2 800 aaKnown RBP5.61□□□□□ -1.51
LINC00342-201ENST00000412393 SAAL1Q96ER3 474 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 MCRS1Q96EZ8 462 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 PGLYRP2Q96PD5 576 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 EIF3CQ99613 913 aaKnown RBP5.61□□□□□ -1.51
LINC00342-201ENST00000412393 BAG1Q99933 345 aaPredicted RBP5.61□□□□□ -1.51
LINC00342-201ENST00000412393 KXD1Q9BQD3 176 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 RTP3Q9BQQ7 232 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 FAM213AQ9BRX8 229 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 RPP25Q9BUL9 199 aaKnown RBP5.61□□□□□ -1.51
LINC00342-201ENST00000412393 FGFBP2Q9BYJ0 223 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 TRIM9Q9C026 710 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 ANAPC1Q9H1A4 1944 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 PCIF1Q9H4Z3 704 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 TMEM206Q9H813 350 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 ANKZF1Q9H8Y5 726 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 GP6Q9HCN6 339 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 SLC2A4RGQ9NR83 387 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 KBTBD4Q9NVX7 518 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.61□□□□□ -1.51
LINC00342-201ENST00000412393 CEP72Q9P209 647 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 C11orf21Q9P2W6 132 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.61□□□□□ -1.51
LINC00342-201ENST00000412393 LCMT1Q9UIC8 334 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 YIPF1Q9Y548 306 aa5.61□□□□□ -1.51
LINC00342-201ENST00000412393 PTPRDP23468 1912 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 MTMR11A4FU01 709 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 KPNA7A9QM74 516 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 H0Y858 1186 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 H3BQF6 201 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 CYB561D2O14569 222 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 KIAA0391O15091 583 aaKnown RBP5.6□□□□□ -1.51
LINC00342-201ENST00000412393 MUSKO15146 869 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 POLR3GO15318 223 aaPredicted RBP5.6□□□□□ -1.51
LINC00342-201ENST00000412393 POLR2DO15514 142 aaKnown RBP5.6□□□□□ -1.51
LINC00342-201ENST00000412393 PI15O43692 258 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 ECI2O75521 394 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 VNN2O95498 520 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 C8BP07358 591 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 CCDC175P0C221 793 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 GJA1P17302 382 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 PNPLA4P41247 253 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 CCR2P41597 374 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 ALDH1A3P47895 512 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 GTF2A1P52655 376 aaPredicted RBP5.6□□□□□ -1.51
LINC00342-201ENST00000412393 EPHA5P54756 1037 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 GNG11P61952 73 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 GPC5P78333 572 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 TFAMQ00059 246 aaKnown RBP5.6□□□□□ -1.51
LINC00342-201ENST00000412393 SV2CQ496J9 727 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 TTC31Q49AM3 519 aaPredicted RBP5.6□□□□□ -1.51
LINC00342-201ENST00000412393 WSCD1Q658N2 575 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 CENPPQ6IPU0 288 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 CNNM4Q6P4Q7 775 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 LRRC31Q6UY01 552 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 GBP6Q6ZN66 633 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 CCDC91Q7Z6B0 441 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 YTHDF3Q7Z739 585 aaKnown RBP5.6□□□□□ -1.51
LINC00342-201ENST00000412393 CCDC105Q8IYK2 499 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 THEM5Q8N1Q8 247 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 GPD1LQ8N335 351 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 TAB3Q8N5C8 712 aaPredicted RBP5.6□□□□□ -1.51
LINC00342-201ENST00000412393 ATAD1Q8NBU5 361 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 LEMD2Q8NC56 503 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 NEK11Q8NG66 645 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 ATOH1Q92858 354 aaPredicted RBP5.6□□□□□ -1.51
LINC00342-201ENST00000412393 HPS3Q969F9 1004 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 TCEAL4Q96EI5 215 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 SHDQ96IW2 340 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 ZNF560Q96MR9 790 aa5.6□□□□□ -1.51
LINC00342-201ENST00000412393 WDR24Q96S15 920 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms