RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 ATP11AP98196 1134 aa17.9■□□□□ 0.46
HSPG2-204ENST00000412328 OGDHQ02218 1023 aa17.9■□□□□ 0.46
HSPG2-204ENST00000412328 NRG1Q02297 640 aaPredicted RBP17.9■□□□□ 0.46
HSPG2-204ENST00000412328 HGSNATQ68CP4 663 aa17.9■□□□□ 0.46
HSPG2-204ENST00000412328 SLC36A4Q6YBV0 504 aa17.9■□□□□ 0.46
HSPG2-204ENST00000412328 ARMCX6Q7L4S7 300 aa17.9■□□□□ 0.46
HSPG2-204ENST00000412328 CYP2U1Q7Z449 544 aa17.9■□□□□ 0.46
HSPG2-204ENST00000412328 CACUL1Q86Y37 369 aa17.9■□□□□ 0.46
HSPG2-204ENST00000412328 MCOLN2Q8IZK6 566 aa17.9■□□□□ 0.46
HSPG2-204ENST00000412328 FRS2Q8WU20 508 aa17.9■□□□□ 0.46
HSPG2-204ENST00000412328 HAPLN3Q96S86 360 aa17.9■□□□□ 0.46
HSPG2-204ENST00000412328 RSPH9Q9H1X1 276 aaPredicted RBP17.9■□□□□ 0.46
HSPG2-204ENST00000412328 HAUS4Q9H6D7 363 aa17.9■□□□□ 0.46
HSPG2-204ENST00000412328 FBRSQ9HAH7 460 aa17.9■□□□□ 0.46
HSPG2-204ENST00000412328 TMEM51Q9NW97 253 aa17.9■□□□□ 0.46
HSPG2-204ENST00000412328 PLA2G4CQ9UP65 541 aa17.9■□□□□ 0.46
HSPG2-204ENST00000412328 CNOT1A5YKK6 2376 aaKnown RBP17.89■□□□□ 0.45
HSPG2-204ENST00000412328 SIGLEC16A6NMB1 481 aa17.89■□□□□ 0.45
HSPG2-204ENST00000412328 TTC34A8MYJ7 566 aa17.89■□□□□ 0.45
HSPG2-204ENST00000412328 E9PAM4 449 aa17.89■□□□□ 0.45
HSPG2-204ENST00000412328 DDX3XO00571 662 aaKnown RBP eCLIP17.89■□□□□ 0.451e-11■□□□□ 10.6
HSPG2-204ENST00000412328 AP5Z1O43299 807 aa17.89■□□□□ 0.45
HSPG2-204ENST00000412328 CCP110O43303 1012 aa17.89■□□□□ 0.45
HSPG2-204ENST00000412328 FOXD2O60548 495 aaPredicted RBP17.89■□□□□ 0.45
HSPG2-204ENST00000412328 SIN3BO75182 1162 aa17.89■□□□□ 0.45
HSPG2-204ENST00000412328 SERPINC1P01008 464 aa17.89■□□□□ 0.45
HSPG2-204ENST00000412328 KRT3P12035 628 aa17.89■□□□□ 0.45
HSPG2-204ENST00000412328 ITPKAP23677 461 aa17.89■□□□□ 0.45
HSPG2-204ENST00000412328 SDC4P31431 198 aa17.89■□□□□ 0.45
HSPG2-204ENST00000412328 LIMK1P53667 647 aa17.89■□□□□ 0.45
HSPG2-204ENST00000412328 RPS14P62263 151 aaKnown RBP17.89■□□□□ 0.45
HSPG2-204ENST00000412328 RPL7AP62424 266 aaKnown RBP17.89■□□□□ 0.45
HSPG2-204ENST00000412328 ECT2LQ008S8 904 aa17.89■□□□□ 0.45
HSPG2-204ENST00000412328 RPL6Q02878 288 aaKnown RBP17.89■□□□□ 0.45
HSPG2-204ENST00000412328 ZNF252P-AS1Q0IIN9 211 aa17.89■□□□□ 0.45
HSPG2-204ENST00000412328 ASIC2Q16515 512 aa17.89■□□□□ 0.45
HSPG2-204ENST00000412328 CDO1Q16878 200 aa17.89■□□□□ 0.45
HSPG2-204ENST00000412328 SKOR2Q2VWA4 1001 aaPredicted RBP17.89■□□□□ 0.45
HSPG2-204ENST00000412328 C9orf64Q5T6V5 341 aa17.89■□□□□ 0.45
HSPG2-204ENST00000412328 LYSMD4Q5XG99 296 aa17.89■□□□□ 0.45
HSPG2-204ENST00000412328 ACAD10Q6JQN1 1059 aa17.89■□□□□ 0.45
HSPG2-204ENST00000412328 WDR59Q6PJI9 974 aa17.89■□□□□ 0.45
HSPG2-204ENST00000412328 DNAAF5Q86Y56 855 aa17.89■□□□□ 0.45
HSPG2-204ENST00000412328 CCDC185Q8N715 623 aa17.89■□□□□ 0.45
HSPG2-204ENST00000412328 NETO1Q8TDF5 533 aa17.89■□□□□ 0.45
HSPG2-204ENST00000412328 SIPA1Q96FS4 1042 aa17.89■□□□□ 0.45
HSPG2-204ENST00000412328 FEM1AQ9BSK4 669 aa17.89■□□□□ 0.45
HSPG2-204ENST00000412328 SIK2Q9H0K1 926 aa17.89■□□□□ 0.45
HSPG2-204ENST00000412328 EVLQ9UI08 416 aaPredicted RBP17.89■□□□□ 0.45
HSPG2-204ENST00000412328 SLCO3A1Q9UIG8 710 aa17.89■□□□□ 0.45
HSPG2-204ENST00000412328 PAXBP1Q9Y5B6 917 aa17.89■□□□□ 0.45
HSPG2-204ENST00000412328 SLC30A4O14863 429 aa17.88■□□□□ 0.45
HSPG2-204ENST00000412328 GYPCP04921 128 aa17.88■□□□□ 0.45
HSPG2-204ENST00000412328 GPD1P21695 349 aa17.88■□□□□ 0.45
HSPG2-204ENST00000412328 CD6P30203 668 aa17.88■□□□□ 0.45
HSPG2-204ENST00000412328 ZNF33AQ06730 810 aa17.88■□□□□ 0.45
HSPG2-204ENST00000412328 SCAPQ12770 1279 aa17.88■□□□□ 0.45
HSPG2-204ENST00000412328 ACBD5Q5T8D3 534 aaPredicted RBP17.88■□□□□ 0.45
HSPG2-204ENST00000412328 SND1Q7KZF4 910 aaKnown RBP eCLIP17.88■□□□□ 0.452e-9■■■■■ 44.9
HSPG2-204ENST00000412328 FAM172AQ8WUF8 416 aa17.88■□□□□ 0.45
HSPG2-204ENST00000412328 PRCCQ92733 491 aaPredicted RBP17.88■□□□□ 0.45
HSPG2-204ENST00000412328 PTPRN2Q92932 1015 aa17.88■□□□□ 0.45
HSPG2-204ENST00000412328 NTAN1Q96AB6 310 aa17.88■□□□□ 0.45
HSPG2-204ENST00000412328 TOE1Q96GM8 510 aaKnown RBP17.88■□□□□ 0.45
HSPG2-204ENST00000412328 ZNF419Q96HQ0 510 aaPredicted RBP17.88■□□□□ 0.45
HSPG2-204ENST00000412328 RPL10LQ96L21 214 aaKnown RBP17.88■□□□□ 0.45
HSPG2-204ENST00000412328 HSPA12BQ96MM6 686 aa17.88■□□□□ 0.45
HSPG2-204ENST00000412328 MCEEQ96PE7 176 aa17.88■□□□□ 0.45
HSPG2-204ENST00000412328 MAGEB5Q9BZ81 275 aa17.88■□□□□ 0.45
HSPG2-204ENST00000412328 SEPT11Q9NVA2 429 aaKnown RBP17.88■□□□□ 0.45
HSPG2-204ENST00000412328 MPP6Q9NZW5 540 aa17.88■□□□□ 0.45
HSPG2-204ENST00000412328 PPARGC1AQ9UBK2 798 aaKnown RBP17.88■□□□□ 0.45
HSPG2-204ENST00000412328 SPTBN2O15020 2390 aa17.88■□□□□ 0.45
HSPG2-204ENST00000412328 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.87■□□□□ 0.45
HSPG2-204ENST00000412328 FAM72CH0Y354 149 aa17.87■□□□□ 0.45
HSPG2-204ENST00000412328 ATMINO43313 823 aaPredicted RBP17.87■□□□□ 0.45
HSPG2-204ENST00000412328 CCDC172P0C7W6 258 aa17.87■□□□□ 0.45
HSPG2-204ENST00000412328 VAV1P15498 845 aa17.87■□□□□ 0.45
HSPG2-204ENST00000412328 ADRA1BP35368 520 aa17.87■□□□□ 0.45
HSPG2-204ENST00000412328 HOXD12P35452 270 aa17.87■□□□□ 0.45
HSPG2-204ENST00000412328 ZNF143P52747 638 aaPredicted RBP17.87■□□□□ 0.45
HSPG2-204ENST00000412328 PUM1Q14671 1186 aaKnown RBP eCLIP17.87■□□□□ 0.45
HSPG2-204ENST00000412328 FAM72AQ5TYM5 149 aa17.87■□□□□ 0.45
HSPG2-204ENST00000412328 SFMBT2Q5VUG0 894 aa17.87■□□□□ 0.45
HSPG2-204ENST00000412328 PLEKHA7Q6IQ23 1121 aa17.87■□□□□ 0.45
HSPG2-204ENST00000412328 FAM72DQ6L9T8 149 aa17.87■□□□□ 0.45
HSPG2-204ENST00000412328 DNAJC24Q6P3W2 148 aa17.87■□□□□ 0.45
HSPG2-204ENST00000412328 SETD3Q86TU7 594 aaPredicted RBP17.87■□□□□ 0.45
HSPG2-204ENST00000412328 NLRP14Q86W24 1093 aa17.87■□□□□ 0.45
HSPG2-204ENST00000412328 FAM72BQ86X60 149 aa17.87■□□□□ 0.45
HSPG2-204ENST00000412328 SYT12Q8IV01 421 aa17.87■□□□□ 0.45
HSPG2-204ENST00000412328 DEFB119Q8N690 84 aa17.87■□□□□ 0.45
HSPG2-204ENST00000412328 FAM131CQ96AQ9 280 aa17.87■□□□□ 0.45
HSPG2-204ENST00000412328 VCPIP1Q96JH7 1222 aa17.87■□□□□ 0.45
HSPG2-204ENST00000412328 SELENOOQ9BVL4 669 aa17.87■□□□□ 0.45
HSPG2-204ENST00000412328 SERGEFQ9UGK8 458 aa17.87■□□□□ 0.45
HSPG2-204ENST00000412328 LRRK1Q38SD2 2015 aa17.86■□□□□ 0.45
HSPG2-204ENST00000412328 A0A0D9SEW6 157 aa17.86■□□□□ 0.45
HSPG2-204ENST00000412328 EDDM13A0A1B0GTR0 161 aa17.86■□□□□ 0.45
HSPG2-204ENST00000412328 TM4SF5O14894 197 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms