RNA–Protein interactions for RNA: ENST00000412036.6

CXXC1-202, Transcript of CXXC finger protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXXC1, Length 2,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-202ENST00000412036 ARNTL2Q8WYA1 636 aa18.51■□□□□ 0.55
CXXC1-202ENST00000412036 RPRD1AQ96P16 312 aaPredicted RBP18.51■□□□□ 0.55
CXXC1-202ENST00000412036 RBM15Q96T37 977 aaKnown RBP eCLIP18.51■□□□□ 0.552e-6■■■□□ 15.8
CXXC1-202ENST00000412036 PIH1D1Q9NWS0 290 aaKnown RBP18.51■□□□□ 0.55
CXXC1-202ENST00000412036 NINJ2Q9NZG7 142 aa18.51■□□□□ 0.55
CXXC1-202ENST00000412036 MAFFQ9ULX9 164 aa18.51■□□□□ 0.55
CXXC1-202ENST00000412036 CPQQ9Y646 472 aa18.51■□□□□ 0.55
CXXC1-202ENST00000412036 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.5■□□□□ 0.55
CXXC1-202ENST00000412036 A0A0A0MRY4 1105 aa18.5■□□□□ 0.55
CXXC1-202ENST00000412036 GOLGA6BA6NDN3 693 aa18.5■□□□□ 0.55
CXXC1-202ENST00000412036 WASH4PA8MWX3 477 aa18.5■□□□□ 0.55
CXXC1-202ENST00000412036 RIPK2O43353 540 aa18.5■□□□□ 0.55
CXXC1-202ENST00000412036 ACSL3O95573 720 aa18.5■□□□□ 0.55
CXXC1-202ENST00000412036 PEX11BO96011 259 aa18.5■□□□□ 0.55
CXXC1-202ENST00000412036 PSMB4P28070 264 aa18.5■□□□□ 0.55
CXXC1-202ENST00000412036 PAPOLAP51003 745 aaKnown RBP18.5■□□□□ 0.55
CXXC1-202ENST00000412036 UBE3AQ05086 875 aa18.5■□□□□ 0.55
CXXC1-202ENST00000412036 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.5■□□□□ 0.55
CXXC1-202ENST00000412036 CCHCR1Q8TD31 782 aa18.5■□□□□ 0.55
CXXC1-202ENST00000412036 LRRC45Q96CN5 670 aa18.5■□□□□ 0.55
CXXC1-202ENST00000412036 HMCESQ96FZ2 354 aa18.5■□□□□ 0.55
CXXC1-202ENST00000412036 SPATA13Q96N96 652 aa18.5■□□□□ 0.55
CXXC1-202ENST00000412036 ZYG11BQ9C0D3 744 aa18.5■□□□□ 0.55
CXXC1-202ENST00000412036 PAK5Q9P286 719 aa18.5■□□□□ 0.55
CXXC1-202ENST00000412036 PPARGC1AQ9UBK2 798 aaKnown RBP18.5■□□□□ 0.55
CXXC1-202ENST00000412036 MTRF1LQ9UGC7 380 aaKnown RBP18.5■□□□□ 0.55
CXXC1-202ENST00000412036 CHD5Q8TDI0 1954 aa18.5■□□□□ 0.55
CXXC1-202ENST00000412036 CFAP69A5D8W1 941 aa18.49■□□□□ 0.55
CXXC1-202ENST00000412036 J3KR12 359 aa18.49■□□□□ 0.55
CXXC1-202ENST00000412036 ZBTB24O43167 697 aaPredicted RBP18.49■□□□□ 0.55
CXXC1-202ENST00000412036 TSPAN3O60637 253 aa18.49■□□□□ 0.55
CXXC1-202ENST00000412036 PIAS1O75925 651 aa18.49■□□□□ 0.55
CXXC1-202ENST00000412036 RB1P06400 928 aa18.49■□□□□ 0.55
CXXC1-202ENST00000412036 HDCP19113 662 aa18.49■□□□□ 0.55
CXXC1-202ENST00000412036 ACVRL1P37023 503 aa18.49■□□□□ 0.55
CXXC1-202ENST00000412036 ZNF844Q08AG5 666 aa18.49■□□□□ 0.55
CXXC1-202ENST00000412036 PPM1LQ5SGD2 360 aa18.49■□□□□ 0.55
CXXC1-202ENST00000412036 NUGGCQ68CJ6 796 aa18.49■□□□□ 0.55
CXXC1-202ENST00000412036 LEKR1Q6ZMV7 388 aa18.49■□□□□ 0.55
CXXC1-202ENST00000412036 ITIH5Q86UX2 942 aa18.49■□□□□ 0.55
CXXC1-202ENST00000412036 CAND1Q86VP6 1230 aaKnown RBP18.49■□□□□ 0.55
CXXC1-202ENST00000412036 ZNF707Q96C28 371 aaPredicted RBP18.49■□□□□ 0.55
CXXC1-202ENST00000412036 AGAP3Q96P47 875 aa18.49■□□□□ 0.55
CXXC1-202ENST00000412036 PABPC3Q9H361 631 aaKnown RBP18.49■□□□□ 0.55
CXXC1-202ENST00000412036 ATXN3LQ9H3M9 355 aa18.49■□□□□ 0.55
CXXC1-202ENST00000412036 TMEM248Q9NWD8 314 aa18.49■□□□□ 0.55
CXXC1-202ENST00000412036 SHOC2Q9UQ13 582 aa18.49■□□□□ 0.55
CXXC1-202ENST00000412036 RWDD3Q9Y3V2 267 aa18.49■□□□□ 0.55
CXXC1-202ENST00000412036 ZFP37Q9Y6Q3 630 aaPredicted RBP18.49■□□□□ 0.55
CXXC1-202ENST00000412036 A0A0D9SEW6 157 aa18.49■□□□□ 0.55
CXXC1-202ENST00000412036 PPP1R12AO14974 1030 aaPredicted RBP18.49■□□□□ 0.55
CXXC1-202ENST00000412036 FGF10O15520 208 aaPredicted RBP18.49■□□□□ 0.55
CXXC1-202ENST00000412036 APRTP07741 180 aa18.49■□□□□ 0.55
CXXC1-202ENST00000412036 ZNF135P52742 658 aaPredicted RBP18.49■□□□□ 0.55
CXXC1-202ENST00000412036 SMAD3P84022 425 aaKnown RBP18.49■□□□□ 0.55
CXXC1-202ENST00000412036 IHHQ14623 411 aa18.49■□□□□ 0.55
CXXC1-202ENST00000412036 CCDC149Q6ZUS6 474 aa18.49■□□□□ 0.55
CXXC1-202ENST00000412036 ANKMY2Q8IV38 441 aa18.49■□□□□ 0.55
CXXC1-202ENST00000412036 CATSPERBQ9H7T0 1116 aa18.49■□□□□ 0.55
CXXC1-202ENST00000412036 PRDM16Q9HAZ2 1276 aa18.49■□□□□ 0.55
CXXC1-202ENST00000412036 PLAC1Q9HBJ0 212 aa18.49■□□□□ 0.55
CXXC1-202ENST00000412036 SAYSD1Q9NPB0 183 aa18.49■□□□□ 0.55
CXXC1-202ENST00000412036 RHOQP17081 205 aa18.48■□□□□ 0.55
CXXC1-202ENST00000412036 GYS2P54840 703 aa18.48■□□□□ 0.55
CXXC1-202ENST00000412036 TTMPQ5BVD1 217 aa18.48■□□□□ 0.55
CXXC1-202ENST00000412036 CFAP58Q5T655 872 aa18.48■□□□□ 0.55
CXXC1-202ENST00000412036 SH3GL2Q99962 352 aa18.48■□□□□ 0.55
CXXC1-202ENST00000412036 UXTQ9UBK9 157 aaPredicted RBP18.48■□□□□ 0.55
CXXC1-202ENST00000412036 ASB3Q9Y575 518 aa18.48■□□□□ 0.55
CXXC1-202ENST00000412036 MYOFQ9NZM1 2061 aa18.48■□□□□ 0.55
CXXC1-202ENST00000412036 GJB3O75712 270 aa18.48■□□□□ 0.55
CXXC1-202ENST00000412036 JCHAINP01591 159 aa18.48■□□□□ 0.55
CXXC1-202ENST00000412036 COG7P83436 770 aa18.48■□□□□ 0.55
CXXC1-202ENST00000412036 SPARCL1Q14515 664 aa18.48■□□□□ 0.55
CXXC1-202ENST00000412036 C5orf22Q49AR2 442 aa18.48■□□□□ 0.55
CXXC1-202ENST00000412036 CAPN12Q6ZSI9 719 aa18.48■□□□□ 0.55
CXXC1-202ENST00000412036 OTOP3Q7RTS5 596 aa18.48■□□□□ 0.55
CXXC1-202ENST00000412036 UMODL1-AS1Q8N2C9 162 aa18.48■□□□□ 0.55
CXXC1-202ENST00000412036 ZSWIM3Q96MP5 696 aa18.48■□□□□ 0.55
CXXC1-202ENST00000412036 SERPINB12Q96P63 405 aa18.48■□□□□ 0.55
CXXC1-202ENST00000412036 CDK5RAP1Q96SZ6 601 aaKnown RBP18.48■□□□□ 0.55
CXXC1-202ENST00000412036 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.48■□□□□ 0.55
CXXC1-202ENST00000412036 CLUHO75153 1309 aa18.48■□□□□ 0.55
CXXC1-202ENST00000412036 LPXNO60711 386 aa18.47■□□□□ 0.55
CXXC1-202ENST00000412036 SERPINB6P35237 376 aa18.47■□□□□ 0.55
CXXC1-202ENST00000412036 MAGEA6P43360 314 aa18.47■□□□□ 0.55
CXXC1-202ENST00000412036 HARS2P49590 506 aaKnown RBP18.47■□□□□ 0.55
CXXC1-202ENST00000412036 CAV1Q03135 178 aa18.47■□□□□ 0.55
CXXC1-202ENST00000412036 TEAD2Q15562 447 aa18.47■□□□□ 0.55
CXXC1-202ENST00000412036 Q6ZNB5 142 aa18.47■□□□□ 0.55
CXXC1-202ENST00000412036 MPP5Q8N3R9 675 aa18.47■□□□□ 0.55
CXXC1-202ENST00000412036 PDCD7Q8N8D1 485 aaKnown RBP18.47■□□□□ 0.55
CXXC1-202ENST00000412036 BHMTQ93088 406 aa18.47■□□□□ 0.55
CXXC1-202ENST00000412036 PLD4Q96BZ4 506 aa18.47■□□□□ 0.55
CXXC1-202ENST00000412036 GFRA2O00451 464 aa18.47■□□□□ 0.55
CXXC1-202ENST00000412036 RHOP08100 348 aa18.47■□□□□ 0.55
CXXC1-202ENST00000412036 GLDCP23378 1020 aa18.47■□□□□ 0.55
CXXC1-202ENST00000412036 MAGEA4P43358 317 aa18.47■□□□□ 0.55
CXXC1-202ENST00000412036 GPX6P59796 221 aa18.47■□□□□ 0.55
CXXC1-202ENST00000412036 GABPB1Q06547 395 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms