RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 PTPRBP23467 1997 aa17.26■□□□□ 0.35
MRPL55-220ENST00000411464 TRIM49BA6NDI0 452 aa17.26■□□□□ 0.35
MRPL55-220ENST00000411464 PMM2O15305 246 aa17.26■□□□□ 0.35
MRPL55-220ENST00000411464 CALCAP01258 141 aa17.26■□□□□ 0.35
MRPL55-220ENST00000411464 MZF1P28698 734 aaPredicted RBP17.26■□□□□ 0.35
MRPL55-220ENST00000411464 EIF2S3P41091 472 aaKnown RBP17.26■□□□□ 0.35
MRPL55-220ENST00000411464 ACADSBP45954 432 aa17.26■□□□□ 0.35
MRPL55-220ENST00000411464 RXRGP48443 463 aa17.26■□□□□ 0.35
MRPL55-220ENST00000411464 ACADVLP49748 655 aa17.26■□□□□ 0.35
MRPL55-220ENST00000411464 CLDN6P56747 220 aa17.26■□□□□ 0.35
MRPL55-220ENST00000411464 BNIP3Q12983 259 aa17.26■□□□□ 0.35
MRPL55-220ENST00000411464 SLC12A1Q13621 1099 aa17.26■□□□□ 0.35
MRPL55-220ENST00000411464 ELAVL3Q14576 367 aaKnown RBP17.26■□□□□ 0.35
MRPL55-220ENST00000411464 CCDC40Q4G0X9 1142 aa17.26■□□□□ 0.35
MRPL55-220ENST00000411464 ZC3H12AQ5D1E8 599 aaKnown RBP17.26■□□□□ 0.35
MRPL55-220ENST00000411464 HES3Q5TGS1 186 aa17.26■□□□□ 0.35
MRPL55-220ENST00000411464 SYPL2Q5VXT5 272 aa17.26■□□□□ 0.35
MRPL55-220ENST00000411464 RAP1GAP2Q684P5 730 aa17.26■□□□□ 0.35
MRPL55-220ENST00000411464 RRAGAQ7L523 313 aa17.26■□□□□ 0.35
MRPL55-220ENST00000411464 TAC4Q86UU9 113 aa17.26■□□□□ 0.35
MRPL55-220ENST00000411464 CHSY1Q86X52 802 aa17.26■□□□□ 0.35
MRPL55-220ENST00000411464 MFSD2AQ8NA29 543 aa17.26■□□□□ 0.35
MRPL55-220ENST00000411464 TSC1Q92574 1164 aa17.26■□□□□ 0.35
MRPL55-220ENST00000411464 KAT5Q92993 513 aa17.26■□□□□ 0.35
MRPL55-220ENST00000411464 BTN2A3PQ96KV6 586 aa17.26■□□□□ 0.35
MRPL55-220ENST00000411464 NRSN2Q9GZP1 204 aa17.26■□□□□ 0.35
MRPL55-220ENST00000411464 SLC12A6Q9UHW9 1150 aa17.26■□□□□ 0.35
MRPL55-220ENST00000411464 XPO7Q9UIA9 1087 aaKnown RBP17.26■□□□□ 0.35
MRPL55-220ENST00000411464 C10orf142B7Z368 130 aa17.25■□□□□ 0.35
MRPL55-220ENST00000411464 F5H5T6 163 aa17.25■□□□□ 0.35
MRPL55-220ENST00000411464 PSMA7O14818 248 aa17.25■□□□□ 0.35
MRPL55-220ENST00000411464 LATO43561 262 aa17.25■□□□□ 0.35
MRPL55-220ENST00000411464 MAGEC1O60732 1142 aa17.25■□□□□ 0.35
MRPL55-220ENST00000411464 TACR2P21452 398 aa17.25■□□□□ 0.35
MRPL55-220ENST00000411464 ITPKBP27987 946 aa17.25■□□□□ 0.35
MRPL55-220ENST00000411464 GPD2P43304 727 aa17.25■□□□□ 0.35
MRPL55-220ENST00000411464 SULT2A1Q06520 285 aa17.25■□□□□ 0.35
MRPL55-220ENST00000411464 ILKQ13418 452 aa17.25■□□□□ 0.35
MRPL55-220ENST00000411464 STIM1Q13586 685 aa17.25■□□□□ 0.35
MRPL55-220ENST00000411464 NAPEPLDQ6IQ20 393 aa17.25■□□□□ 0.35
MRPL55-220ENST00000411464 BEND5Q7L4P6 421 aa17.25■□□□□ 0.35
MRPL55-220ENST00000411464 DSG4Q86SJ6 1040 aa17.25■□□□□ 0.35
MRPL55-220ENST00000411464 SMARCE1Q969G3 411 aa17.25■□□□□ 0.35
MRPL55-220ENST00000411464 CEP63Q96MT8 703 aa17.25■□□□□ 0.35
MRPL55-220ENST00000411464 SPAG5Q96R06 1193 aa17.25■□□□□ 0.35
MRPL55-220ENST00000411464 KDM4CQ9H3R0 1056 aa17.25■□□□□ 0.35
MRPL55-220ENST00000411464 GDPD2Q9HCC8 539 aa17.25■□□□□ 0.35
MRPL55-220ENST00000411464 MUC22E2RYF6 1773 aaPredicted RBP17.25■□□□□ 0.35
MRPL55-220ENST00000411464 GOLGA4Q13439 2230 aaKnown RBP17.24■□□□□ 0.35
MRPL55-220ENST00000411464 CKMT2P17540 419 aa17.24■□□□□ 0.35
MRPL55-220ENST00000411464 NUDT1P36639 197 aa17.24■□□□□ 0.35
MRPL55-220ENST00000411464 RPL34P49207 117 aaKnown RBP17.24■□□□□ 0.35
MRPL55-220ENST00000411464 STK19P49842 368 aaPredicted RBP17.24■□□□□ 0.35
MRPL55-220ENST00000411464 PPP2CBP62714 309 aa17.24■□□□□ 0.35
MRPL55-220ENST00000411464 PPP2CAP67775 309 aa17.24■□□□□ 0.35
MRPL55-220ENST00000411464 GCNT1Q02742 428 aa17.24■□□□□ 0.35
MRPL55-220ENST00000411464 C19orf57Q0VDD7 668 aa17.24■□□□□ 0.35
MRPL55-220ENST00000411464 OVGP1Q12889 678 aa17.24■□□□□ 0.35
MRPL55-220ENST00000411464 FAM46CQ5VWP2 391 aa17.24■□□□□ 0.35
MRPL55-220ENST00000411464 FBXL19Q6PCT2 694 aa17.24■□□□□ 0.35
MRPL55-220ENST00000411464 FMR1NBQ8N0W7 255 aaPredicted RBP17.24■□□□□ 0.35
MRPL55-220ENST00000411464 ATP6V0D2Q8N8Y2 350 aa17.24■□□□□ 0.35
MRPL55-220ENST00000411464 STK32AQ8WU08 396 aa17.24■□□□□ 0.35
MRPL55-220ENST00000411464 BAP1Q92560 729 aa17.24■□□□□ 0.35
MRPL55-220ENST00000411464 MED15Q96RN5 788 aa17.24■□□□□ 0.35
MRPL55-220ENST00000411464 PPP1R9BQ96SB3 815 aa17.24■□□□□ 0.35
MRPL55-220ENST00000411464 POPDC2Q9HBU9 364 aa17.24■□□□□ 0.35
MRPL55-220ENST00000411464 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.24■□□□□ 0.35
MRPL55-220ENST00000411464 HOOK1Q9UJC3 728 aaKnown RBP17.24■□□□□ 0.35
MRPL55-220ENST00000411464 DMTF1Q9Y222 760 aa17.24■□□□□ 0.35
MRPL55-220ENST00000411464 GOLGA6L4A6NEF3 574 aa17.23■□□□□ 0.35
MRPL55-220ENST00000411464 TK2O00142 265 aa17.23■□□□□ 0.35
MRPL55-220ENST00000411464 P4HA2O15460 535 aa17.23■□□□□ 0.35
MRPL55-220ENST00000411464 SLC7A4O43246 635 aa17.23■□□□□ 0.35
MRPL55-220ENST00000411464 RTN2O75298 545 aa17.23■□□□□ 0.35
MRPL55-220ENST00000411464 TRUB2O95900 331 aaKnown RBP17.23■□□□□ 0.35
MRPL55-220ENST00000411464 KRT5P13647 590 aa17.23■□□□□ 0.35
MRPL55-220ENST00000411464 VAV1P15498 845 aa17.23■□□□□ 0.35
MRPL55-220ENST00000411464 PDGFRAP16234 1089 aa17.23■□□□□ 0.35
MRPL55-220ENST00000411464 MAT2AP31153 395 aaKnown RBP17.23■□□□□ 0.35
MRPL55-220ENST00000411464 DRD3P35462 400 aa17.23■□□□□ 0.35
MRPL55-220ENST00000411464 NUMBP49757 651 aa17.23■□□□□ 0.35
MRPL55-220ENST00000411464 OXCT1P55809 520 aa17.23■□□□□ 0.35
MRPL55-220ENST00000411464 YWHAZP63104 245 aaKnown RBP17.23■□□□□ 0.35
MRPL55-220ENST00000411464 STAT4Q14765 748 aa17.23■□□□□ 0.35
MRPL55-220ENST00000411464 RTP5Q14D33 572 aa17.23■□□□□ 0.35
MRPL55-220ENST00000411464 ACCSLQ4AC99 568 aa17.23■□□□□ 0.35
MRPL55-220ENST00000411464 RABGAP1LQ5R372 815 aa17.23■□□□□ 0.35
MRPL55-220ENST00000411464 SFMBT2Q5VUG0 894 aa17.23■□□□□ 0.35
MRPL55-220ENST00000411464 IQCHQ86VS3 1027 aa17.23■□□□□ 0.35
MRPL55-220ENST00000411464 SPATS2Q86XZ4 545 aaKnown RBP17.23■□□□□ 0.35
MRPL55-220ENST00000411464 CCAR2Q8N163 923 aaKnown RBP17.23■□□□□ 0.35
MRPL55-220ENST00000411464 EHBP1Q8NDI1 1231 aa17.23■□□□□ 0.35
MRPL55-220ENST00000411464 LMO3Q8TAP4 145 aa17.23■□□□□ 0.35
MRPL55-220ENST00000411464 OR8D1Q8WZ84 308 aa17.23■□□□□ 0.35
MRPL55-220ENST00000411464 DHTKD1Q96HY7 919 aaPredicted RBP17.23■□□□□ 0.35
MRPL55-220ENST00000411464 ARHGAP20Q9P2F6 1191 aa17.23■□□□□ 0.35
MRPL55-220ENST00000411464 CYTH4Q9UIA0 394 aa17.23■□□□□ 0.35
MRPL55-220ENST00000411464 KCNU1A8MYU2 1149 aa17.22■□□□□ 0.35
MRPL55-220ENST00000411464 MED7O43513 233 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms