RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 CCDC91Q7Z6B0 441 aa13.9□□□□□ -0.18
LIMS1-205ENST00000410093 PRPF39Q86UA1 669 aaKnown RBP13.9□□□□□ -0.18
LIMS1-205ENST00000410093 NUP93Q8N1F7 819 aa13.9□□□□□ -0.18
LIMS1-205ENST00000410093 C2orf15Q8WU43 125 aaKnown RBP13.9□□□□□ -0.18
LIMS1-205ENST00000410093 TBC1D31Q96DN5 1066 aa13.9□□□□□ -0.18
LIMS1-205ENST00000410093 TEKT5Q96M29 485 aa13.9□□□□□ -0.18
LIMS1-205ENST00000410093 MAGEB5Q9BZ81 275 aa13.9□□□□□ -0.18
LIMS1-205ENST00000410093 IL22Q9GZX6 179 aa13.9□□□□□ -0.18
LIMS1-205ENST00000410093 CASS4Q9NQ75 786 aa13.9□□□□□ -0.18
LIMS1-205ENST00000410093 OLA1Q9NTK5 396 aaKnown RBP13.9□□□□□ -0.18
LIMS1-205ENST00000410093 SEPT10Q9P0V9 454 aa13.9□□□□□ -0.18
LIMS1-205ENST00000410093 TXNDC16Q9P2K2 825 aa13.9□□□□□ -0.18
LIMS1-205ENST00000410093 CACNG4Q9UBN1 327 aa13.9□□□□□ -0.18
LIMS1-205ENST00000410093 TRIOBPQ9H2D6 2365 aa13.9□□□□□ -0.18
LIMS1-205ENST00000410093 MYO16Q9Y6X6 1858 aa13.9□□□□□ -0.18
LIMS1-205ENST00000410093 DNAH12Q6ZR08 3092 aa13.9□□□□□ -0.18
LIMS1-205ENST00000410093 FAM237BA0A1B0GVD1 139 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 WASH4PA8MWX3 477 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 FAM72CH0Y354 149 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 ARVCFO00192 962 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 ANXA9O76027 345 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 USP1O94782 785 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 RTN3O95197 1032 aaPredicted RBP13.9□□□□□ -0.19
LIMS1-205ENST00000410093 PARNO95453 639 aaKnown RBP13.9□□□□□ -0.19
LIMS1-205ENST00000410093 RAG1P15918 1043 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 SELPP16109 830 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 ADRA1DP25100 572 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 ILF2Q12905 390 aaKnown RBP13.9□□□□□ -0.19
LIMS1-205ENST00000410093 CRYMQ14894 314 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 GRTP1Q5TC63 336 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 FAM72AQ5TYM5 149 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 KCTD11Q693B1 232 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 FAM72DQ6L9T8 149 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 LRRTM3Q86VH5 581 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 FAM72BQ86X60 149 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 ZNF276Q8N554 614 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 PTCD2Q8WV60 388 aaKnown RBP13.9□□□□□ -0.19
LIMS1-205ENST00000410093 EDEM1Q92611 657 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 OXNAD1Q96HP4 312 aaPredicted RBP13.9□□□□□ -0.19
LIMS1-205ENST00000410093 SERAC1Q96JX3 654 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 TOX2Q96NM4 488 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 LRRC37BQ96QE4 947 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 SRPK1Q96SB4 655 aaKnown RBP13.9□□□□□ -0.19
LIMS1-205ENST00000410093 CPNE1Q99829 537 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 SIKE1Q9BRV8 207 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 TRIM55Q9BYV6 548 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 RETREG1Q9H6L5 497 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 PLAC1Q9HBJ0 212 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 TBC1D13Q9NVG8 400 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 TMLHEQ9NVH6 421 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 IL37Q9NZH6 218 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 DCDC2Q9UHG0 476 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 GRID1Q9ULK0 1009 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 TLR6Q9Y2C9 796 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 MFHAS1Q9Y4C4 1052 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 PCDHB5Q9Y5E4 795 aa13.9□□□□□ -0.19
LIMS1-205ENST00000410093 FNDC1Q4ZHG4 1894 aaPredicted RBP13.89□□□□□ -0.19
LIMS1-205ENST00000410093 WDR27A2RRH5 827 aa13.89□□□□□ -0.19
LIMS1-205ENST00000410093 I3L4J1 428 aa13.89□□□□□ -0.19
LIMS1-205ENST00000410093 TADA2AO75478 443 aa13.89□□□□□ -0.19
LIMS1-205ENST00000410093 RFPL1O75677 317 aa13.89□□□□□ -0.19
LIMS1-205ENST00000410093 RASSF9O75901 435 aa13.89□□□□□ -0.19
LIMS1-205ENST00000410093 ANO4Q32M45 955 aa13.89□□□□□ -0.19
LIMS1-205ENST00000410093 MANEALQ5VSG8 457 aa13.89□□□□□ -0.19
LIMS1-205ENST00000410093 CGB2Q6NT52 195 aa13.89□□□□□ -0.19
LIMS1-205ENST00000410093 ANKRD33Q7Z3H0 272 aa13.89□□□□□ -0.19
LIMS1-205ENST00000410093 TMEM135Q86UB9 458 aa13.89□□□□□ -0.19
LIMS1-205ENST00000410093 LCA5Q86VQ0 697 aa13.89□□□□□ -0.19
LIMS1-205ENST00000410093 ABI1Q8IZP0 508 aa13.89□□□□□ -0.19
LIMS1-205ENST00000410093 ADAM32Q8TC27 787 aa13.89□□□□□ -0.19
LIMS1-205ENST00000410093 ARNTL2Q8WYA1 636 aa13.89□□□□□ -0.19
LIMS1-205ENST00000410093 TSSK1BQ9BXA7 367 aa13.89□□□□□ -0.19
LIMS1-205ENST00000410093 MRPL9Q9BYD2 267 aaKnown RBP13.89□□□□□ -0.19
LIMS1-205ENST00000410093 CLIC5Q9NZA1 410 aa13.89□□□□□ -0.19
LIMS1-205ENST00000410093 VANGL2Q9ULK5 521 aa13.89□□□□□ -0.19
LIMS1-205ENST00000410093 MTO1Q9Y2Z2 717 aaKnown RBP13.89□□□□□ -0.19
LIMS1-205ENST00000410093 FAM92AA1XBS5 289 aa13.88□□□□□ -0.19
LIMS1-205ENST00000410093 ARHGAP42A6NI28 874 aa13.88□□□□□ -0.19
LIMS1-205ENST00000410093 CXorf49A8MYA2 514 aaPredicted RBP13.88□□□□□ -0.19
LIMS1-205ENST00000410093 H7C4K7 107 aa13.88□□□□□ -0.19
LIMS1-205ENST00000410093 GLRA3O75311 464 aa13.88□□□□□ -0.19
LIMS1-205ENST00000410093 NEFHP12036 1026 aa13.88□□□□□ -0.19
LIMS1-205ENST00000410093 CCNB1P14635 433 aa13.88□□□□□ -0.19
LIMS1-205ENST00000410093 DNAJB1P25685 340 aa13.88□□□□□ -0.19
LIMS1-205ENST00000410093 MGAT1P26572 445 aa13.88□□□□□ -0.19
LIMS1-205ENST00000410093 GP5P40197 560 aa13.88□□□□□ -0.19
LIMS1-205ENST00000410093 SERPINB4P48594 390 aa13.88□□□□□ -0.19
LIMS1-205ENST00000410093 POLD2P49005 469 aa13.88□□□□□ -0.19
LIMS1-205ENST00000410093 KPNA1P52294 538 aaPredicted RBP13.88□□□□□ -0.19
LIMS1-205ENST00000410093 CDH17Q12864 832 aa13.88□□□□□ -0.19
LIMS1-205ENST00000410093 PAN2Q504Q3 1202 aaKnown RBP13.88□□□□□ -0.19
LIMS1-205ENST00000410093 CLLU1OSQ5K130 101 aa13.88□□□□□ -0.19
LIMS1-205ENST00000410093 SYCP2LQ5T4T6 812 aa13.88□□□□□ -0.19
LIMS1-205ENST00000410093 ZNF280DQ6N043 979 aa13.88□□□□□ -0.19
LIMS1-205ENST00000410093 FAM47EQ6ZV65 393 aa13.88□□□□□ -0.19
LIMS1-205ENST00000410093 LRRC8DQ7L1W4 858 aa13.88□□□□□ -0.19
LIMS1-205ENST00000410093 RTN4RL1Q86UN2 441 aaPredicted RBP13.88□□□□□ -0.19
LIMS1-205ENST00000410093 BADQ92934 168 aa13.88□□□□□ -0.19
LIMS1-205ENST00000410093 CERS2Q96G23 380 aa13.88□□□□□ -0.19
LIMS1-205ENST00000410093 C7orf26Q96N11 449 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms