RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 USP46P62068 366 aa17.36■□□□□ 0.37
GCFC2-202ENST00000409857 SKIV2LQ15477 1246 aaKnown RBP17.36■□□□□ 0.37
GCFC2-202ENST00000409857 PARP6Q2NL67 630 aa17.36■□□□□ 0.37
GCFC2-202ENST00000409857 OTOAQ7RTW8 1153 aa17.36■□□□□ 0.37
GCFC2-202ENST00000409857 PHF13Q86YI8 300 aaPredicted RBP17.36■□□□□ 0.37
GCFC2-202ENST00000409857 PDZD8Q8NEN9 1154 aa17.36■□□□□ 0.37
GCFC2-202ENST00000409857 SCAMP5Q8TAC9 235 aa17.36■□□□□ 0.37
GCFC2-202ENST00000409857 TTC8Q8TAM2 541 aa17.36■□□□□ 0.37
GCFC2-202ENST00000409857 RIPOR3Q96MK2 946 aa17.36■□□□□ 0.37
GCFC2-202ENST00000409857 TMEM121Q9BTD3 319 aa17.36■□□□□ 0.37
GCFC2-202ENST00000409857 RNPEPL1Q9HAU8 725 aa17.36■□□□□ 0.37
GCFC2-202ENST00000409857 GABBR2O75899 941 aa17.35■□□□□ 0.37
GCFC2-202ENST00000409857 SMNDC1O75940 238 aaKnown RBP eCLIP17.35■□□□□ 0.37
GCFC2-202ENST00000409857 WFS1O76024 890 aa17.35■□□□□ 0.37
GCFC2-202ENST00000409857 IFNB1P01574 187 aa17.35■□□□□ 0.37
GCFC2-202ENST00000409857 MTHFRP42898 656 aa17.35■□□□□ 0.37
GCFC2-202ENST00000409857 ZNF252P-AS1Q0IIN9 211 aa17.35■□□□□ 0.37
GCFC2-202ENST00000409857 PDIA2Q13087 525 aaKnown RBP17.35■□□□□ 0.37
GCFC2-202ENST00000409857 PABPC1LQ4VXU2 614 aaKnown RBP17.35■□□□□ 0.37
GCFC2-202ENST00000409857 TAF1BQ53T94 588 aaPredicted RBP17.35■□□□□ 0.37
GCFC2-202ENST00000409857 ATAT1Q5SQI0 421 aa17.35■□□□□ 0.37
GCFC2-202ENST00000409857 LVRNQ6Q4G3 990 aa17.35■□□□□ 0.37
GCFC2-202ENST00000409857 ALLCQ8N6M5 410 aa17.35■□□□□ 0.37
GCFC2-202ENST00000409857 FEZF2Q8TBJ5 459 aa17.35■□□□□ 0.37
GCFC2-202ENST00000409857 IRGQQ8WZA9 623 aa17.35■□□□□ 0.37
GCFC2-202ENST00000409857 NECTIN4Q96NY8 510 aa17.35■□□□□ 0.37
GCFC2-202ENST00000409857 CPXM1Q96SM3 734 aa17.35■□□□□ 0.37
GCFC2-202ENST00000409857 CORO1BQ9BR76 489 aa17.35■□□□□ 0.37
GCFC2-202ENST00000409857 MRPL47Q9HD33 250 aaKnown RBP17.35■□□□□ 0.37
GCFC2-202ENST00000409857 NPHS2Q9NP85 383 aa17.35■□□□□ 0.37
GCFC2-202ENST00000409857 SAE1Q9UBE0 346 aaPredicted RBP17.35■□□□□ 0.37
GCFC2-202ENST00000409857 TYROBPO43914 113 aa17.35■□□□□ 0.37
GCFC2-202ENST00000409857 RHOP08100 348 aa17.35■□□□□ 0.37
GCFC2-202ENST00000409857 KRT4P19013 534 aa17.35■□□□□ 0.37
GCFC2-202ENST00000409857 RGS7P49802 495 aa17.35■□□□□ 0.37
GCFC2-202ENST00000409857 CCNHP51946 323 aaPredicted RBP17.35■□□□□ 0.37
GCFC2-202ENST00000409857 CCNG1P51959 295 aa17.35■□□□□ 0.37
GCFC2-202ENST00000409857 ADIGQ0VDE8 80 aa17.35■□□□□ 0.37
GCFC2-202ENST00000409857 CYP4A22Q5TCH4 519 aa17.35■□□□□ 0.37
GCFC2-202ENST00000409857 HHATQ5VTY9 493 aa17.35■□□□□ 0.37
GCFC2-202ENST00000409857 TDRPQ86YL5 185 aa17.35■□□□□ 0.37
GCFC2-202ENST00000409857 ZDHHC17Q8IUH5 632 aa17.35■□□□□ 0.37
GCFC2-202ENST00000409857 SIX6OS1Q8N1H7 587 aa17.35■□□□□ 0.37
GCFC2-202ENST00000409857 AGGF1Q8N302 714 aaeCLIP17.35■□□□□ 0.371e-8■■□□□ 11.6
GCFC2-202ENST00000409857 SUSD6Q92537 303 aa17.35■□□□□ 0.37
GCFC2-202ENST00000409857 NAF1Q96HR8 494 aaKnown RBP17.35■□□□□ 0.37
GCFC2-202ENST00000409857 IL21Q9HBE4 155 aa17.35■□□□□ 0.37
GCFC2-202ENST00000409857 ZNF334Q9HCZ1 680 aaPredicted RBP17.35■□□□□ 0.37
GCFC2-202ENST00000409857 WDR6Q9NNW5 1121 aaKnown RBP17.35■□□□□ 0.37
GCFC2-202ENST00000409857 HCFC1R1Q9NWW0 138 aa17.35■□□□□ 0.37
GCFC2-202ENST00000409857 SOBPA7XYQ1 873 aa17.34■□□□□ 0.37
GCFC2-202ENST00000409857 ZNF197O14709 1029 aa17.34■□□□□ 0.37
GCFC2-202ENST00000409857 ENTPD5O75356 428 aa17.34■□□□□ 0.37
GCFC2-202ENST00000409857 MMP8P22894 467 aa17.34■□□□□ 0.37
GCFC2-202ENST00000409857 GPX6P59796 221 aa17.34■□□□□ 0.37
GCFC2-202ENST00000409857 OVGP1Q12889 678 aa17.34■□□□□ 0.37
GCFC2-202ENST00000409857 NR1H3Q13133 447 aa17.34■□□□□ 0.37
GCFC2-202ENST00000409857 SMAD4Q13485 552 aaKnown RBP17.34■□□□□ 0.37
GCFC2-202ENST00000409857 LEXMQ3ZCV2 418 aa17.34■□□□□ 0.37
GCFC2-202ENST00000409857 PTPN20Q4JDL3 420 aa17.34■□□□□ 0.37
GCFC2-202ENST00000409857 PRSS36Q5K4E3 855 aa17.34■□□□□ 0.37
GCFC2-202ENST00000409857 SNX30Q5VWJ9 437 aa17.34■□□□□ 0.37
GCFC2-202ENST00000409857 PDZD4Q76G19 769 aaPredicted RBP17.34■□□□□ 0.37
GCFC2-202ENST00000409857 GRASPQ7Z6J2 395 aaPredicted RBP17.34■□□□□ 0.37
GCFC2-202ENST00000409857 STKLD1Q8NE28 680 aa17.34■□□□□ 0.37
GCFC2-202ENST00000409857 ZNF75CPQ92670 426 aaPredicted RBP17.34■□□□□ 0.37
GCFC2-202ENST00000409857 MAGED2Q9UNF1 606 aaPredicted RBP17.34■□□□□ 0.37
GCFC2-202ENST00000409857 GOLGA8RI6L899 631 aa17.34■□□□□ 0.37
GCFC2-202ENST00000409857 DCTN3O75935 186 aa17.34■□□□□ 0.37
GCFC2-202ENST00000409857 ZBED1O96006 694 aa17.34■□□□□ 0.37
GCFC2-202ENST00000409857 F11P03951 625 aa17.34■□□□□ 0.37
GCFC2-202ENST00000409857 TPBGLP0DKB5 382 aa17.34■□□□□ 0.37
GCFC2-202ENST00000409857 KCNA5P22460 613 aa17.34■□□□□ 0.37
GCFC2-202ENST00000409857 CALB2P22676 271 aa17.34■□□□□ 0.37
GCFC2-202ENST00000409857 OGDHQ02218 1023 aa17.34■□□□□ 0.37
GCFC2-202ENST00000409857 RNASEH2BQ5TBB1 312 aaKnown RBP17.34■□□□□ 0.37
GCFC2-202ENST00000409857 RGS9BPQ6ZS82 235 aa17.34■□□□□ 0.37
GCFC2-202ENST00000409857 MTDHQ86UE4 582 aaKnown RBP17.34■□□□□ 0.37
GCFC2-202ENST00000409857 HS6ST3Q8IZP7 471 aa17.34■□□□□ 0.37
GCFC2-202ENST00000409857 FBXO32Q969P5 355 aa17.34■□□□□ 0.37
GCFC2-202ENST00000409857 VCPIP1Q96JH7 1222 aa17.34■□□□□ 0.37
GCFC2-202ENST00000409857 NUDCD1Q96RS6 583 aa17.34■□□□□ 0.37
GCFC2-202ENST00000409857 KLF6Q99612 283 aaPredicted RBP17.34■□□□□ 0.37
GCFC2-202ENST00000409857 DCTN4Q9UJW0 460 aa17.34■□□□□ 0.37
GCFC2-202ENST00000409857 SMG5Q9UPR3 1016 aaKnown RBP17.34■□□□□ 0.37
GCFC2-202ENST00000409857 E5RJQ4 531 aa17.33■□□□□ 0.36
GCFC2-202ENST00000409857 ATP5HO75947 161 aa17.33■□□□□ 0.36
GCFC2-202ENST00000409857 ZDHHC11BP0C7U3 371 aa17.33■□□□□ 0.36
GCFC2-202ENST00000409857 ADRA1DP25100 572 aa17.33■□□□□ 0.36
GCFC2-202ENST00000409857 SSTR1P30872 391 aa17.33■□□□□ 0.36
GCFC2-202ENST00000409857 TAF10Q12962 218 aa17.33■□□□□ 0.36
GCFC2-202ENST00000409857 PUS10Q3MIT2 529 aaKnown RBP17.33■□□□□ 0.36
GCFC2-202ENST00000409857 ARHGAP18Q8N392 663 aa17.33■□□□□ 0.36
GCFC2-202ENST00000409857 TTC25Q96NG3 672 aa17.33■□□□□ 0.36
GCFC2-202ENST00000409857 ZMYM5Q9UJ78 669 aa17.33■□□□□ 0.36
GCFC2-202ENST00000409857 CLUHO75153 1309 aa17.33■□□□□ 0.36
GCFC2-202ENST00000409857 SGK1O00141 431 aa17.32■□□□□ 0.36
GCFC2-202ENST00000409857 ALOX15BO15296 676 aa17.32■□□□□ 0.36
GCFC2-202ENST00000409857 LCP1P13796 627 aa17.32■□□□□ 0.36
GCFC2-202ENST00000409857 ALDH3A1P30838 453 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms