RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 COG7P83436 770 aa20.59■□□□□ 0.89
USP39-204ENST00000409766 DDR2Q16832 855 aa20.59■□□□□ 0.89
USP39-204ENST00000409766 SDHAF4Q5VUM1 108 aa20.59■□□□□ 0.89
USP39-204ENST00000409766 PACS1Q6VY07 963 aa20.59■□□□□ 0.89
USP39-204ENST00000409766 MON1AQ86VX9 555 aa20.59■□□□□ 0.89
USP39-204ENST00000409766 SLC13A1Q9BZW2 595 aa20.59■□□□□ 0.89
USP39-204ENST00000409766 ELAC1Q9H777 363 aaKnown RBP20.59■□□□□ 0.89
USP39-204ENST00000409766 VANGL2Q9ULK5 521 aa20.59■□□□□ 0.89
USP39-204ENST00000409766 RPS6KL1Q9Y6S9 549 aa20.59■□□□□ 0.89
USP39-204ENST00000409766 ENPP3O14638 875 aa20.58■□□□□ 0.89
USP39-204ENST00000409766 CCNCP24863 283 aa20.58■□□□□ 0.89
USP39-204ENST00000409766 GRK4P32298 578 aa20.58■□□□□ 0.89
USP39-204ENST00000409766 MRPL58Q14197 206 aaKnown RBP20.58■□□□□ 0.89
USP39-204ENST00000409766 SPANXN3Q5MJ09 141 aa20.58■□□□□ 0.89
USP39-204ENST00000409766 ZNF449Q6P9G9 518 aa20.58■□□□□ 0.89
USP39-204ENST00000409766 CNTD1Q8N815 330 aa20.58■□□□□ 0.89
USP39-204ENST00000409766 SLAIN1Q8ND83 568 aa20.58■□□□□ 0.89
USP39-204ENST00000409766 FCRL3Q96P31 734 aaPredicted RBP20.58■□□□□ 0.89
USP39-204ENST00000409766 LRRC40Q9H9A6 602 aa20.58■□□□□ 0.89
USP39-204ENST00000409766 BFARQ9NZS9 450 aa20.58■□□□□ 0.89
USP39-204ENST00000409766 ADAM28Q9UKQ2 775 aa20.58■□□□□ 0.89
USP39-204ENST00000409766 CACNG3O60359 315 aa20.58■□□□□ 0.88
USP39-204ENST00000409766 CRHR1P34998 444 aa20.58■□□□□ 0.88
USP39-204ENST00000409766 MAGEA11P43364 429 aa20.58■□□□□ 0.88
USP39-204ENST00000409766 CDK7P50613 346 aa20.58■□□□□ 0.88
USP39-204ENST00000409766 CES3Q6UWW8 571 aa20.58■□□□□ 0.88
USP39-204ENST00000409766 ARHGAP36Q6ZRI8 547 aa20.58■□□□□ 0.88
USP39-204ENST00000409766 TMEM135Q86UB9 458 aa20.58■□□□□ 0.88
USP39-204ENST00000409766 NDUFAF2Q8N183 169 aa20.58■□□□□ 0.88
USP39-204ENST00000409766 LZTR1Q8N653 840 aa20.58■□□□□ 0.88
USP39-204ENST00000409766 DBF4BQ8NFT6 615 aa20.58■□□□□ 0.88
USP39-204ENST00000409766 TBC1D31Q96DN5 1066 aa20.58■□□□□ 0.88
USP39-204ENST00000409766 SERPINB11Q96P15 392 aa20.58■□□□□ 0.88
USP39-204ENST00000409766 FBXO44Q9H4M3 255 aa20.58■□□□□ 0.88
USP39-204ENST00000409766 CATSPERBQ9H7T0 1116 aa20.58■□□□□ 0.88
USP39-204ENST00000409766 PCMTD2Q9NV79 361 aa20.58■□□□□ 0.88
USP39-204ENST00000409766 PCDHB5Q9Y5E4 795 aa20.58■□□□□ 0.88
USP39-204ENST00000409766 PSAT1Q9Y617 370 aa20.58■□□□□ 0.88
USP39-204ENST00000409766 DFFAO00273 331 aa20.57■□□□□ 0.88
USP39-204ENST00000409766 KLF11O14901 512 aa20.57■□□□□ 0.88
USP39-204ENST00000409766 BGNP21810 368 aa20.57■□□□□ 0.88
USP39-204ENST00000409766 NCALDP61601 193 aa20.57■□□□□ 0.88
USP39-204ENST00000409766 CTXN3Q4LDR2 81 aa20.57■□□□□ 0.88
USP39-204ENST00000409766 PLEKHG4Q58EX7 1191 aa20.57■□□□□ 0.88
USP39-204ENST00000409766 FYB2Q5VWT5 728 aa20.57■□□□□ 0.88
USP39-204ENST00000409766 MSANTD2Q6P1R3 559 aa20.57■□□□□ 0.88
USP39-204ENST00000409766 KLHDC8BQ8IXV7 354 aa20.57■□□□□ 0.88
USP39-204ENST00000409766 ABI1Q8IZP0 508 aa20.57■□□□□ 0.88
USP39-204ENST00000409766 DNAAF3Q8N9W5 541 aa20.57■□□□□ 0.88
USP39-204ENST00000409766 CERS2Q96G23 380 aa20.57■□□□□ 0.88
USP39-204ENST00000409766 PGLYRP2Q96PD5 576 aa20.57■□□□□ 0.88
USP39-204ENST00000409766 TSSK1BQ9BXA7 367 aa20.57■□□□□ 0.88
USP39-204ENST00000409766 CHKBQ9Y259 395 aa20.57■□□□□ 0.88
USP39-204ENST00000409766 ERVK-10P10266 1014 aa20.56■□□□□ 0.88
USP39-204ENST00000409766 USP46P62068 366 aa20.56■□□□□ 0.88
USP39-204ENST00000409766 NRG1Q02297 640 aaPredicted RBP20.56■□□□□ 0.88
USP39-204ENST00000409766 FAM171A1Q5VUB5 890 aa20.56■□□□□ 0.88
USP39-204ENST00000409766 CEP57Q86XR8 500 aa20.56■□□□□ 0.88
USP39-204ENST00000409766 ZNF398Q8TD17 642 aa20.56■□□□□ 0.88
USP39-204ENST00000409766 CASD1Q96PB1 797 aa20.56■□□□□ 0.88
USP39-204ENST00000409766 GPR62Q9BZJ7 368 aa20.56■□□□□ 0.88
USP39-204ENST00000409766 ECT2Q9H8V3 914 aa20.56■□□□□ 0.88
USP39-204ENST00000409766 NPHS2Q9NP85 383 aa20.56■□□□□ 0.88
USP39-204ENST00000409766 IL37Q9NZH6 218 aa20.56■□□□□ 0.88
USP39-204ENST00000409766 IL1RAPL1Q9NZN1 696 aa20.56■□□□□ 0.88
USP39-204ENST00000409766 TLR6Q9Y2C9 796 aa20.56■□□□□ 0.88
USP39-204ENST00000409766 PCDHB7Q9Y5E2 793 aa20.56■□□□□ 0.88
USP39-204ENST00000409766 HS3ST4Q9Y661 456 aa20.56■□□□□ 0.88
USP39-204ENST00000409766 HGSO14964 777 aaPredicted RBP20.56■□□□□ 0.88
USP39-204ENST00000409766 MAFKO60675 156 aa20.56■□□□□ 0.88
USP39-204ENST00000409766 USP1O94782 785 aa20.56■□□□□ 0.88
USP39-204ENST00000409766 IL1BP01584 269 aa20.56■□□□□ 0.88
USP39-204ENST00000409766 ALDOAP04075 364 aaKnown RBP20.56■□□□□ 0.88
USP39-204ENST00000409766 TROVE2P10155 538 aaKnown RBP eCLIP20.56■□□□□ 0.88
USP39-204ENST00000409766 CCNB1P14635 433 aa20.56■□□□□ 0.88
USP39-204ENST00000409766 ALDH3A1P30838 453 aa20.56■□□□□ 0.88
USP39-204ENST00000409766 FRG1Q14331 258 aaKnown RBP20.56■□□□□ 0.88
USP39-204ENST00000409766 ATPAF2Q8N5M1 289 aa20.56■□□□□ 0.88
USP39-204ENST00000409766 TTC9BQ8N6N2 239 aa20.56■□□□□ 0.88
USP39-204ENST00000409766 ATAD1Q8NBU5 361 aa20.56■□□□□ 0.88
USP39-204ENST00000409766 ARMC2Q8NEN0 867 aa20.56■□□□□ 0.88
USP39-204ENST00000409766 ACMSDQ8TDX5 336 aa20.56■□□□□ 0.88
USP39-204ENST00000409766 SLC39A13Q96H72 371 aa20.56■□□□□ 0.88
USP39-204ENST00000409766 C1orf74Q96LT6 269 aa20.56■□□□□ 0.88
USP39-204ENST00000409766 SLC39A8Q9C0K1 460 aa20.56■□□□□ 0.88
USP39-204ENST00000409766 NDFIP2Q9NV92 336 aa20.56■□□□□ 0.88
USP39-204ENST00000409766 TMEM51Q9NW97 253 aa20.56■□□□□ 0.88
USP39-204ENST00000409766 ZFATQ9P243 1243 aa20.56■□□□□ 0.88
USP39-204ENST00000409766 ZCWPW2A0A1B0GU75 182 aa20.55■□□□□ 0.88
USP39-204ENST00000409766 E9PAM4 449 aa20.55■□□□□ 0.88
USP39-204ENST00000409766 MOCS2O96007 188 aaPredicted RBP20.55■□□□□ 0.88
USP39-204ENST00000409766 NPY2RP49146 381 aa20.55■□□□□ 0.88
USP39-204ENST00000409766 TUBP50607 506 aa20.55■□□□□ 0.88
USP39-204ENST00000409766 MLLT6P55198 1093 aaPredicted RBP20.55■□□□□ 0.88
USP39-204ENST00000409766 OVGP1Q12889 678 aa20.55■□□□□ 0.88
USP39-204ENST00000409766 BFSP2Q13515 415 aa20.55■□□□□ 0.88
USP39-204ENST00000409766 PRPSAP1Q14558 356 aa20.55■□□□□ 0.88
USP39-204ENST00000409766 SETDB1Q15047 1291 aa20.55■□□□□ 0.88
USP39-204ENST00000409766 CERCAMQ5T4B2 595 aa20.55■□□□□ 0.88
USP39-204ENST00000409766 OTOP3Q7RTS5 596 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms