RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 PXNP49023 591 aaPredicted RBP20.4■□□□□ 0.86
PDLIM2-207ENST00000409417 SULT2A1Q06520 285 aa20.4■□□□□ 0.86
PDLIM2-207ENST00000409417 SEMA3BQ13214 749 aa20.4■□□□□ 0.86
PDLIM2-207ENST00000409417 RASSF3Q86WH2 238 aa20.4■□□□□ 0.86
PDLIM2-207ENST00000409417 PSTKQ8IV42 348 aaKnown RBP20.4■□□□□ 0.86
PDLIM2-207ENST00000409417 SPC24Q8NBT2 197 aa20.4■□□□□ 0.86
PDLIM2-207ENST00000409417 ALG14Q96F25 216 aa20.4■□□□□ 0.86
PDLIM2-207ENST00000409417 BTBD6Q96KE9 485 aa20.4■□□□□ 0.86
PDLIM2-207ENST00000409417 PEBP4Q96S96 227 aa20.4■□□□□ 0.86
PDLIM2-207ENST00000409417 EPAS1Q99814 870 aa20.4■□□□□ 0.86
PDLIM2-207ENST00000409417 TMEM245Q9H330 911 aa20.4■□□□□ 0.86
PDLIM2-207ENST00000409417 CD248Q9HCU0 757 aa20.4■□□□□ 0.86
PDLIM2-207ENST00000409417 LCMT1Q9UIC8 334 aa20.4■□□□□ 0.86
PDLIM2-207ENST00000409417 AP4E1Q9UPM8 1137 aa20.4■□□□□ 0.86
PDLIM2-207ENST00000409417 NEU3Q9UQ49 428 aa20.4■□□□□ 0.86
PDLIM2-207ENST00000409417 OR51B4Q9Y5P0 310 aa20.4■□□□□ 0.86
PDLIM2-207ENST00000409417 R4GN57 208 aa20.4■□□□□ 0.86
PDLIM2-207ENST00000409417 RHOQP17081 205 aa20.39■□□□□ 0.85
PDLIM2-207ENST00000409417 CYLC1P35663 651 aaPredicted RBP20.39■□□□□ 0.85
PDLIM2-207ENST00000409417 ECT2LQ008S8 904 aa20.39■□□□□ 0.85
PDLIM2-207ENST00000409417 STARD3Q14849 445 aa20.39■□□□□ 0.85
PDLIM2-207ENST00000409417 FNDC3BQ53EP0 1204 aaKnown RBP20.39■□□□□ 0.85
PDLIM2-207ENST00000409417 RNF219Q5W0B1 726 aaPredicted RBP20.39■□□□□ 0.85
PDLIM2-207ENST00000409417 ANO7Q6IWH7 933 aa20.39■□□□□ 0.85
PDLIM2-207ENST00000409417 CYP4V2Q6ZWL3 525 aaPredicted RBP20.39■□□□□ 0.85
PDLIM2-207ENST00000409417 WDR5BQ86VZ2 330 aa20.39■□□□□ 0.85
PDLIM2-207ENST00000409417 NLRP14Q86W24 1093 aa20.39■□□□□ 0.85
PDLIM2-207ENST00000409417 KDM1BQ8NB78 822 aa20.39■□□□□ 0.85
PDLIM2-207ENST00000409417 MUC3BQ9H195 1237 aa20.39■□□□□ 0.85
PDLIM2-207ENST00000409417 VPS28Q9UK41 221 aa20.39■□□□□ 0.85
PDLIM2-207ENST00000409417 PIEZO1Q92508 2521 aa20.38■□□□□ 0.85
PDLIM2-207ENST00000409417 TCRBV21S2A2A0A5A6 115 aa20.38■□□□□ 0.85
PDLIM2-207ENST00000409417 ILVBLA1L0T0 632 aa20.38■□□□□ 0.85
PDLIM2-207ENST00000409417 AXIN1O15169 862 aa20.38■□□□□ 0.85
PDLIM2-207ENST00000409417 SYNCRIPO60506 623 aaKnown RBP20.38■□□□□ 0.85
PDLIM2-207ENST00000409417 LILRB5O75023 590 aa20.38■□□□□ 0.85
PDLIM2-207ENST00000409417 RHOCP08134 193 aa20.38■□□□□ 0.85
PDLIM2-207ENST00000409417 PRKCHP24723 683 aa20.38■□□□□ 0.85
PDLIM2-207ENST00000409417 HTR7P34969 479 aa20.38■□□□□ 0.85
PDLIM2-207ENST00000409417 SPA17Q15506 151 aa20.38■□□□□ 0.85
PDLIM2-207ENST00000409417 BOLA3Q53S33 107 aa20.38■□□□□ 0.85
PDLIM2-207ENST00000409417 DAB2IPQ5VWQ8 1189 aa20.38■□□□□ 0.85
PDLIM2-207ENST00000409417 KIAA1211LQ6NV74 962 aa20.38■□□□□ 0.85
PDLIM2-207ENST00000409417 ZNF783Q6ZMS7 281 aa20.38■□□□□ 0.85
PDLIM2-207ENST00000409417 SLC35G2Q8TBE7 412 aa20.38■□□□□ 0.85
PDLIM2-207ENST00000409417 HMGB4Q8WW32 186 aa20.38■□□□□ 0.85
PDLIM2-207ENST00000409417 SNRNP25Q9BV90 132 aaKnown RBP20.38■□□□□ 0.85
PDLIM2-207ENST00000409417 TMEM248Q9NWD8 314 aa20.38■□□□□ 0.85
PDLIM2-207ENST00000409417 ERVW-1Q9UQF0 538 aa20.38■□□□□ 0.85
PDLIM2-207ENST00000409417 RAD54BQ9Y620 910 aa20.38■□□□□ 0.85
PDLIM2-207ENST00000409417 ZFHX2Q9C0A1 2572 aaPredicted RBP20.38■□□□□ 0.85
PDLIM2-207ENST00000409417 MYO15AQ9UKN7 3530 aa20.38■□□□□ 0.85
PDLIM2-207ENST00000409417 SOWAHDA6NJG2 315 aa20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 GOLGA6L6A8MZA4 724 aa20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 ZBTB24O43167 697 aaPredicted RBP20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 CREB3O43889 395 aa20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 SRPRAP08240 638 aaKnown RBP20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 IL1R2P27930 398 aa20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 EPHB2P29323 1055 aa20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 CNR2P34972 360 aa20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 CTSOP43234 321 aaPredicted RBP20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 MAPKAPK2P49137 400 aa20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 ST8SIA6P61647 398 aa20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 RHOT2Q8IXI1 618 aa20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 MDGA1Q8NFP4 955 aa20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 RFFLQ8WZ73 363 aa20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 MYO19Q96H55 970 aa20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 MRGPRX3Q96LB0 322 aa20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 SEMA4AQ9H3S1 761 aa20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 DHX35Q9H5Z1 703 aaKnown RBP20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 OSGEPQ9NPF4 335 aa20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 GPATCH2LQ9NWQ4 482 aa20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 EPN1Q9Y6I3 576 aaPredicted RBP20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 GPR179Q6PRD1 2367 aa20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 A0A0D9SEW6 157 aa20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 PROSCO94903 275 aa20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 EPHX1P07099 455 aa20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 HLA-EP13747 358 aa20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 TCF4P15884 667 aa20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 MAGEA1P43355 309 aa20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 TCEAL1Q15170 157 aa20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 CA9Q16790 459 aa20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 BAG1Q99933 345 aaPredicted RBP20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 C2orf49Q9BVC5 232 aaPredicted RBP20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 LUC7LQ9NQ29 371 aaKnown RBP20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 BCCIPQ9P287 314 aaKnown RBP eCLIP20.37■□□□□ 0.85
PDLIM2-207ENST00000409417 WDR87Q6ZQQ6 2873 aa20.36■□□□□ 0.85
PDLIM2-207ENST00000409417 DOCK4Q8N1I0 1966 aa20.36■□□□□ 0.85
PDLIM2-207ENST00000409417 PROB1E7EW31 1015 aa20.36■□□□□ 0.85
PDLIM2-207ENST00000409417 MTA2O94776 668 aa20.36■□□□□ 0.85
PDLIM2-207ENST00000409417 NDUFA10O95299 355 aa20.36■□□□□ 0.85
PDLIM2-207ENST00000409417 GABRG2P18507 467 aa20.36■□□□□ 0.85
PDLIM2-207ENST00000409417 VASPP50552 380 aaPredicted RBP20.36■□□□□ 0.85
PDLIM2-207ENST00000409417 ZNF135P52742 658 aaPredicted RBP20.36■□□□□ 0.85
PDLIM2-207ENST00000409417 CAMK2GQ13555 558 aaPredicted RBP20.36■□□□□ 0.85
PDLIM2-207ENST00000409417 RTL3Q8N8U3 475 aaKnown RBP20.36■□□□□ 0.85
PDLIM2-207ENST00000409417 RPL10LQ96L21 214 aaKnown RBP20.36■□□□□ 0.85
PDLIM2-207ENST00000409417 CATSPERBQ9H7T0 1116 aa20.36■□□□□ 0.85
PDLIM2-207ENST00000409417 SUN2Q9UH99 717 aa20.36■□□□□ 0.85
PDLIM2-207ENST00000409417 SLCO3A1Q9UIG8 710 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms