RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 RING1Q06587 406 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 TAF10Q12962 218 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 DUSP4Q13115 394 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 MTM1Q13496 603 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 MPP2Q14168 576 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 TRIP4Q15650 581 aaPredicted RBP6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 TCTN1Q2MV58 587 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 KBTBD12Q3ZCT8 623 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 TRIM60Q495X7 471 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 RTP2Q5QGT7 225 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 LCE2CQ5TA81 110 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 MANEALQ5VSG8 457 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 TTC39BQ5VTQ0 682 aaPredicted RBP6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 SDHAF4Q5VUM1 108 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 KIAA1841Q6NSI8 718 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 TIGD7Q6NT04 549 aaPredicted RBP6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 ZNF449Q6P9G9 518 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 RNF19BQ6ZMZ0 732 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 UNC5AQ6ZN44 842 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 ZNF534Q76KX8 674 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 TAS1R1Q7RTX1 841 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 TAX1BP1Q86VP1 789 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 ANKRD42Q8N9B4 389 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 ANKLE1Q8NAG6 615 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 GSDMBQ8TAX9 411 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 DENND1AQ8TEH3 1009 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 TOP1MTQ969P6 601 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 TTC17Q96AE7 1141 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 MRRFQ96E11 262 aaKnown RBP6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 STAMBPL1Q96FJ0 436 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 CFAP36Q96G28 342 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 BTN2A3PQ96KV6 586 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 SEPT5Q99719 369 aaPredicted RBP6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 UBE2OQ9C0C9 1292 aaKnown RBP6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 NSRP1Q9H0G5 558 aaKnown RBP6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 RABEP2Q9H5N1 569 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 RETREG1Q9H6L5 497 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 OSER1Q9NX31 292 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 MOCS1Q9NZB8 636 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 BFARQ9NZS9 450 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 GMIPQ9P107 970 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 HSFX1Q9UBD0 423 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 SLC27A5Q9Y2P5 690 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 AAR2Q9Y312 384 aaKnown RBP6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 PCDHA11Q9Y5I1 949 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 E9PAM4 449 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 TM9SF1O15321 606 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 ZBTB24O43167 697 aaPredicted RBP6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 MSI1O43347 362 aaKnown RBP6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 KRT38O76015 456 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 ALDH1A2O94788 518 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 ZWINTO95229 277 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 AP2A1O95782 977 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 EFEMP2O95967 443 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 JCHAINP01591 159 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 POLBP06746 335 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 SNRPAP09012 282 aaKnown RBP6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 ZDHHC11BP0C7U3 371 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 CCNB1P14635 433 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 RHOQP17081 205 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 CA4P22748 312 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 CNTFP26441 200 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 PSMB4P28070 264 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 GRIA1P42261 906 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 IFNAR2P48551 515 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 GPR15P49685 360 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 SERPINB9P50453 376 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 NDST2P52849 883 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 PPARDQ03181 441 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 EFEMP1Q12805 493 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 DNAJC3Q13217 504 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 NAB1Q13506 487 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 SPARCL1Q14515 664 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 SEPT7Q16181 437 aaKnown RBP6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 ANO4Q32M45 955 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 PROX2Q3B8N5 592 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 C10orf120Q5SQS8 335 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 RASIP1Q5U651 963 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 STEAP4Q687X5 459 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 TPGS2Q68CL5 300 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 CASC4Q6P4E1 433 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 FOXR1Q6PIV2 292 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 RSPO2Q6UXX9 243 aaPredicted RBP6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.42□□□□□ -1.382e-7■■■■□ 24
GTF3C3-202ENST00000409364 PIGWQ7Z7B1 504 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 LINC00523Q86TU6 105 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 CTAGE3PQ8IX95 158 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 TP53INP2Q8IXH6 220 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 CACNA2D3Q8IZS8 1091 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 UMODL1-AS1Q8N2C9 162 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 AGGF1Q8N302 714 aaeCLIP6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 NPWQ8N729 165 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 RTL3Q8N8U3 475 aaKnown RBP6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 ANKS4BQ8N8V4 417 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 PDZD8Q8NEN9 1154 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 ZSCAN18Q8TBC5 510 aaPredicted RBP6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 MGARPQ8TDB4 240 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 OVCA2Q8WZ82 227 aa6.42□□□□□ -1.38
GTF3C3-202ENST00000409364 CDKL2Q92772 493 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms