RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 C2orf78A6NCI8 922 aa26.26■■□□□ 1.79
CPNE1-205ENST00000401607 ZBTB24O43167 697 aaPredicted RBP26.26■■□□□ 1.79
CPNE1-205ENST00000401607 MAFKO60675 156 aa26.26■■□□□ 1.79
CPNE1-205ENST00000401607 CD68P34810 354 aaPredicted RBP26.26■■□□□ 1.79
CPNE1-205ENST00000401607 BMPR1AP36894 532 aa26.26■■□□□ 1.79
CPNE1-205ENST00000401607 EMC10Q5UCC4 262 aa26.26■■□□□ 1.79
CPNE1-205ENST00000401607 LILRA6Q6PI73 481 aa26.26■■□□□ 1.79
CPNE1-205ENST00000401607 KDM7AQ6ZMT4 941 aa26.26■■□□□ 1.79
CPNE1-205ENST00000401607 CHSY1Q86X52 802 aa26.26■■□□□ 1.79
CPNE1-205ENST00000401607 UMODL1-AS1Q8N2C9 162 aa26.26■■□□□ 1.79
CPNE1-205ENST00000401607 PDCD7Q8N8D1 485 aaKnown RBP26.26■■□□□ 1.79
CPNE1-205ENST00000401607 KLHL5Q96PQ7 755 aa26.26■■□□□ 1.79
CPNE1-205ENST00000401607 VAT1Q99536 393 aa26.26■■□□□ 1.79
CPNE1-205ENST00000401607 RNF38Q9H0F5 515 aa26.26■■□□□ 1.79
CPNE1-205ENST00000401607 ZNF212Q9UDV6 495 aa26.26■■□□□ 1.79
CPNE1-205ENST00000401607 TRHDEQ9UKU6 1024 aa26.26■■□□□ 1.79
CPNE1-205ENST00000401607 ANAPC1Q9H1A4 1944 aa26.26■■□□□ 1.79
CPNE1-205ENST00000401607 TSHRP16473 764 aa26.25■■□□□ 1.79
CPNE1-205ENST00000401607 CTNNB1P35222 781 aa26.25■■□□□ 1.79
CPNE1-205ENST00000401607 PPP3CCP48454 512 aa26.25■■□□□ 1.79
CPNE1-205ENST00000401607 ERVFC1P60507 584 aa26.25■■□□□ 1.79
CPNE1-205ENST00000401607 IFI35P80217 286 aaPredicted RBP26.25■■□□□ 1.79
CPNE1-205ENST00000401607 CDK16Q00536 496 aa26.25■■□□□ 1.79
CPNE1-205ENST00000401607 TFAP2DQ7Z6R9 452 aa26.25■■□□□ 1.79
CPNE1-205ENST00000401607 CCDC77Q9BR77 488 aa26.25■■□□□ 1.79
CPNE1-205ENST00000401607 IL21Q9HBE4 155 aa26.25■■□□□ 1.79
CPNE1-205ENST00000401607 ALG13Q9NP73 1137 aaKnown RBP26.25■■□□□ 1.79
CPNE1-205ENST00000401607 UXTQ9UBK9 157 aaPredicted RBP26.25■■□□□ 1.79
CPNE1-205ENST00000401607 CTNNAL1Q9UBT7 734 aa26.25■■□□□ 1.79
CPNE1-205ENST00000401607 AGTP01019 485 aa26.25■■□□□ 1.79
CPNE1-205ENST00000401607 JCHAINP01591 159 aa26.25■■□□□ 1.79
CPNE1-205ENST00000401607 F11P03951 625 aa26.25■■□□□ 1.79
CPNE1-205ENST00000401607 IVLP07476 585 aa26.25■■□□□ 1.79
CPNE1-205ENST00000401607 TACR2P21452 398 aa26.25■■□□□ 1.79
CPNE1-205ENST00000401607 GCAP28676 217 aa26.25■■□□□ 1.79
CPNE1-205ENST00000401607 SKOR1P84550 965 aa26.25■■□□□ 1.79
CPNE1-205ENST00000401607 TEKT5Q96M29 485 aa26.25■■□□□ 1.79
CPNE1-205ENST00000401607 AGAP3Q96P47 875 aa26.25■■□□□ 1.79
CPNE1-205ENST00000401607 TCF25Q9BQ70 676 aa26.25■■□□□ 1.79
CPNE1-205ENST00000401607 GBA3Q9H227 469 aa26.25■■□□□ 1.79
CPNE1-205ENST00000401607 EURLQ9NYK6 297 aa26.25■■□□□ 1.79
CPNE1-205ENST00000401607 ACSL4O60488 711 aa26.24■■□□□ 1.79
CPNE1-205ENST00000401607 HPDP32754 393 aaPredicted RBP26.24■■□□□ 1.79
CPNE1-205ENST00000401607 LMAN1P49257 510 aa26.24■■□□□ 1.79
CPNE1-205ENST00000401607 PAPOLAP51003 745 aaKnown RBP26.24■■□□□ 1.79
CPNE1-205ENST00000401607 FAM133BQ5BKY9 247 aaKnown RBP26.24■■□□□ 1.79
CPNE1-205ENST00000401607 C3orf62Q6ZUJ4 267 aa26.24■■□□□ 1.79
CPNE1-205ENST00000401607 ITIH5Q86UX2 942 aa26.24■■□□□ 1.79
CPNE1-205ENST00000401607 PALM2Q8IXS6 379 aa26.24■■□□□ 1.79
CPNE1-205ENST00000401607 PLD4Q96BZ4 506 aa26.24■■□□□ 1.79
CPNE1-205ENST00000401607 RPRD1AQ96P16 312 aaPredicted RBP26.24■■□□□ 1.79
CPNE1-205ENST00000401607 XAB2Q9HCS7 855 aaKnown RBP26.24■■□□□ 1.79
CPNE1-205ENST00000401607 RSPH14Q9UHP6 348 aa26.24■■□□□ 1.79
CPNE1-205ENST00000401607 RABGEF1Q9UJ41 708 aa26.24■■□□□ 1.79
CPNE1-205ENST00000401607 LZTS1Q9Y250 596 aa26.24■■□□□ 1.79
CPNE1-205ENST00000401607 EXOC1LA0A1B0GW35 172 aa26.23■■□□□ 1.79
CPNE1-205ENST00000401607 STC2O76061 302 aa26.23■■□□□ 1.79
CPNE1-205ENST00000401607 SLC6A4P31645 630 aa26.23■■□□□ 1.79
CPNE1-205ENST00000401607 PHBP35232 272 aa26.23■■□□□ 1.79
CPNE1-205ENST00000401607 NDST2P52849 883 aa26.23■■□□□ 1.79
CPNE1-205ENST00000401607 CIR1Q86X95 450 aaPredicted RBP26.23■■□□□ 1.79
CPNE1-205ENST00000401607 CNTD1Q8N815 330 aa26.23■■□□□ 1.79
CPNE1-205ENST00000401607 SIGLEC10Q96LC7 697 aa26.23■■□□□ 1.79
CPNE1-205ENST00000401607 KLF16Q9BXK1 252 aaPredicted RBP26.23■■□□□ 1.79
CPNE1-205ENST00000401607 GKN1Q9NS71 199 aa26.23■■□□□ 1.79
CPNE1-205ENST00000401607 LGALS13Q9UHV8 139 aa26.23■■□□□ 1.79
CPNE1-205ENST00000401607 IRAK3Q9Y616 596 aa26.23■■□□□ 1.79
CPNE1-205ENST00000401607 OBSL1O75147 1896 aa26.23■■□□□ 1.79
CPNE1-205ENST00000401607 MYO18AQ92614 2054 aaKnown RBP26.23■■□□□ 1.79
CPNE1-205ENST00000401607 KLKB1P03952 638 aa26.23■■□□□ 1.79
CPNE1-205ENST00000401607 ADH1AP07327 375 aa26.23■■□□□ 1.79
CPNE1-205ENST00000401607 NFKB1P19838 968 aa26.23■■□□□ 1.79
CPNE1-205ENST00000401607 DNAJB1P25685 340 aa26.23■■□□□ 1.79
CPNE1-205ENST00000401607 HARS2P49590 506 aaKnown RBP26.23■■□□□ 1.79
CPNE1-205ENST00000401607 ATP1A2P50993 1020 aa26.23■■□□□ 1.79
CPNE1-205ENST00000401607 C5orf22Q49AR2 442 aa26.23■■□□□ 1.79
CPNE1-205ENST00000401607 ITPRIPL1Q6GPH6 555 aa26.23■■□□□ 1.79
CPNE1-205ENST00000401607 ZNF419Q96HQ0 510 aaPredicted RBP26.23■■□□□ 1.79
CPNE1-205ENST00000401607 LINC01553A4QN01 128 aa26.22■■□□□ 1.79
CPNE1-205ENST00000401607 MATN3O15232 486 aa26.22■■□□□ 1.79
CPNE1-205ENST00000401607 MLNP12872 115 aa26.22■■□□□ 1.79
CPNE1-205ENST00000401607 CCNB1P14635 433 aa26.22■■□□□ 1.79
CPNE1-205ENST00000401607 SARNPP82979 210 aaKnown RBP26.22■■□□□ 1.79
CPNE1-205ENST00000401607 LRRC49Q8IUZ0 686 aa26.22■■□□□ 1.79
CPNE1-205ENST00000401607 USP33Q8TEY7 942 aa26.22■■□□□ 1.79
CPNE1-205ENST00000401607 WBP2Q969T9 261 aa26.22■■□□□ 1.79
CPNE1-205ENST00000401607 LRRC39Q96DD0 335 aa26.22■■□□□ 1.79
CPNE1-205ENST00000401607 IL12RB2Q99665 862 aa26.22■■□□□ 1.79
CPNE1-205ENST00000401607 PLAC1Q9HBJ0 212 aa26.22■■□□□ 1.79
CPNE1-205ENST00000401607 ENTPD7Q9NQZ7 604 aa26.22■■□□□ 1.79
CPNE1-205ENST00000401607 PSD3Q9NYI0 1048 aa26.22■■□□□ 1.79
CPNE1-205ENST00000401607 ASB3Q9Y575 518 aa26.22■■□□□ 1.79
CPNE1-205ENST00000401607 HIDE1A8MVS5 230 aa26.21■■□□□ 1.79
CPNE1-205ENST00000401607 F5H5T6 163 aa26.21■■□□□ 1.79
CPNE1-205ENST00000401607 CDH16O75309 829 aa26.21■■□□□ 1.79
CPNE1-205ENST00000401607 LRRC8BQ6P9F7 803 aa26.21■■□□□ 1.79
CPNE1-205ENST00000401607 SPRED2Q7Z698 418 aa26.21■■□□□ 1.79
CPNE1-205ENST00000401607 DENND1CQ8IV53 801 aa26.21■■□□□ 1.79
CPNE1-205ENST00000401607 LGI2Q8N0V4 545 aa26.21■■□□□ 1.79
CPNE1-205ENST00000401607 MPP5Q8N3R9 675 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms