RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 SLC28A3Q9HAS3 691 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 PLLPQ9Y342 182 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 NUMBLQ9Y6R0 609 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 H7C4K7 107 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 HCRTO43612 131 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 TBC1D4O60343 1298 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 GCATO75600 419 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 KRT38O76015 456 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 GM2AP17900 193 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 TPSB2P20231 275 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 MAGEA3P43357 314 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 UBE3AQ05086 875 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 TPSAB1Q15661 275 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 LRIT3Q3SXY7 679 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 SYCP2LQ5T4T6 812 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 PPP1R26Q5T8A7 1209 aaPredicted RBP16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 ATG16L1Q676U5 607 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 KIAA1841Q6NSI8 718 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 C12orf29Q8N999 325 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 SPPL3Q8TCT6 385 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 MIEF2Q96C03 454 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 DENND2DQ9H6A0 471 aaPredicted RBP16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 ARL8BQ9NVJ2 186 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 HESX1Q9UBX0 185 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 CDH9Q9ULB4 789 aa16.35■□□□□ 0.21
CHRFAM7A-203ENST00000401522 CHD9Q3L8U1 2897 aa16.34■□□□□ 0.21
CHRFAM7A-203ENST00000401522 DNAJB2P25686 324 aa16.34■□□□□ 0.21
CHRFAM7A-203ENST00000401522 SERPINB3P29508 390 aa16.34■□□□□ 0.21
CHRFAM7A-203ENST00000401522 PTPN9P43378 593 aa16.34■□□□□ 0.21
CHRFAM7A-203ENST00000401522 NR2C2P49116 596 aa16.34■□□□□ 0.21
CHRFAM7A-203ENST00000401522 GLUD2P49448 558 aa16.34■□□□□ 0.21
CHRFAM7A-203ENST00000401522 CA9Q16790 459 aa16.34■□□□□ 0.21
CHRFAM7A-203ENST00000401522 CMPK2Q5EBM0 449 aa16.34■□□□□ 0.21
CHRFAM7A-203ENST00000401522 FAXCQ5TGI0 409 aa16.34■□□□□ 0.21
CHRFAM7A-203ENST00000401522 PPP2R2DQ66LE6 453 aa16.34■□□□□ 0.21
CHRFAM7A-203ENST00000401522 ACOT1Q86TX2 421 aa16.34■□□□□ 0.21
CHRFAM7A-203ENST00000401522 TTC30AQ86WT1 665 aa16.34■□□□□ 0.21
CHRFAM7A-203ENST00000401522 OR10T2Q8NGX3 314 aa16.34■□□□□ 0.21
CHRFAM7A-203ENST00000401522 RAB3IL1Q8TBN0 382 aa16.34■□□□□ 0.21
CHRFAM7A-203ENST00000401522 SLC35F5Q8WV83 523 aa16.34■□□□□ 0.21
CHRFAM7A-203ENST00000401522 KHSRPQ92945 711 aaKnown RBP eCLIP16.34■□□□□ 0.21
CHRFAM7A-203ENST00000401522 C7orf26Q96N11 449 aa16.34■□□□□ 0.21
CHRFAM7A-203ENST00000401522 MIPEPQ99797 713 aa16.34■□□□□ 0.21
CHRFAM7A-203ENST00000401522 DPEP3Q9H4B8 488 aa16.34■□□□□ 0.21
CHRFAM7A-203ENST00000401522 PLAC1Q9HBJ0 212 aa16.34■□□□□ 0.21
CHRFAM7A-203ENST00000401522 XAB2Q9HCS7 855 aaKnown RBP16.34■□□□□ 0.21
CHRFAM7A-203ENST00000401522 KCNK4Q9NYG8 393 aa16.34■□□□□ 0.21
CHRFAM7A-203ENST00000401522 COLQQ9Y215 455 aaPredicted RBP16.34■□□□□ 0.21
CHRFAM7A-203ENST00000401522 BACE2Q9Y5Z0 518 aa16.34■□□□□ 0.21
CHRFAM7A-203ENST00000401522 CXorf49A8MYA2 514 aaPredicted RBP16.33■□□□□ 0.21
CHRFAM7A-203ENST00000401522 H3BNC9 293 aa16.33■□□□□ 0.21
CHRFAM7A-203ENST00000401522 LIN7AO14910 233 aaPredicted RBP16.33■□□□□ 0.21
CHRFAM7A-203ENST00000401522 KIF1CO43896 1103 aaKnown RBP16.33■□□□□ 0.21
CHRFAM7A-203ENST00000401522 CTSAP10619 480 aa16.33■□□□□ 0.21
CHRFAM7A-203ENST00000401522 PTPN1P18031 435 aaKnown RBP16.33■□□□□ 0.21
CHRFAM7A-203ENST00000401522 ACAT1P24752 427 aaKnown RBP16.33■□□□□ 0.21
CHRFAM7A-203ENST00000401522 CYP2F1P24903 491 aa16.33■□□□□ 0.21
CHRFAM7A-203ENST00000401522 SERPINB9P50453 376 aa16.33■□□□□ 0.21
CHRFAM7A-203ENST00000401522 HDAC4P56524 1084 aa16.33■□□□□ 0.21
CHRFAM7A-203ENST00000401522 CDK18Q07002 472 aa16.33■□□□□ 0.21
CHRFAM7A-203ENST00000401522 TAF11Q15544 211 aa16.33■□□□□ 0.21
CHRFAM7A-203ENST00000401522 DPYSL2Q16555 572 aa16.33■□□□□ 0.21
CHRFAM7A-203ENST00000401522 CTXN3Q4LDR2 81 aa16.33■□□□□ 0.21
CHRFAM7A-203ENST00000401522 ZNF280DQ6N043 979 aa16.33■□□□□ 0.21
CHRFAM7A-203ENST00000401522 UNC5AQ6ZN44 842 aa16.33■□□□□ 0.21
CHRFAM7A-203ENST00000401522 C4orf50Q6ZRC1 276 aa16.33■□□□□ 0.21
CHRFAM7A-203ENST00000401522 BZW1Q7L1Q6 419 aaKnown RBP16.33■□□□□ 0.21
CHRFAM7A-203ENST00000401522 B3GALNT2Q8NCR0 500 aa16.33■□□□□ 0.21
CHRFAM7A-203ENST00000401522 GSDMBQ8TAX9 411 aa16.33■□□□□ 0.21
CHRFAM7A-203ENST00000401522 CCDC110Q8TBZ0 833 aa16.33■□□□□ 0.21
CHRFAM7A-203ENST00000401522 OXNAD1Q96HP4 312 aaPredicted RBP16.33■□□□□ 0.21
CHRFAM7A-203ENST00000401522 CADM1Q9BY67 442 aaKnown RBP16.33■□□□□ 0.21
CHRFAM7A-203ENST00000401522 ZBP1Q9H171 429 aa16.33■□□□□ 0.21
CHRFAM7A-203ENST00000401522 DCLRE1BQ9H816 532 aa16.33■□□□□ 0.21
CHRFAM7A-203ENST00000401522 LRRC42Q9Y546 428 aa16.33■□□□□ 0.21
CHRFAM7A-203ENST00000401522 PLXNA4Q9HCM2 1894 aa16.33■□□□□ 0.2
CHRFAM7A-203ENST00000401522 FAM159BA6NKW6 160 aa16.33■□□□□ 0.2
CHRFAM7A-203ENST00000401522 OR6C75A6NL08 312 aa16.33■□□□□ 0.2
CHRFAM7A-203ENST00000401522 PAPSS1O43252 624 aaPredicted RBP16.33■□□□□ 0.2
CHRFAM7A-203ENST00000401522 LILRB3O75022 631 aa16.33■□□□□ 0.2
CHRFAM7A-203ENST00000401522 RFPL1O75677 317 aa16.33■□□□□ 0.2
CHRFAM7A-203ENST00000401522 SCNN1AP37088 669 aa16.33■□□□□ 0.2
CHRFAM7A-203ENST00000401522 INTS6LQ5JSJ4 861 aaKnown RBP16.33■□□□□ 0.2
CHRFAM7A-203ENST00000401522 ARHGAP17Q68EM7 881 aa16.33■□□□□ 0.2
CHRFAM7A-203ENST00000401522 FAM171BQ6P995 826 aa16.33■□□□□ 0.2
CHRFAM7A-203ENST00000401522 CDHR3Q6ZTQ4 885 aa16.33■□□□□ 0.2
CHRFAM7A-203ENST00000401522 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.33■□□□□ 0.2
CHRFAM7A-203ENST00000401522 FBXO22Q8NEZ5 403 aa16.33■□□□□ 0.2
CHRFAM7A-203ENST00000401522 KCNV2Q8TDN2 545 aa16.33■□□□□ 0.2
CHRFAM7A-203ENST00000401522 TIFAQ96CG3 184 aa16.33■□□□□ 0.2
CHRFAM7A-203ENST00000401522 QKIQ96PU8 341 aaKnown RBP eCLIP16.33■□□□□ 0.2
CHRFAM7A-203ENST00000401522 PKMYT1Q99640 499 aa16.33■□□□□ 0.2
CHRFAM7A-203ENST00000401522 EBNA1BP2Q99848 306 aaKnown RBP16.33■□□□□ 0.2
CHRFAM7A-203ENST00000401522 SYT15Q9BQS2 421 aa16.33■□□□□ 0.2
CHRFAM7A-203ENST00000401522 MMADHCQ9H3L0 296 aaPredicted RBP16.33■□□□□ 0.2
CHRFAM7A-203ENST00000401522 CRTAC1Q9NQ79 661 aa16.33■□□□□ 0.2
CHRFAM7A-203ENST00000401522 MRPL17Q9NRX2 175 aaKnown RBP16.33■□□□□ 0.2
CHRFAM7A-203ENST00000401522 SIRPGQ9P1W8 387 aa16.33■□□□□ 0.2
CHRFAM7A-203ENST00000401522 MTRRQ9UBK8 725 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms