RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 KCNN4O15554 427 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 CYP7B1O75881 506 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 GPR15P49685 360 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 ROR2Q01974 943 aaKnown RBP8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 KDM7AQ6ZMT4 941 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 PIGOQ8TEQ8 1089 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 TMCO6Q96DC7 493 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 ASB2Q96Q27 587 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 MUC3BQ9H195 1237 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 NOL11Q9H8H0 719 aaKnown RBP8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 ARMCX1Q9P291 453 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 TSR3Q9UJK0 312 aaKnown RBP8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 C3orf18Q9UK00 162 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 INTS1Q8N201 2190 aaKnown RBP8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 EEF1A1P68104 462 aaKnown RBP8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 NR6A1Q15406 480 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 EEF1A1P5Q5VTE0 462 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 NAPEPLDQ6IQ20 393 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 CEP97Q8IW35 865 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 B3GALNT2Q8NCR0 500 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 UBE2E3Q969T4 207 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 MARCOQ9UEW3 520 aaPredicted RBP8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 KCNS2Q9ULS6 477 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 ZC3H11AO75152 810 aaKnown RBP eCLIP8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 ASNSP08243 561 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 NR2F6P10588 404 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 IL1R1P14778 569 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 PECAM1P16284 738 aaPredicted RBP8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 MTA1Q13330 715 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 ZNF772Q68DY9 489 aaPredicted RBP8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 FBXO38Q6PIJ6 1188 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 ASB15Q8WXK1 588 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 FOXP1Q9H334 677 aaPredicted RBP8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 FANCFQ9NPI8 374 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 PAK5Q9P286 719 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 EFCAB5A4FU69 1503 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 ATP10DQ9P241 1426 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 VSTM5A8MXK1 200 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 PAX3P23760 479 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 PPP3R1P63098 170 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 SNAPC1Q16533 368 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 ZNF767PQ75MW2 155 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 METTL5Q9NRN9 209 aaKnown RBP8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 CFAP97Q9P2B7 532 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 HECW1Q76N89 1606 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 MATN2O00339 956 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 FAM228BP0C875 321 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 DNASE1L1P49184 302 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 PLA2G4FQ68DD2 849 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 TPD52L3Q96J77 140 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 RIT2Q99578 217 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 C1QTNF7Q9BXJ2 289 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 ATXN10Q9UBB4 475 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 IKZF3Q9UKT9 509 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 SNX24Q9Y343 169 aa8.73□□□□□ -1.01
CACNA1C-220ENST00000399655 ARPC2O15144 300 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 PTPN7P35236 360 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 MAPK12P53778 367 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 TBCELQ5QJ74 424 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 PCDHGB2Q9Y5G2 931 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 TEX13CA0A0J9YWL9 993 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 MUSKO15146 869 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 ME2P23368 584 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 THOP1P52888 689 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 CRISP1P54107 249 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 MYO1HQ8N1T3 1032 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 SYNPOQ8N3V7 929 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 LINS1Q8NG48 757 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 PRICKLE1Q96MT3 831 aaPredicted RBP8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 SHCBP1LQ9BZQ2 653 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 MYO15BQ96JP2 1530 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 SLC2A3P11169 496 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 RNF43Q68DV7 783 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 XKRXQ6PP77 449 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 MRPL41Q8IXM3 137 aaKnown RBP8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 CFAP206Q8IYR0 622 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 FRMD8P1Q9BZ68 369 aaPredicted RBP8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 ZNF408Q9H9D4 720 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 FAM105AQ9NUU6 356 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 C2orf78A6NCI8 922 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 CDC42EP1Q00587 391 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 RC3H1Q5TC82 1133 aaKnown RBP8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 FRMD7Q6ZUT3 714 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 GALNT7Q86SF2 657 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 VSTM4Q8IW00 320 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 SLC44A3Q8N4M1 653 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 SLC7A14Q8TBB6 771 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 DHRS1Q96LJ7 313 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 SLC2A5P22732 501 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 ATXN1P54253 815 aaKnown RBP8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 PIGHQ14442 188 aaPredicted RBP8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 SPPL2AQ8TCT8 520 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 PDGFCQ9NRA1 345 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 SLC24A2Q9UI40 661 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 PCDHGA5Q9Y5G8 931 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 SMARCA2P51531 1590 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 ACOX1Q15067 660 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 SCARA5Q6ZMJ2 495 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 C2orf40Q9H1Z8 148 aa8.72□□□□□ -1.01
CACNA1C-220ENST00000399655 LMBRD1Q9NUN5 540 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms