RNA–Protein interactions for RNA: ENST00000398652.7

FAM3B-204, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 1 (best) BASIC

Gene FAM3B, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-204ENST00000398652 UBXN6Q9BZV1 441 aa14.28□□□□□ -0.12
FAM3B-204ENST00000398652 LRRC27Q9C0I9 530 aa14.28□□□□□ -0.12
FAM3B-204ENST00000398652 DNAI2Q9GZS0 605 aa14.28□□□□□ -0.12
FAM3B-204ENST00000398652 TFIP11Q9UBB9 837 aaKnown RBP14.28□□□□□ -0.12
FAM3B-204ENST00000398652 INTS6Q9UL03 887 aaKnown RBP14.28□□□□□ -0.12
FAM3B-204ENST00000398652 ERVW-1Q9UQF0 538 aa14.28□□□□□ -0.12
FAM3B-204ENST00000398652 CLIC4Q9Y696 253 aa14.28□□□□□ -0.12
FAM3B-204ENST00000398652 IRAK2O43187 625 aa14.27□□□□□ -0.13
FAM3B-204ENST00000398652 EFSO43281 561 aa14.27□□□□□ -0.13
FAM3B-204ENST00000398652 IL1BP01584 269 aa14.27□□□□□ -0.13
FAM3B-204ENST00000398652 SRPRAP08240 638 aaKnown RBP14.27□□□□□ -0.13
FAM3B-204ENST00000398652 THEGLP0DJG4 465 aa14.27□□□□□ -0.13
FAM3B-204ENST00000398652 CR2P20023 1033 aa14.27□□□□□ -0.13
FAM3B-204ENST00000398652 TGM2P21980 687 aa14.27□□□□□ -0.13
FAM3B-204ENST00000398652 INHBCP55103 352 aa14.27□□□□□ -0.13
FAM3B-204ENST00000398652 TLE1Q04724 770 aa14.27□□□□□ -0.13
FAM3B-204ENST00000398652 KCNMA1Q12791 1236 aa14.27□□□□□ -0.13
FAM3B-204ENST00000398652 SERINC3Q13530 473 aa14.27□□□□□ -0.13
FAM3B-204ENST00000398652 ELAVL3Q14576 367 aaKnown RBP14.27□□□□□ -0.13
FAM3B-204ENST00000398652 KMT5BQ4FZB7 885 aa14.27□□□□□ -0.13
FAM3B-204ENST00000398652 PM20D1Q6GTS8 502 aa14.27□□□□□ -0.13
FAM3B-204ENST00000398652 RFWD3Q6PCD5 774 aa14.27□□□□□ -0.13
FAM3B-204ENST00000398652 STK40Q8N2I9 435 aa14.27□□□□□ -0.13
FAM3B-204ENST00000398652 RNF139Q8WU17 664 aa14.27□□□□□ -0.13
FAM3B-204ENST00000398652 SGF29Q96ES7 293 aa14.27□□□□□ -0.13
FAM3B-204ENST00000398652 CYP3A43Q9HB55 503 aa14.27□□□□□ -0.13
FAM3B-204ENST00000398652 SFMBT1Q9UHJ3 866 aa14.27□□□□□ -0.13
FAM3B-204ENST00000398652 CA5BQ9Y2D0 317 aa14.27□□□□□ -0.13
FAM3B-204ENST00000398652 CREBBPQ92793 2442 aa14.27□□□□□ -0.13
FAM3B-204ENST00000398652 SCN8AQ9UQD0 1980 aa14.26□□□□□ -0.13
FAM3B-204ENST00000398652 PMS2P1A4D2B8 440 aa14.26□□□□□ -0.13
FAM3B-204ENST00000398652 NEMP2A6NFY4 417 aa14.26□□□□□ -0.13
FAM3B-204ENST00000398652 PLRG1O43660 514 aaKnown RBP14.26□□□□□ -0.13
FAM3B-204ENST00000398652 RNGTTO60942 597 aaKnown RBP14.26□□□□□ -0.13
FAM3B-204ENST00000398652 RTN2O75298 545 aa14.26□□□□□ -0.13
FAM3B-204ENST00000398652 TNFSF15O95150 251 aa14.26□□□□□ -0.13
FAM3B-204ENST00000398652 GJB6O95452 261 aa14.26□□□□□ -0.13
FAM3B-204ENST00000398652 ZBED1O96006 694 aa14.26□□□□□ -0.13
FAM3B-204ENST00000398652 FAM87AP0C7U9 286 aa14.26□□□□□ -0.13
FAM3B-204ENST00000398652 SLC6A4P31645 630 aa14.26□□□□□ -0.13
FAM3B-204ENST00000398652 PIK3CAP42336 1068 aa14.26□□□□□ -0.13
FAM3B-204ENST00000398652 CTSOP43234 321 aaPredicted RBP14.26□□□□□ -0.13
FAM3B-204ENST00000398652 TKTL1P51854 596 aa14.26□□□□□ -0.13
FAM3B-204ENST00000398652 DLG4P78352 724 aa14.26□□□□□ -0.13
FAM3B-204ENST00000398652 POM121L1PQ3SYA9 428 aa14.26□□□□□ -0.13
FAM3B-204ENST00000398652 FAM133BQ5BKY9 247 aaKnown RBP14.26□□□□□ -0.13
FAM3B-204ENST00000398652 FOXR1Q6PIV2 292 aa14.26□□□□□ -0.13
FAM3B-204ENST00000398652 RBM44Q6ZP01 1051 aaKnown RBP14.26□□□□□ -0.13
FAM3B-204ENST00000398652 SV2AQ7L0J3 742 aa14.26□□□□□ -0.13
FAM3B-204ENST00000398652 BHLHA9Q7RTU4 235 aa14.26□□□□□ -0.13
FAM3B-204ENST00000398652 PDILTQ8N807 584 aa14.26□□□□□ -0.13
FAM3B-204ENST00000398652 TMEM145Q8NBT3 493 aa14.26□□□□□ -0.13
FAM3B-204ENST00000398652 HJURPQ8NCD3 748 aaPredicted RBP14.26□□□□□ -0.13
FAM3B-204ENST00000398652 WDR36Q8NI36 951 aaKnown RBP14.26□□□□□ -0.13
FAM3B-204ENST00000398652 PTPRN2Q92932 1015 aa14.26□□□□□ -0.13
FAM3B-204ENST00000398652 DUSP23Q9BVJ7 150 aa14.26□□□□□ -0.13
FAM3B-204ENST00000398652 ULBP1Q9BZM6 244 aa14.26□□□□□ -0.13
FAM3B-204ENST00000398652 KBTBD4Q9NVX7 518 aa14.26□□□□□ -0.13
FAM3B-204ENST00000398652 STIM2Q9P246 746 aa14.26□□□□□ -0.13
FAM3B-204ENST00000398652 NBPF19A0A087WUL8 3843 aa14.25□□□□□ -0.13
FAM3B-204ENST00000398652 K7ESM1 405 aa14.25□□□□□ -0.13
FAM3B-204ENST00000398652 SCAMP1O15126 338 aa14.25□□□□□ -0.13
FAM3B-204ENST00000398652 MSI1O43347 362 aaKnown RBP14.25□□□□□ -0.13
FAM3B-204ENST00000398652 PPFIA2O75334 1257 aa14.25□□□□□ -0.13
FAM3B-204ENST00000398652 HLA-DRAP01903 254 aa14.25□□□□□ -0.13
FAM3B-204ENST00000398652 ITGA2BP08514 1039 aa14.25□□□□□ -0.13
FAM3B-204ENST00000398652 CD58P19256 250 aa14.25□□□□□ -0.13
FAM3B-204ENST00000398652 SLC11A2P49281 568 aa14.25□□□□□ -0.13
FAM3B-204ENST00000398652 CDH18Q13634 790 aa14.25□□□□□ -0.13
FAM3B-204ENST00000398652 PITRM1Q5JRX3 1037 aa14.25□□□□□ -0.13
FAM3B-204ENST00000398652 NDRG1Q92597 394 aaKnown RBP14.25□□□□□ -0.13
FAM3B-204ENST00000398652 EDEM1Q92611 657 aa14.25□□□□□ -0.13
FAM3B-204ENST00000398652 PRICKLE1Q96MT3 831 aaPredicted RBP14.25□□□□□ -0.13
FAM3B-204ENST00000398652 BACH2Q9BYV9 841 aa14.25□□□□□ -0.13
FAM3B-204ENST00000398652 IMPG2Q9BZV3 1241 aa14.25□□□□□ -0.13
FAM3B-204ENST00000398652 SLCO3A1Q9UIG8 710 aa14.25□□□□□ -0.13
FAM3B-204ENST00000398652 RELNP78509 3460 aa14.25□□□□□ -0.13
FAM3B-204ENST00000398652 TRPM6Q9BX84 2022 aa14.24□□□□□ -0.13
FAM3B-204ENST00000398652 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.24□□□□□ -0.13
FAM3B-204ENST00000398652 GOLGA6L7A0A1B0GV03 622 aa14.24□□□□□ -0.13
FAM3B-204ENST00000398652 TYW5A2RUC4 315 aaKnown RBP14.24□□□□□ -0.13
FAM3B-204ENST00000398652 CLEC18AA5D8T8 446 aa14.24□□□□□ -0.13
FAM3B-204ENST00000398652 TCEA3O75764 348 aa14.24□□□□□ -0.13
FAM3B-204ENST00000398652 IGLV3-27P01718 113 aa14.24□□□□□ -0.13
FAM3B-204ENST00000398652 CENPBP07199 599 aaPredicted RBP14.24□□□□□ -0.13
FAM3B-204ENST00000398652 METAP1P53582 386 aa14.24□□□□□ -0.13
FAM3B-204ENST00000398652 SLC8A3P57103 927 aa14.24□□□□□ -0.13
FAM3B-204ENST00000398652 ECT2LQ008S8 904 aa14.24□□□□□ -0.13
FAM3B-204ENST00000398652 ZNF177Q13360 481 aaPredicted RBP14.24□□□□□ -0.13
FAM3B-204ENST00000398652 KNOP1Q1ED39 458 aaKnown RBP14.24□□□□□ -0.13
FAM3B-204ENST00000398652 C4orf17Q53FE4 359 aa14.24□□□□□ -0.13
FAM3B-204ENST00000398652 RNF219Q5W0B1 726 aaPredicted RBP14.24□□□□□ -0.13
FAM3B-204ENST00000398652 BSPRYQ5W0U4 402 aa14.24□□□□□ -0.13
FAM3B-204ENST00000398652 NUGGCQ68CJ6 796 aa14.24□□□□□ -0.13
FAM3B-204ENST00000398652 ZCCHC8Q6NZY4 707 aaKnown RBP14.24□□□□□ -0.13
FAM3B-204ENST00000398652 CNNM4Q6P4Q7 775 aa14.24□□□□□ -0.13
FAM3B-204ENST00000398652 CLEC18BQ6UXF7 455 aa14.24□□□□□ -0.13
FAM3B-204ENST00000398652 CLEC18CQ8NCF0 446 aa14.24□□□□□ -0.13
FAM3B-204ENST00000398652 TPCN2Q8NHX9 752 aa14.24□□□□□ -0.13
FAM3B-204ENST00000398652 GOLGA5Q8TBA6 731 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms