RNA–Protein interactions for RNA: ENST00000398541.2

RPS4XP3-201, Transcript of ribosomal protein S4X pseudogene 3, humanhuman

BASIC

Gene RPS4XP3, Length 413 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP3-201ENST00000398541 PTGR2Q8N8N7 351 aaPredicted RBP3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 ANKRD20A12PQ8NF67 263 aa3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 MBD3L2Q8NHZ7 208 aaPredicted RBP3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 SPATA20Q8TB22 786 aa3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 FBXO30Q8TB52 745 aa3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 SETD6Q8TBK2 473 aa3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 ABHD5Q8WTS1 349 aa3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 INTS12Q96CB8 462 aaKnown RBP3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 ZDHHC12Q96GR4 267 aa3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 ZNF668Q96K58 619 aaPredicted RBP3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 WWC2-AS2Q96NR7 200 aa3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 LRRC37BQ96QE4 947 aa3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 LMF1Q96S06 567 aa3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 CDK5RAP1Q96SZ6 601 aaKnown RBP3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 CD180Q99467 661 aa3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 SLX1AQ9BQ83 275 aa3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 SPXQ9BT56 116 aa3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 NDC1Q9BTX1 674 aa3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 TUBB6Q9BUF5 446 aa3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 CARD11Q9BXL7 1154 aa3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 MRPL1Q9BYD6 325 aaKnown RBP3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 KLC2Q9H0B6 622 aa3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 SIK2Q9H0K1 926 aa3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 ST6GALNAC4Q9H4F1 302 aa3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 SEC61A2Q9H9S3 476 aa3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 NRIP3Q9NQ35 241 aa3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 SPATS2LQ9NUQ6 558 aaKnown RBP3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 FBXO34Q9NWN3 711 aa3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 MCM9Q9NXL9 1143 aa3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 ALKBH4Q9NXW9 302 aa3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 DDX43Q9NXZ2 648 aaKnown RBP3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 AKAP7Q9P0M2 348 aaPredicted RBP3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 RABL2AQ9UBK7 228 aaPredicted RBP3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 DNAJB11Q9UBS4 358 aa3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 SLC23A1Q9UHI7 598 aa3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 VPS51Q9UID3 782 aa3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 HOOK1Q9UJC3 728 aaKnown RBP3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 SLC45A2Q9UMX9 530 aa3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 OSGIN2Q9Y236 505 aa3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 DRG1Q9Y295 367 aaKnown RBP3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 ZBTB1Q9Y2K1 713 aa3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 TSC22D4Q9Y3Q8 395 aa3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 ENTPD2Q9Y5L3 495 aa3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 FPGT-TNNI3KV9GXZ4 949 aa3.42□□□□□ -1.86
RPS4XP3-201ENST00000398541 ATAD2BQ9ULI0 1458 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 CCDC187A0A096LP49 1063 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 TCRBV7S2A1N4TA0A589 114 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 TRBC2A0A5B9 178 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 CDRT15L2A8MXV6 281 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 KCNJ18B7U540 433 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 CTDSP2O14595 271 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 SYN3O14994 580 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 LDLRAD4O15165 306 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 PROM1O43490 865 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 HNRNPCL1O60812 293 aaKnown RBP3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 ZNF623O75123 536 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 RASAL1O95294 804 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 CFIP05156 583 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 TPOP07202 933 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 ABCB1P08183 1280 aaPredicted RBP3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 SNRPA1P09661 255 aaKnown RBP3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 C1SP09871 688 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 SUPT20HL2P0C7V6 817 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 CYP2A6P11509 494 aaPredicted RBP3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 COX7A2P14406 83 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 HOXA11P31270 313 aaPredicted RBP3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 MTHFRP42898 656 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 SLC15A1P46059 708 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 CPA2P48052 419 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 PIP4K2AP48426 406 aaPredicted RBP3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 NPY4RP50391 375 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 UFM1P61960 85 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 ZXDAP98168 799 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 AKAP17AQ02040 695 aaKnown RBP3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 SCN1BQ07699 218 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 GOLGA8DPQ0D2H9 430 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 RPA4Q13156 261 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 CBX3Q13185 183 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 MTA1Q13330 715 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 TOP3AQ13472 1001 aaPredicted RBP3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 THOC5Q13769 683 aaKnown RBP3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 PTK6Q13882 451 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 BAATQ14032 418 aaPredicted RBP3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 KCNJ12Q14500 433 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 NAA25Q14CX7 972 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 MGAT5BQ3V5L5 792 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 ZNF568Q3ZCX4 644 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 SUPT20HL1Q3ZLR7 823 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 CRY2Q49AN0 593 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 SLC9B1Q4ZJI4 515 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 LRRC24Q50LG9 513 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 GLRA4Q5JXX5 417 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 CDC73Q6P1J9 531 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 MSANTD2Q6P1R3 559 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 SPRED1Q7Z699 444 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 ZER1Q7Z7L7 766 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 CLEC14AQ86T13 490 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 TUSC5Q8IXB3 177 aa3.41□□□□□ -1.86
RPS4XP3-201ENST00000398541 IL17RCQ8NAC3 791 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms