RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 MOCS2O96007 188 aaPredicted RBP12.43□□□□□ -0.42
TFF3-202ENST00000398431 ITGAVP06756 1048 aa12.43□□□□□ -0.42
TFF3-202ENST00000398431 PTMSP20962 102 aa12.43□□□□□ -0.42
TFF3-202ENST00000398431 C5AR1P21730 350 aa12.43□□□□□ -0.42
TFF3-202ENST00000398431 BMP6P22004 513 aa12.43□□□□□ -0.42
TFF3-202ENST00000398431 RXRGP48443 463 aa12.43□□□□□ -0.42
TFF3-202ENST00000398431 PSMD8P48556 350 aa12.43□□□□□ -0.42
TFF3-202ENST00000398431 ACADVLP49748 655 aa12.43□□□□□ -0.42
TFF3-202ENST00000398431 NUMBP49757 651 aa12.43□□□□□ -0.42
TFF3-202ENST00000398431 NXPH1P58417 271 aa12.43□□□□□ -0.42
TFF3-202ENST00000398431 PPP2CBP62714 309 aa12.43□□□□□ -0.42
TFF3-202ENST00000398431 PPP2CAP67775 309 aa12.43□□□□□ -0.42
TFF3-202ENST00000398431 GCNT1Q02742 428 aa12.43□□□□□ -0.42
TFF3-202ENST00000398431 SFSWAPQ12872 951 aaKnown RBP12.43□□□□□ -0.42
TFF3-202ENST00000398431 TTI2Q6NXR4 508 aa12.43□□□□□ -0.42
TFF3-202ENST00000398431 TMEM110Q86TL2 294 aa12.43□□□□□ -0.42
TFF3-202ENST00000398431 EID2Q8N6I1 236 aa12.43□□□□□ -0.42
TFF3-202ENST00000398431 OR14C36Q8NHC7 312 aa12.43□□□□□ -0.42
TFF3-202ENST00000398431 FRS2Q8WU20 508 aa12.43□□□□□ -0.42
TFF3-202ENST00000398431 SMARCE1Q969G3 411 aa12.43□□□□□ -0.42
TFF3-202ENST00000398431 FAM149B1Q96BN6 582 aa12.43□□□□□ -0.42
TFF3-202ENST00000398431 ALG14Q96F25 216 aa12.43□□□□□ -0.42
TFF3-202ENST00000398431 CCDC34Q96HJ3 373 aa12.43□□□□□ -0.42
TFF3-202ENST00000398431 AASDHPPTQ9NRN7 309 aa12.43□□□□□ -0.42
TFF3-202ENST00000398431 TJP2Q9UDY2 1190 aa12.43□□□□□ -0.42
TFF3-202ENST00000398431 SARDHQ9UL12 918 aa12.43□□□□□ -0.42
TFF3-202ENST00000398431 SHROOM3Q8TF72 1996 aa12.43□□□□□ -0.42
TFF3-202ENST00000398431 LOC400499M0QZD8 3231 aa12.43□□□□□ -0.42
TFF3-202ENST00000398431 TBC1D3DA0A087WVF3 549 aa12.42□□□□□ -0.42
TFF3-202ENST00000398431 TBC1D3IA0A087WXS9 549 aa12.42□□□□□ -0.42
TFF3-202ENST00000398431 TBC1D3EA0A087X179 549 aa12.42□□□□□ -0.42
TFF3-202ENST00000398431 TBC1D3KA0A087X1G2 549 aa12.42□□□□□ -0.42
TFF3-202ENST00000398431 TYW5A2RUC4 315 aaKnown RBP12.42□□□□□ -0.42
TFF3-202ENST00000398431 TBC1D3FA6NER0 549 aaPredicted RBP12.42□□□□□ -0.42
TFF3-202ENST00000398431 KCNU1A8MYU2 1149 aa12.42□□□□□ -0.42
TFF3-202ENST00000398431 TBC1D3LB9A6J9 549 aa12.42□□□□□ -0.42
TFF3-202ENST00000398431 TLX3O43711 291 aaPredicted RBP12.42□□□□□ -0.42
TFF3-202ENST00000398431 SMC2O95347 1197 aa12.42□□□□□ -0.42
TFF3-202ENST00000398431 MOCS3O95396 460 aa12.42□□□□□ -0.42
TFF3-202ENST00000398431 TRUB2O95900 331 aaKnown RBP12.42□□□□□ -0.42
TFF3-202ENST00000398431 C1SP09871 688 aa12.42□□□□□ -0.42
TFF3-202ENST00000398431 TBC1D3HP0C7X1 549 aa12.42□□□□□ -0.42
TFF3-202ENST00000398431 JUPP14923 745 aa12.42□□□□□ -0.42
TFF3-202ENST00000398431 ITPKBP27987 946 aa12.42□□□□□ -0.42
TFF3-202ENST00000398431 EPHA8P29322 1005 aaPredicted RBP12.42□□□□□ -0.42
TFF3-202ENST00000398431 TARDBPQ13148 414 aaKnown RBP eCLIP12.42□□□□□ -0.42
TFF3-202ENST00000398431 TAF5Q15542 800 aa12.42□□□□□ -0.42
TFF3-202ENST00000398431 INAVAQ3KP66 663 aa12.42□□□□□ -0.42
TFF3-202ENST00000398431 SFMBT2Q5VUG0 894 aa12.42□□□□□ -0.42
TFF3-202ENST00000398431 TBC1D3GQ6DHY5 549 aa12.42□□□□□ -0.42
TFF3-202ENST00000398431 TBC1D3CQ6IPX1 549 aa12.42□□□□□ -0.42
TFF3-202ENST00000398431 FBXL19Q6PCT2 694 aa12.42□□□□□ -0.42
TFF3-202ENST00000398431 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.42□□□□□ -0.42
TFF3-202ENST00000398431 TRIM59Q8IWR1 403 aa12.42□□□□□ -0.42
TFF3-202ENST00000398431 TBC1D3Q8IZP1 549 aaPredicted RBP12.42□□□□□ -0.42
TFF3-202ENST00000398431 WDTC1Q8N5D0 677 aa12.42□□□□□ -0.42
TFF3-202ENST00000398431 OR52K2Q8NGK3 314 aa12.42□□□□□ -0.42
TFF3-202ENST00000398431 ZNF606Q8WXB4 792 aa12.42□□□□□ -0.42
TFF3-202ENST00000398431 SKA1Q96BD8 255 aa12.42□□□□□ -0.42
TFF3-202ENST00000398431 SERAC1Q96JX3 654 aa12.42□□□□□ -0.42
TFF3-202ENST00000398431 TIGD1Q96MW7 591 aa12.42□□□□□ -0.42
TFF3-202ENST00000398431 ERVMER34-1Q9H9K5 563 aa12.42□□□□□ -0.42
TFF3-202ENST00000398431 ACP6Q9NPH0 428 aa12.42□□□□□ -0.42
TFF3-202ENST00000398431 GDF3Q9NR23 364 aa12.42□□□□□ -0.42
TFF3-202ENST00000398431 ST7Q9NRC1 585 aa12.42□□□□□ -0.42
TFF3-202ENST00000398431 MAN1B1Q9UKM7 699 aa12.42□□□□□ -0.42
TFF3-202ENST00000398431 NYNRINQ9P2P1 1898 aaKnown RBP12.42□□□□□ -0.42
TFF3-202ENST00000398431 E5RJQ4 531 aa12.41□□□□□ -0.42
TFF3-202ENST00000398431 PSMA7O14818 248 aa12.41□□□□□ -0.42
TFF3-202ENST00000398431 SART1O43290 800 aaKnown RBP12.41□□□□□ -0.42
TFF3-202ENST00000398431 RTN2O75298 545 aa12.41□□□□□ -0.42
TFF3-202ENST00000398431 RFPL3O75679 317 aa12.41□□□□□ -0.42
TFF3-202ENST00000398431 ADH1BP00325 375 aa12.41□□□□□ -0.42
TFF3-202ENST00000398431 IL1BP01584 269 aa12.41□□□□□ -0.42
TFF3-202ENST00000398431 PDGFRAP16234 1089 aa12.41□□□□□ -0.42
TFF3-202ENST00000398431 ABCB4P21439 1286 aa12.41□□□□□ -0.42
TFF3-202ENST00000398431 ACADSBP45954 432 aa12.41□□□□□ -0.42
TFF3-202ENST00000398431 VASPP50552 380 aaPredicted RBP12.41□□□□□ -0.42
TFF3-202ENST00000398431 YWHAZP63104 245 aaKnown RBP12.41□□□□□ -0.42
TFF3-202ENST00000398431 KCNH2Q12809 1159 aa12.41□□□□□ -0.42
TFF3-202ENST00000398431 SLC12A1Q13621 1099 aa12.41□□□□□ -0.42
TFF3-202ENST00000398431 ELAVL3Q14576 367 aaKnown RBP12.41□□□□□ -0.42
TFF3-202ENST00000398431 CCDC40Q4G0X9 1142 aa12.41□□□□□ -0.42
TFF3-202ENST00000398431 CXorf57Q6NSI4 855 aaKnown RBP12.41□□□□□ -0.42
TFF3-202ENST00000398431 CHSY1Q86X52 802 aa12.41□□□□□ -0.42
TFF3-202ENST00000398431 CIR1Q86X95 450 aaPredicted RBP12.41□□□□□ -0.42
TFF3-202ENST00000398431 CCDC117Q8IWD4 279 aaPredicted RBP12.41□□□□□ -0.42
TFF3-202ENST00000398431 CCAR2Q8N163 923 aaKnown RBP12.41□□□□□ -0.42
TFF3-202ENST00000398431 MFSD2AQ8NA29 543 aa12.41□□□□□ -0.42
TFF3-202ENST00000398431 BTN2A3PQ96KV6 586 aa12.41□□□□□ -0.42
TFF3-202ENST00000398431 POPDC2Q9HBU9 364 aa12.41□□□□□ -0.42
TFF3-202ENST00000398431 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.41□□□□□ -0.42
TFF3-202ENST00000398431 PPM1HQ9ULR3 514 aa12.41□□□□□ -0.42
TFF3-202ENST00000398431 CAPN9O14815 690 aa12.4□□□□□ -0.42
TFF3-202ENST00000398431 YKT6O15498 198 aa12.4□□□□□ -0.42
TFF3-202ENST00000398431 ATP9BO43861 1147 aa12.4□□□□□ -0.42
TFF3-202ENST00000398431 APOEP02649 317 aa12.4□□□□□ -0.42
TFF3-202ENST00000398431 CDK4P11802 303 aa12.4□□□□□ -0.42
TFF3-202ENST00000398431 EIF2S3P41091 472 aaKnown RBP12.4□□□□□ -0.42
TFF3-202ENST00000398431 IRAK1P51617 712 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms