RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 CES2O00748 559 aa11.4□□□□□ -0.58
IFT140-202ENST00000397417 STMN1P16949 149 aa11.4□□□□□ -0.58
IFT140-202ENST00000397417 HMOX2P30519 316 aa11.4□□□□□ -0.58
IFT140-202ENST00000397417 PPARGP37231 505 aaPredicted RBP11.4□□□□□ -0.58
IFT140-202ENST00000397417 FDFT1P37268 417 aa11.4□□□□□ -0.58
IFT140-202ENST00000397417 GPD2P43304 727 aa11.4□□□□□ -0.58
IFT140-202ENST00000397417 SOX4Q06945 474 aaPredicted RBP11.4□□□□□ -0.58
IFT140-202ENST00000397417 FUT11Q495W5 492 aa11.4□□□□□ -0.58
IFT140-202ENST00000397417 SLC45A4Q5BKX6 768 aa11.4□□□□□ -0.58
IFT140-202ENST00000397417 C1orf220Q5T0J3 134 aa11.4□□□□□ -0.58
IFT140-202ENST00000397417 DET1Q7L5Y6 550 aa11.4□□□□□ -0.58
IFT140-202ENST00000397417 PLD5Q8N7P1 536 aa11.4□□□□□ -0.58
IFT140-202ENST00000397417 SNX27Q96L92 541 aa11.4□□□□□ -0.58
IFT140-202ENST00000397417 TMEM209Q96SK2 561 aa11.4□□□□□ -0.58
IFT140-202ENST00000397417 KLC4Q9NSK0 619 aa11.4□□□□□ -0.58
IFT140-202ENST00000397417 DDX20Q9UHI6 824 aaKnown RBP11.4□□□□□ -0.58
IFT140-202ENST00000397417 CDH9Q9ULB4 789 aa11.4□□□□□ -0.58
IFT140-202ENST00000397417 CCT8L1PA6NM43 557 aa11.39□□□□□ -0.59
IFT140-202ENST00000397417 LRIG2O94898 1065 aa11.39□□□□□ -0.59
IFT140-202ENST00000397417 CCNB1P14635 433 aa11.39□□□□□ -0.59
IFT140-202ENST00000397417 GEMP55040 296 aa11.39□□□□□ -0.59
IFT140-202ENST00000397417 PTK6Q13882 451 aa11.39□□□□□ -0.59
IFT140-202ENST00000397417 FAM83EQ2M2I3 478 aa11.39□□□□□ -0.59
IFT140-202ENST00000397417 EXOC3L1Q86VI1 746 aa11.39□□□□□ -0.59
IFT140-202ENST00000397417 ALLCQ8N6M5 410 aa11.39□□□□□ -0.59
IFT140-202ENST00000397417 MFSD3Q96ES6 412 aa11.39□□□□□ -0.59
IFT140-202ENST00000397417 AAASQ9NRG9 546 aa11.39□□□□□ -0.59
IFT140-202ENST00000397417 GRIN2DO15399 1336 aa11.39□□□□□ -0.59
IFT140-202ENST00000397417 MEI4A8MW99 385 aa11.39□□□□□ -0.59
IFT140-202ENST00000397417 SEC24DO94855 1032 aaPredicted RBP11.39□□□□□ -0.59
IFT140-202ENST00000397417 CHRNA4P43681 627 aa11.39□□□□□ -0.59
IFT140-202ENST00000397417 UGP2Q16851 508 aa11.39□□□□□ -0.59
IFT140-202ENST00000397417 RASIP1Q5U651 963 aa11.39□□□□□ -0.59
IFT140-202ENST00000397417 DNAJC14Q6Y2X3 702 aaPredicted RBP11.39□□□□□ -0.59
IFT140-202ENST00000397417 ZNF280BQ86YH2 543 aa11.39□□□□□ -0.59
IFT140-202ENST00000397417 DQX1Q8TE96 717 aaKnown RBP11.39□□□□□ -0.59
IFT140-202ENST00000397417 CRYGNQ8WXF5 182 aa11.39□□□□□ -0.59
IFT140-202ENST00000397417 LRRC4CQ9HCJ2 640 aa11.39□□□□□ -0.59
IFT140-202ENST00000397417 FLRT1Q9NZU1 646 aa11.39□□□□□ -0.59
IFT140-202ENST00000397417 CHKBQ9Y259 395 aa11.39□□□□□ -0.59
IFT140-202ENST00000397417 ARID1BQ8NFD5 2236 aaPredicted RBP11.39□□□□□ -0.59
IFT140-202ENST00000397417 CKBP12277 381 aa11.39□□□□□ -0.59
IFT140-202ENST00000397417 FMO4P31512 558 aa11.39□□□□□ -0.59
IFT140-202ENST00000397417 CDKN2BP42772 138 aa11.39□□□□□ -0.59
IFT140-202ENST00000397417 PPP3CCP48454 512 aa11.39□□□□□ -0.59
IFT140-202ENST00000397417 NAGLUP54802 743 aa11.39□□□□□ -0.59
IFT140-202ENST00000397417 VARS2Q5ST30 1063 aaKnown RBP11.39□□□□□ -0.59
IFT140-202ENST00000397417 NT5DC4Q86YG4 428 aa11.39□□□□□ -0.59
IFT140-202ENST00000397417 TUBGCP3Q96CW5 907 aa11.39□□□□□ -0.59
IFT140-202ENST00000397417 MYCBPQ99417 103 aaPredicted RBP11.39□□□□□ -0.59
IFT140-202ENST00000397417 CAPN10Q9HC96 672 aa11.39□□□□□ -0.59
IFT140-202ENST00000397417 ABCC13Q9NSE7 274 aa11.39□□□□□ -0.59
IFT140-202ENST00000397417 DNAJB4Q9UDY4 337 aa11.39□□□□□ -0.59
IFT140-202ENST00000397417 ACOT9Q9Y305 439 aa11.39□□□□□ -0.59
IFT140-202ENST00000397417 PTCH2Q9Y6C5 1203 aa11.39□□□□□ -0.59
IFT140-202ENST00000397417 TRIOBPQ9H2D6 2365 aa11.39□□□□□ -0.59
IFT140-202ENST00000397417 CHUKO15111 745 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 LZTS3O60299 673 aaPredicted RBP11.38□□□□□ -0.59
IFT140-202ENST00000397417 EEF1B2P24534 225 aaKnown RBP11.38□□□□□ -0.59
IFT140-202ENST00000397417 PGGT1BP53609 377 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 PURAQ00577 322 aaKnown RBP11.38□□□□□ -0.59
IFT140-202ENST00000397417 SYTL3Q4VX76 610 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 RASAL3Q86YV0 1011 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 ZNF558Q96NG5 402 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 LRRC19Q9H756 370 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 CHRAC1Q9NRG0 131 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 MRPL17Q9NRX2 175 aaKnown RBP11.38□□□□□ -0.59
IFT140-202ENST00000397417 AAR2Q9Y312 384 aaKnown RBP11.38□□□□□ -0.59
IFT140-202ENST00000397417 COQ4Q9Y3A0 265 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 PCDHB9Q9Y5E1 797 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 COL16A1Q07092 1604 aaPredicted RBP11.38□□□□□ -0.59
IFT140-202ENST00000397417 CCDC88AQ3V6T2 1871 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 TCRBV7S3A2A0A539 114 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 TCRBV9S1A1TA0A576 114 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 RALBP11234 206 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 MMP13P45452 471 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 SERPINB4P48594 390 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 RENBPP51606 427 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 MGAT5Q09328 741 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 CDH17Q12864 832 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 FNBP1LQ5T0N5 605 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 DOK6Q6PKX4 331 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 TAC4Q86UU9 113 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 TMEM86AQ8N2M4 240 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 PNPLA1Q8N8W4 532 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 OR7D4Q8NG98 312 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 OR52K2Q8NGK3 314 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 PCDH19Q8TAB3 1148 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 KCTD15Q96SI1 283 aaPredicted RBP11.38□□□□□ -0.59
IFT140-202ENST00000397417 CXCL16Q9H2A7 254 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 VCXQ9H320 206 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 SYBUQ9NX95 663 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 SLC17A7Q9P2U7 560 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 L3MBTL1Q9Y468 752 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 SMCHD1A6NHR9 2005 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 A0A0A0MRY4 1105 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 C2orf81A6NN90 581 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 NRP1O14786 923 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 MTSS1O43312 755 aa11.38□□□□□ -0.59
IFT140-202ENST00000397417 HOXA2O43364 376 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms