RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 FAF2Q96CS3 445 aa15.34■□□□□ 0.05
CAPN3-207ENST00000397200 CNOT10Q9H9A5 744 aaKnown RBP15.34■□□□□ 0.05
CAPN3-207ENST00000397200 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.34■□□□□ 0.05
CAPN3-207ENST00000397200 TDP1Q9NUW8 608 aa15.34■□□□□ 0.05
CAPN3-207ENST00000397200 ARHGEF38Q9NXL2 777 aa15.34■□□□□ 0.05
CAPN3-207ENST00000397200 CDH7Q9ULB5 785 aa15.34■□□□□ 0.05
CAPN3-207ENST00000397200 TPX2Q9ULW0 747 aaKnown RBP15.34■□□□□ 0.05
CAPN3-207ENST00000397200 KCNU1A8MYU2 1149 aa15.33■□□□□ 0.04
CAPN3-207ENST00000397200 ZSCAN5DPP0CG00 497 aa15.33■□□□□ 0.04
CAPN3-207ENST00000397200 WEE1P30291 646 aa15.33■□□□□ 0.04
CAPN3-207ENST00000397200 GBP2P32456 591 aaPredicted RBP15.33■□□□□ 0.04
CAPN3-207ENST00000397200 ADRA1BP35368 520 aa15.33■□□□□ 0.04
CAPN3-207ENST00000397200 MTA1Q13330 715 aa15.33■□□□□ 0.04
CAPN3-207ENST00000397200 TFDP2Q14188 446 aa15.33■□□□□ 0.04
CAPN3-207ENST00000397200 EFHC2Q5JST6 749 aa15.33■□□□□ 0.04
CAPN3-207ENST00000397200 POTEHQ6S545 545 aa15.33■□□□□ 0.04
CAPN3-207ENST00000397200 PRUNE1Q86TP1 453 aa15.33■□□□□ 0.04
CAPN3-207ENST00000397200 ARID3BQ8IVW6 561 aaPredicted RBP15.33■□□□□ 0.04
CAPN3-207ENST00000397200 EPS8L3Q8TE67 593 aaKnown RBP15.33■□□□□ 0.04
CAPN3-207ENST00000397200 HSPH1Q92598 858 aa15.33■□□□□ 0.04
CAPN3-207ENST00000397200 USP13Q92995 863 aaPredicted RBP15.33■□□□□ 0.04
CAPN3-207ENST00000397200 SERPINB12Q96P63 405 aa15.33■□□□□ 0.04
CAPN3-207ENST00000397200 TMEM121Q9BTD3 319 aa15.33■□□□□ 0.04
CAPN3-207ENST00000397200 SNRNP25Q9BV90 132 aaKnown RBP15.33■□□□□ 0.04
CAPN3-207ENST00000397200 STMN4Q9H169 189 aaPredicted RBP15.33■□□□□ 0.04
CAPN3-207ENST00000397200 CFAP97Q9P2B7 532 aa15.33■□□□□ 0.04
CAPN3-207ENST00000397200 LSM7Q9UK45 103 aaKnown RBP15.33■□□□□ 0.04
CAPN3-207ENST00000397200 FZD10Q9ULW2 581 aa15.33■□□□□ 0.04
CAPN3-207ENST00000397200 AP4E1Q9UPM8 1137 aa15.33■□□□□ 0.04
CAPN3-207ENST00000397200 SH3BP1Q9Y3L3 701 aa15.33■□□□□ 0.04
CAPN3-207ENST00000397200 DOCK8Q8NF50 2099 aa15.33■□□□□ 0.04
CAPN3-207ENST00000397200 GRXCR2A6NFK2 248 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 LEFTY2O00292 366 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 RASGRF2O14827 1237 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 RGS16O15492 202 aaPredicted RBP15.32■□□□□ 0.04
CAPN3-207ENST00000397200 MBTPS2O43462 519 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 PRAMEF12O95522 483 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 ETS1P14921 441 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 PECAM1P16284 738 aaPredicted RBP15.32■□□□□ 0.04
CAPN3-207ENST00000397200 CORO1AP31146 461 aaKnown RBP15.32■□□□□ 0.04
CAPN3-207ENST00000397200 HPDP32754 393 aaPredicted RBP15.32■□□□□ 0.04
CAPN3-207ENST00000397200 MMP13P45452 471 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 CDH6P55285 790 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 ZXDBP98169 803 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 GUCY1A3Q02108 690 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 SCAPQ12770 1279 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 GPS1Q13098 491 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 CBLBQ13191 982 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 AUHQ13825 339 aaKnown RBP15.32■□□□□ 0.04
CAPN3-207ENST00000397200 PCGF5Q86SE9 256 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 RFX6Q8HWS3 928 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 PSTKQ8IV42 348 aaKnown RBP15.32■□□□□ 0.04
CAPN3-207ENST00000397200 SH3RF2Q8TEC5 729 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 PRCCQ92733 491 aaPredicted RBP15.32■□□□□ 0.04
CAPN3-207ENST00000397200 CENPTQ96BT3 561 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 BTN2A3PQ96KV6 586 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 RNF157Q96PX1 679 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 ZNF670Q9BS34 389 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 KIF9Q9HAQ2 790 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 ANLNQ9NQW6 1124 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 TMPRSS4Q9NRS4 437 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 EURLQ9NYK6 297 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 BCCIPQ9P287 314 aaKnown RBP eCLIP15.32■□□□□ 0.04
CAPN3-207ENST00000397200 CCL26Q9Y258 94 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 ZFP37Q9Y6Q3 630 aaPredicted RBP15.32■□□□□ 0.04
CAPN3-207ENST00000397200 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.32■□□□□ 0.04
CAPN3-207ENST00000397200 SGK1O00141 431 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 SMAPO00193 183 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 PAGE1O75459 146 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 IL4RP24394 825 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 DYNLT1P63172 113 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 FAM78AQ5JUQ0 283 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 SLC9A4Q6AI14 798 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 DENND1CQ8IV53 801 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 CELF5Q8N6W0 485 aaKnown RBP15.32■□□□□ 0.04
CAPN3-207ENST00000397200 MAFAQ8NHW3 353 aaPredicted RBP15.32■□□□□ 0.04
CAPN3-207ENST00000397200 ADAMTS19Q8TE59 1207 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 SMARCD2Q92925 531 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 PWWP2AQ96N64 755 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 ASB16Q96NS5 453 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 HAPLN3Q96S86 360 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 MYADMQ96S97 322 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 ZMYND15Q9H091 742 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 EPN3Q9H201 632 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 DHX35Q9H5Z1 703 aaKnown RBP15.32■□□□□ 0.04
CAPN3-207ENST00000397200 PCDH18Q9HCL0 1135 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 GPATCH2LQ9NWQ4 482 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 CWC15Q9P013 229 aaKnown RBP15.32■□□□□ 0.04
CAPN3-207ENST00000397200 LGALS13Q9UHV8 139 aa15.32■□□□□ 0.04
CAPN3-207ENST00000397200 I6L893 689 aaPredicted RBP15.31■□□□□ 0.04
CAPN3-207ENST00000397200 MCF2LO15068 1137 aa15.31■□□□□ 0.04
CAPN3-207ENST00000397200 ACSL3O95573 720 aa15.31■□□□□ 0.04
CAPN3-207ENST00000397200 TCF3P15923 654 aa15.31■□□□□ 0.04
CAPN3-207ENST00000397200 TGM2P21980 687 aa15.31■□□□□ 0.04
CAPN3-207ENST00000397200 MAGEA4P43358 317 aa15.31■□□□□ 0.04
CAPN3-207ENST00000397200 SLC11A2P49281 568 aa15.31■□□□□ 0.04
CAPN3-207ENST00000397200 GDF10P55107 478 aa15.31■□□□□ 0.04
CAPN3-207ENST00000397200 EIF3EP60228 445 aaKnown RBP15.31■□□□□ 0.04
CAPN3-207ENST00000397200 MMRN1Q13201 1228 aa15.31■□□□□ 0.04
CAPN3-207ENST00000397200 KRT81Q14533 505 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms