RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 PCDHGC3Q9UN70 934 aa14.18□□□□□ -0.14
SEC13-205ENST00000397101 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.18□□□□□ -0.14
SEC13-205ENST00000397101 BTBD3Q9Y2F9 522 aa14.18□□□□□ -0.14
SEC13-205ENST00000397101 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.18□□□□□ -0.14
SEC13-205ENST00000397101 GOLGA4Q13439 2230 aaKnown RBP14.18□□□□□ -0.14
SEC13-205ENST00000397101 KNTC1P50748 2209 aa14.17□□□□□ -0.14
SEC13-205ENST00000397101 A0A087X0T9 212 aa14.17□□□□□ -0.14
SEC13-205ENST00000397101 DDX3XO00571 662 aaKnown RBP eCLIP14.17□□□□□ -0.145e-9■■■□□ 15.5
SEC13-205ENST00000397101 TIMM44O43615 452 aa14.17□□□□□ -0.14
SEC13-205ENST00000397101 DFNA5O60443 496 aa14.17□□□□□ -0.14
SEC13-205ENST00000397101 C1QL1O75973 258 aa14.17□□□□□ -0.14
SEC13-205ENST00000397101 BEST1O76090 585 aa14.17□□□□□ -0.14
SEC13-205ENST00000397101 NDUFA10O95299 355 aa14.17□□□□□ -0.14
SEC13-205ENST00000397101 FAM228BP0C875 321 aa14.17□□□□□ -0.14
SEC13-205ENST00000397101 MAGEA1P43355 309 aa14.17□□□□□ -0.14
SEC13-205ENST00000397101 NSFP46459 744 aaKnown RBP14.17□□□□□ -0.14
SEC13-205ENST00000397101 BCAT1P54687 386 aa14.17□□□□□ -0.14
SEC13-205ENST00000397101 KRT83P78385 493 aa14.17□□□□□ -0.14
SEC13-205ENST00000397101 SLC18A3Q16572 532 aa14.17□□□□□ -0.14
SEC13-205ENST00000397101 GEN1Q17RS7 908 aa14.17□□□□□ -0.14
SEC13-205ENST00000397101 CLEC16AQ2KHT3 1053 aa14.17□□□□□ -0.14
SEC13-205ENST00000397101 ALKBH5Q6P6C2 394 aaKnown RBP14.17□□□□□ -0.14
SEC13-205ENST00000397101 ANKS1BQ7Z6G8 1248 aa14.17□□□□□ -0.14
SEC13-205ENST00000397101 KIAA1328Q86T90 577 aa14.17□□□□□ -0.14
SEC13-205ENST00000397101 ANKRD52Q8NB46 1076 aa14.17□□□□□ -0.14
SEC13-205ENST00000397101 MSANTD4Q8NCY6 345 aa14.17□□□□□ -0.14
SEC13-205ENST00000397101 C1orf131Q8NDD1 294 aaKnown RBP14.17□□□□□ -0.14
SEC13-205ENST00000397101 CPA5Q8WXQ8 436 aa14.17□□□□□ -0.14
SEC13-205ENST00000397101 NXPE2Q96DL1 559 aa14.17□□□□□ -0.14
SEC13-205ENST00000397101 ERLEC1Q96DZ1 483 aa14.17□□□□□ -0.14
SEC13-205ENST00000397101 P2RY11Q96G91 374 aa14.17□□□□□ -0.14
SEC13-205ENST00000397101 CRELD1Q96HD1 420 aa14.17□□□□□ -0.14
SEC13-205ENST00000397101 PIWIL1Q96J94 861 aaKnown RBP14.17□□□□□ -0.14
SEC13-205ENST00000397101 CDK5RAP1Q96SZ6 601 aaKnown RBP14.17□□□□□ -0.14
SEC13-205ENST00000397101 PCDHB18PQ96TA0 734 aa14.17□□□□□ -0.14
SEC13-205ENST00000397101 ZSWIM1Q9BR11 485 aa14.17□□□□□ -0.14
SEC13-205ENST00000397101 SLC2A11Q9BYW1 496 aa14.17□□□□□ -0.14
SEC13-205ENST00000397101 ST7Q9NRC1 585 aa14.17□□□□□ -0.14
SEC13-205ENST00000397101 OSER1Q9NX31 292 aa14.17□□□□□ -0.14
SEC13-205ENST00000397101 ELOVL2Q9NXB9 296 aa14.17□□□□□ -0.14
SEC13-205ENST00000397101 ANKRD6Q9Y2G4 727 aa14.17□□□□□ -0.14
SEC13-205ENST00000397101 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.17□□□□□ -0.14
SEC13-205ENST00000397101 CKAP5Q14008 2032 aa14.16□□□□□ -0.14
SEC13-205ENST00000397101 EIF3CLB5ME19 914 aaKnown RBP14.16□□□□□ -0.14
SEC13-205ENST00000397101 STC2O76061 302 aa14.16□□□□□ -0.14
SEC13-205ENST00000397101 ZIC2O95409 532 aaPredicted RBP14.16□□□□□ -0.14
SEC13-205ENST00000397101 LSM8O95777 96 aaKnown RBP14.16□□□□□ -0.14
SEC13-205ENST00000397101 C1SP09871 688 aa14.16□□□□□ -0.14
SEC13-205ENST00000397101 RARGP13631 454 aa14.16□□□□□ -0.14
SEC13-205ENST00000397101 EIF2S3P41091 472 aaKnown RBP14.16□□□□□ -0.14
SEC13-205ENST00000397101 CSNK1EP49674 416 aaKnown RBP14.16□□□□□ -0.14
SEC13-205ENST00000397101 MAP3K7CLP57077 242 aa14.16□□□□□ -0.14
SEC13-205ENST00000397101 COG7P83436 770 aa14.16□□□□□ -0.14
SEC13-205ENST00000397101 PDE4CQ08493 712 aa14.16□□□□□ -0.14
SEC13-205ENST00000397101 BST2Q10589 180 aaKnown RBP14.16□□□□□ -0.14
SEC13-205ENST00000397101 ZNF234Q14588 700 aa14.16□□□□□ -0.14
SEC13-205ENST00000397101 ACAD10Q6JQN1 1059 aa14.16□□□□□ -0.14
SEC13-205ENST00000397101 PPP1R2P3Q6NXS1 205 aa14.16□□□□□ -0.14
SEC13-205ENST00000397101 ERICH1Q86X53 443 aa14.16□□□□□ -0.14
SEC13-205ENST00000397101 TXLNBQ8N3L3 684 aa14.16□□□□□ -0.14
SEC13-205ENST00000397101 CPXM2Q8N436 756 aa14.16□□□□□ -0.14
SEC13-205ENST00000397101 OR2T3Q8NH03 318 aa14.16□□□□□ -0.14
SEC13-205ENST00000397101 SLC30A5Q8TAD4 765 aa14.16□□□□□ -0.14
SEC13-205ENST00000397101 EIF3CQ99613 913 aaKnown RBP14.16□□□□□ -0.14
SEC13-205ENST00000397101 DESI2Q9BSY9 194 aa14.16□□□□□ -0.14
SEC13-205ENST00000397101 DCLK3Q9C098 648 aa14.16□□□□□ -0.14
SEC13-205ENST00000397101 LHX5Q9H2C1 402 aa14.16□□□□□ -0.14
SEC13-205ENST00000397101 FBRSQ9HAH7 460 aa14.16□□□□□ -0.14
SEC13-205ENST00000397101 PLK2Q9NYY3 685 aa14.16□□□□□ -0.14
SEC13-205ENST00000397101 CLIC5Q9NZA1 410 aa14.16□□□□□ -0.14
SEC13-205ENST00000397101 SNX11Q9Y5W9 270 aa14.16□□□□□ -0.14
SEC13-205ENST00000397101 FAM149AA5PLN7 773 aa14.15□□□□□ -0.14
SEC13-205ENST00000397101 CAPN8A6NHC0 703 aa14.15□□□□□ -0.14
SEC13-205ENST00000397101 HHLA1C9JL84 531 aa14.15□□□□□ -0.14
SEC13-205ENST00000397101 RTN2O75298 545 aa14.15□□□□□ -0.14
SEC13-205ENST00000397101 FTLP02792 175 aaPredicted RBP14.15□□□□□ -0.14
SEC13-205ENST00000397101 SETSIPP0DME0 302 aa14.15□□□□□ -0.14
SEC13-205ENST00000397101 RGS7P49802 495 aa14.15□□□□□ -0.14
SEC13-205ENST00000397101 SNX16P57768 344 aa14.15□□□□□ -0.14
SEC13-205ENST00000397101 ZBTB16Q05516 673 aa14.15□□□□□ -0.14
SEC13-205ENST00000397101 CAMK2GQ13555 558 aaPredicted RBP14.15□□□□□ -0.14
SEC13-205ENST00000397101 ASTE1Q2TB18 679 aaPredicted RBP14.15□□□□□ -0.14
SEC13-205ENST00000397101 HS1BP3Q53T59 392 aa14.15□□□□□ -0.14
SEC13-205ENST00000397101 C6orf118Q5T5N4 469 aa14.15□□□□□ -0.14
SEC13-205ENST00000397101 DHRS13Q6UX07 377 aa14.15□□□□□ -0.14
SEC13-205ENST00000397101 LRRC69Q6ZNQ3 347 aa14.15□□□□□ -0.14
SEC13-205ENST00000397101 CLEC20AQ6ZU45 233 aa14.15□□□□□ -0.14
SEC13-205ENST00000397101 MARCH9Q86YJ5 346 aa14.15□□□□□ -0.14
SEC13-205ENST00000397101 ACRBPQ8NEB7 543 aa14.15□□□□□ -0.14
SEC13-205ENST00000397101 DUSP16Q9BY84 665 aa14.15□□□□□ -0.14
SEC13-205ENST00000397101 NMUR1Q9HB89 426 aa14.15□□□□□ -0.14
SEC13-205ENST00000397101 TM9SF3Q9HD45 589 aa14.15□□□□□ -0.14
SEC13-205ENST00000397101 NAGPAQ9UK23 515 aa14.15□□□□□ -0.14
SEC13-205ENST00000397101 PCDHA13Q9Y5I0 950 aa14.15□□□□□ -0.14
SEC13-205ENST00000397101 KNL1Q8NG31 2342 aa14.15□□□□□ -0.14
SEC13-205ENST00000397101 COL5A1P20908 1838 aaPredicted RBP14.14□□□□□ -0.15
SEC13-205ENST00000397101 A0A1W2PQH9 124 aa14.14□□□□□ -0.15
SEC13-205ENST00000397101 GOLGA8CPA6NN73 597 aa14.14□□□□□ -0.15
SEC13-205ENST00000397101 TSPAN3O60637 253 aa14.14□□□□□ -0.15
SEC13-205ENST00000397101 KLKB1P03952 638 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms