RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 PIGGQ5H8A4 983 aa14.25□□□□□ -0.13
NUP98-204ENST00000397004 C6orf52Q5T4I8 152 aa14.25□□□□□ -0.13
NUP98-204ENST00000397004 CERS2Q96G23 380 aa14.25□□□□□ -0.13
NUP98-204ENST00000397004 HEMK1Q9Y5R4 338 aaPredicted RBP14.25□□□□□ -0.13
NUP98-204ENST00000397004 FAM72CH0Y354 149 aa14.25□□□□□ -0.13
NUP98-204ENST00000397004 NEMP1O14524 444 aa14.25□□□□□ -0.13
NUP98-204ENST00000397004 CITO14578 2027 aa14.25□□□□□ -0.13
NUP98-204ENST00000397004 PGAM1P18669 254 aa14.25□□□□□ -0.13
NUP98-204ENST00000397004 IGFBP6P24592 240 aaPredicted RBP14.25□□□□□ -0.13
NUP98-204ENST00000397004 FAM72AQ5TYM5 149 aa14.25□□□□□ -0.13
NUP98-204ENST00000397004 FAM72DQ6L9T8 149 aa14.25□□□□□ -0.13
NUP98-204ENST00000397004 FAM72BQ86X60 149 aa14.25□□□□□ -0.13
NUP98-204ENST00000397004 DSELQ8IZU8 1212 aa14.25□□□□□ -0.13
NUP98-204ENST00000397004 USP13Q92995 863 aaPredicted RBP14.25□□□□□ -0.13
NUP98-204ENST00000397004 PKP2Q99959 881 aa14.25□□□□□ -0.13
NUP98-204ENST00000397004 RPS6KL1Q9Y6S9 549 aa14.25□□□□□ -0.13
NUP98-204ENST00000397004 TK2O00142 265 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 ASLP04424 464 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 GRK2P25098 689 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 RABGGTBP53611 331 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 LSM12Q3MHD2 195 aaKnown RBP14.24□□□□□ -0.13
NUP98-204ENST00000397004 KLHDC10Q6PID8 442 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 SNX32Q86XE0 403 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 CHST13Q8NET6 341 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 C18orf25Q96B23 403 aaPredicted RBP14.24□□□□□ -0.13
NUP98-204ENST00000397004 MPP4Q96JB8 637 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 RTKNQ9BST9 563 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 PREBQ9HCU5 417 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 TUBGCP4Q9UGJ1 667 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 APPL1Q9UKG1 709 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 LZTS1Q9Y250 596 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 C19orf81C9J6K1 198 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 LCP1P13796 627 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 PIK3R1P27986 724 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 NUDT2P50583 147 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 LSMEM2Q8N112 164 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 JADE3Q92613 823 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 CDRT15Q96T59 188 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 RBBP8Q99708 897 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 AS3MTQ9HBK9 375 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 STK39Q9UEW8 545 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 ZDHHC2Q9UIJ5 367 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 DTNAQ9Y4J8 743 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 ZNF487B1APH4 448 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 MLNP12872 115 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 PTPN1P18031 435 aaKnown RBP14.24□□□□□ -0.13
NUP98-204ENST00000397004 PTPN9P43378 593 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 PLPPR4Q7Z2D5 763 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 ARHGAP18Q8N392 663 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 LINC01465Q8N7H1 131 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 OPTNQ96CV9 577 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 SPATA33Q96N06 139 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 AGAP3Q96P47 875 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 COPS7BQ9H9Q2 264 aaPredicted RBP14.24□□□□□ -0.13
NUP98-204ENST00000397004 TXNRD2Q9NNW7 524 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 ARHGAP26Q9UNA1 814 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 PSMD13Q9UNM6 376 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 PHF24Q9UPV7 400 aa14.24□□□□□ -0.13
NUP98-204ENST00000397004 CAPNS1P04632 268 aa14.23□□□□□ -0.13
NUP98-204ENST00000397004 NR2C2P49116 596 aa14.23□□□□□ -0.13
NUP98-204ENST00000397004 NSUN2Q08J23 767 aaKnown RBP eCLIP14.23□□□□□ -0.13
NUP98-204ENST00000397004 INSCQ1MX18 579 aa14.23□□□□□ -0.13
NUP98-204ENST00000397004 ZNF512Q96ME7 567 aaPredicted RBP14.23□□□□□ -0.13
NUP98-204ENST00000397004 C1QTNF1Q9BXJ1 281 aa14.23□□□□□ -0.13
NUP98-204ENST00000397004 PRDM12Q9H4Q4 367 aa14.23□□□□□ -0.13
NUP98-204ENST00000397004 SEPT10Q9P0V9 454 aa14.23□□□□□ -0.13
NUP98-204ENST00000397004 PLXNA1Q9UIW2 1896 aa14.23□□□□□ -0.13
NUP98-204ENST00000397004 TMEM233B4DJY2 109 aa14.23□□□□□ -0.13
NUP98-204ENST00000397004 FZD9O00144 591 aa14.23□□□□□ -0.13
NUP98-204ENST00000397004 MATN2O00339 956 aa14.23□□□□□ -0.13
NUP98-204ENST00000397004 CNMDO75829 334 aa14.23□□□□□ -0.13
NUP98-204ENST00000397004 TGFB3P10600 412 aa14.23□□□□□ -0.13
NUP98-204ENST00000397004 STRA8Q7Z7C7 330 aa14.23□□□□□ -0.13
NUP98-204ENST00000397004 TDRD5Q8NAT2 981 aaKnown RBP14.23□□□□□ -0.13
NUP98-204ENST00000397004 FAM110BQ8TC76 370 aa14.23□□□□□ -0.13
NUP98-204ENST00000397004 RCN3Q96D15 328 aa14.23□□□□□ -0.13
NUP98-204ENST00000397004 BTBD9Q96Q07 612 aa14.23□□□□□ -0.13
NUP98-204ENST00000397004 PHF12Q96QT6 1004 aa14.23□□□□□ -0.13
NUP98-204ENST00000397004 GRIP2Q9C0E4 1043 aa14.23□□□□□ -0.13
NUP98-204ENST00000397004 EPB41L1Q9H4G0 881 aa14.23□□□□□ -0.13
NUP98-204ENST00000397004 ASB7Q9H672 318 aa14.23□□□□□ -0.13
NUP98-204ENST00000397004 SUDS3Q9H7L9 328 aaPredicted RBP14.23□□□□□ -0.13
NUP98-204ENST00000397004 LMCD1Q9NZU5 365 aa14.23□□□□□ -0.13
NUP98-204ENST00000397004 FZD10Q9ULW2 581 aa14.23□□□□□ -0.13
NUP98-204ENST00000397004 C2P06681 752 aa14.23□□□□□ -0.13
NUP98-204ENST00000397004 MYL4P12829 197 aa14.23□□□□□ -0.13
NUP98-204ENST00000397004 ATP6V1B1P15313 513 aa14.23□□□□□ -0.13
NUP98-204ENST00000397004 TKTP29401 623 aaKnown RBP14.23□□□□□ -0.13
NUP98-204ENST00000397004 CERCAMQ5T4B2 595 aa14.23□□□□□ -0.13
NUP98-204ENST00000397004 HMGCLL1Q8TB92 370 aa14.23□□□□□ -0.13
NUP98-204ENST00000397004 NUP205Q92621 2012 aa14.23□□□□□ -0.13
NUP98-204ENST00000397004 C7orf72A4D263 438 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 ACOT8O14734 319 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 BEST1O76090 585 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 PDGFRBP09619 1106 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 MCF2P10911 925 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 GP5P40197 560 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 XIAPP98170 497 aa14.22□□□□□ -0.13
NUP98-204ENST00000397004 DYNC1I2Q13409 638 aaKnown RBP14.22□□□□□ -0.13
NUP98-204ENST00000397004 PDK1Q15118 436 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms