RNA–Protein interactions for RNA: ENST00000396682.6

RPA3-202, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RPA3, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-202ENST00000396682 DNAJC3Q13217 504 aa13.71□□□□□ -0.21
RPA3-202ENST00000396682 STIM1Q13586 685 aa13.71□□□□□ -0.21
RPA3-202ENST00000396682 TAF5Q15542 800 aa13.71□□□□□ -0.21
RPA3-202ENST00000396682 INAVAQ3KP66 663 aa13.71□□□□□ -0.21
RPA3-202ENST00000396682 TMEM110Q86TL2 294 aa13.71□□□□□ -0.21
RPA3-202ENST00000396682 CHSY1Q86X52 802 aa13.71□□□□□ -0.21
RPA3-202ENST00000396682 CIR1Q86X95 450 aaPredicted RBP13.71□□□□□ -0.21
RPA3-202ENST00000396682 PDCD7Q8N8D1 485 aaKnown RBP13.71□□□□□ -0.21
RPA3-202ENST00000396682 STK32AQ8WU08 396 aa13.71□□□□□ -0.21
RPA3-202ENST00000396682 FAM131CQ96AQ9 280 aa13.71□□□□□ -0.21
RPA3-202ENST00000396682 CRELD1Q96HD1 420 aa13.71□□□□□ -0.21
RPA3-202ENST00000396682 LRIG1Q96JA1 1093 aa13.71□□□□□ -0.21
RPA3-202ENST00000396682 AASDHPPTQ9NRN7 309 aa13.71□□□□□ -0.21
RPA3-202ENST00000396682 TJP2Q9UDY2 1190 aa13.71□□□□□ -0.21
RPA3-202ENST00000396682 CEP83Q9Y592 693 aa13.71□□□□□ -0.21
RPA3-202ENST00000396682 GCN1Q92616 2671 aaKnown RBP13.7□□□□□ -0.22
RPA3-202ENST00000396682 DOCK9Q9BZ29 2069 aa13.7□□□□□ -0.22
RPA3-202ENST00000396682 A0A087WV48 116 aa13.7□□□□□ -0.22
RPA3-202ENST00000396682 GOLGA6L4A6NEF3 574 aa13.7□□□□□ -0.22
RPA3-202ENST00000396682 KCNU1A8MYU2 1149 aa13.7□□□□□ -0.22
RPA3-202ENST00000396682 PLK4O00444 970 aa13.7□□□□□ -0.22
RPA3-202ENST00000396682 ENC1O14682 589 aa13.7□□□□□ -0.22
RPA3-202ENST00000396682 CAPN9O14815 690 aa13.7□□□□□ -0.22
RPA3-202ENST00000396682 LATO43561 262 aa13.7□□□□□ -0.22
RPA3-202ENST00000396682 MOCS3O95396 460 aa13.7□□□□□ -0.22
RPA3-202ENST00000396682 ADH1BP00325 375 aa13.7□□□□□ -0.22
RPA3-202ENST00000396682 APOEP02649 317 aa13.7□□□□□ -0.22
RPA3-202ENST00000396682 KRT5P13647 590 aa13.7□□□□□ -0.22
RPA3-202ENST00000396682 ACADSBP45954 432 aa13.7□□□□□ -0.22
RPA3-202ENST00000396682 NXPH1P58417 271 aa13.7□□□□□ -0.22
RPA3-202ENST00000396682 YWHAZP63104 245 aaKnown RBP13.7□□□□□ -0.22
RPA3-202ENST00000396682 ELAVL3Q14576 367 aaKnown RBP13.7□□□□□ -0.22
RPA3-202ENST00000396682 CXorf57Q6NSI4 855 aaKnown RBP13.7□□□□□ -0.22
RPA3-202ENST00000396682 FOXR2Q6PJQ5 311 aa13.7□□□□□ -0.22
RPA3-202ENST00000396682 SND1Q7KZF4 910 aaKnown RBP eCLIP13.7□□□□□ -0.222e-6■■□□□ 13.3
RPA3-202ENST00000396682 TMPRSS12Q86WS5 348 aa13.7□□□□□ -0.22
RPA3-202ENST00000396682 CCDC117Q8IWD4 279 aaPredicted RBP13.7□□□□□ -0.22
RPA3-202ENST00000396682 CCAR2Q8N163 923 aaKnown RBP13.7□□□□□ -0.22
RPA3-202ENST00000396682 OR52K2Q8NGK3 314 aa13.7□□□□□ -0.22
RPA3-202ENST00000396682 OR14C36Q8NHC7 312 aa13.7□□□□□ -0.22
RPA3-202ENST00000396682 FRS2Q8WU20 508 aa13.7□□□□□ -0.22
RPA3-202ENST00000396682 NELFBQ8WX92 580 aa13.7□□□□□ -0.22
RPA3-202ENST00000396682 ZNF606Q8WXB4 792 aa13.7□□□□□ -0.22
RPA3-202ENST00000396682 SERAC1Q96JX3 654 aa13.7□□□□□ -0.22
RPA3-202ENST00000396682 BTN2A3PQ96KV6 586 aa13.7□□□□□ -0.22
RPA3-202ENST00000396682 INTS2Q9H0H0 1204 aaKnown RBP13.7□□□□□ -0.22
RPA3-202ENST00000396682 POPDC2Q9HBU9 364 aa13.7□□□□□ -0.22
RPA3-202ENST00000396682 ARHGAP20Q9P2F6 1191 aa13.7□□□□□ -0.22
RPA3-202ENST00000396682 CTNND2Q9UQB3 1225 aa13.7□□□□□ -0.22
RPA3-202ENST00000396682 PCDHGA1Q9Y5H4 931 aa13.7□□□□□ -0.22
RPA3-202ENST00000396682 F5H5T6 163 aa13.69□□□□□ -0.22
RPA3-202ENST00000396682 LETM1O95202 739 aaPredicted RBP13.69□□□□□ -0.22
RPA3-202ENST00000396682 IL1BP01584 269 aa13.69□□□□□ -0.22
RPA3-202ENST00000396682 ITGAVP06756 1048 aa13.69□□□□□ -0.22
RPA3-202ENST00000396682 PDGFRAP16234 1089 aa13.69□□□□□ -0.22
RPA3-202ENST00000396682 ABCB4P21439 1286 aa13.69□□□□□ -0.22
RPA3-202ENST00000396682 EPHA8P29322 1005 aaPredicted RBP13.69□□□□□ -0.22
RPA3-202ENST00000396682 ACADVLP49748 655 aa13.69□□□□□ -0.22
RPA3-202ENST00000396682 IRAK1P51617 712 aa13.69□□□□□ -0.22
RPA3-202ENST00000396682 MARSP56192 900 aaKnown RBP13.69□□□□□ -0.22
RPA3-202ENST00000396682 PDCLQ13371 301 aa13.69□□□□□ -0.22
RPA3-202ENST00000396682 MORC3Q14149 939 aa13.69□□□□□ -0.22
RPA3-202ENST00000396682 MEA1Q16626 185 aa13.69□□□□□ -0.22
RPA3-202ENST00000396682 RNF219Q5W0B1 726 aaPredicted RBP13.69□□□□□ -0.22
RPA3-202ENST00000396682 KANSL1Q7Z3B3 1105 aa13.69□□□□□ -0.22
RPA3-202ENST00000396682 SPATS2Q86XZ4 545 aaKnown RBP13.69□□□□□ -0.22
RPA3-202ENST00000396682 ELOA2Q8IYF1 753 aaPredicted RBP13.69□□□□□ -0.22
RPA3-202ENST00000396682 EID2Q8N6I1 236 aa13.69□□□□□ -0.22
RPA3-202ENST00000396682 TSC1Q92574 1164 aa13.69□□□□□ -0.22
RPA3-202ENST00000396682 ALG14Q96F25 216 aa13.69□□□□□ -0.22
RPA3-202ENST00000396682 CNDP2Q96KP4 475 aaKnown RBP13.69□□□□□ -0.22
RPA3-202ENST00000396682 TRIM62Q9BVG3 475 aa13.69□□□□□ -0.22
RPA3-202ENST00000396682 THAP9Q9H5L6 903 aa13.69□□□□□ -0.22
RPA3-202ENST00000396682 UBE2TQ9NPD8 197 aaPredicted RBP13.69□□□□□ -0.22
RPA3-202ENST00000396682 GDF3Q9NR23 364 aa13.69□□□□□ -0.22
RPA3-202ENST00000396682 HOOK1Q9UJC3 728 aaKnown RBP13.69□□□□□ -0.22
RPA3-202ENST00000396682 SARDHQ9UL12 918 aa13.69□□□□□ -0.22
RPA3-202ENST00000396682 BECN2A8MW95 431 aa13.68□□□□□ -0.22
RPA3-202ENST00000396682 TLR4O00206 839 aa13.68□□□□□ -0.22
RPA3-202ENST00000396682 RTN2O75298 545 aa13.68□□□□□ -0.22
RPA3-202ENST00000396682 RFPL3O75679 317 aa13.68□□□□□ -0.22
RPA3-202ENST00000396682 LDOC1O95751 146 aaPredicted RBP13.68□□□□□ -0.22
RPA3-202ENST00000396682 AFPP02771 609 aaKnown RBP13.68□□□□□ -0.22
RPA3-202ENST00000396682 PPP1R2P41236 205 aa13.68□□□□□ -0.22
RPA3-202ENST00000396682 PLK1P53350 603 aa13.68□□□□□ -0.22
RPA3-202ENST00000396682 STX17P56962 302 aa13.68□□□□□ -0.22
RPA3-202ENST00000396682 CENPCQ03188 943 aa13.68□□□□□ -0.22
RPA3-202ENST00000396682 BNIP3Q12983 259 aa13.68□□□□□ -0.22
RPA3-202ENST00000396682 SLC12A1Q13621 1099 aa13.68□□□□□ -0.22
RPA3-202ENST00000396682 SFMBT2Q5VUG0 894 aa13.68□□□□□ -0.22
RPA3-202ENST00000396682 FBXL22Q6P050 247 aa13.68□□□□□ -0.22
RPA3-202ENST00000396682 GJB7Q6PEY0 223 aa13.68□□□□□ -0.22
RPA3-202ENST00000396682 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.68□□□□□ -0.22
RPA3-202ENST00000396682 WDTC1Q8N5D0 677 aa13.68□□□□□ -0.22
RPA3-202ENST00000396682 SKA1Q96BD8 255 aa13.68□□□□□ -0.22
RPA3-202ENST00000396682 SPAG5Q96R06 1193 aa13.68□□□□□ -0.22
RPA3-202ENST00000396682 MED15Q96RN5 788 aa13.68□□□□□ -0.22
RPA3-202ENST00000396682 ERVMER34-1Q9H9K5 563 aa13.68□□□□□ -0.22
RPA3-202ENST00000396682 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.68□□□□□ -0.22
RPA3-202ENST00000396682 MYLKQ15746 1914 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms