RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 PPP6R2O75170 966 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 IL1BP01584 269 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 ECT2LQ008S8 904 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 ENPEPQ07075 957 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 PPP3CAQ08209 521 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 STK4Q13043 487 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 CUL4BQ13620 913 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 STK38Q15208 465 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 KIF26BQ2KJY2 2108 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 ISXQ2M1V0 245 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 KMT5BQ4FZB7 885 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 FSCBQ5H9T9 825 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 NUGGCQ68CJ6 796 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 SHC4Q6S5L8 630 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 XKR5Q6UX68 686 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 KIAA0895Q8NCT3 520 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 TATDN2Q93075 761 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 GRAMD1AQ96CP6 724 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 MYEOVQ96EZ4 313 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 FAM117AQ9C073 453 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 LRRC4Q9HBW1 653 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 CISHQ9NSE2 258 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 PPP4R2Q9NY27 417 aa8.73□□□□□ -1.01
SCFD1-202ENST00000396629 CDRT15L2A8MXV6 281 aa8.72□□□□□ -1.01
SCFD1-202ENST00000396629 SPTLC2O15270 562 aa8.72□□□□□ -1.01
SCFD1-202ENST00000396629 RTN2O75298 545 aa8.72□□□□□ -1.01
SCFD1-202ENST00000396629 PIAS2O75928 621 aa8.72□□□□□ -1.01
SCFD1-202ENST00000396629 SYT1P21579 422 aa8.72□□□□□ -1.01
SCFD1-202ENST00000396629 RBMS1P29558 406 aaKnown RBP8.72□□□□□ -1.01
SCFD1-202ENST00000396629 MAT2AP31153 395 aaKnown RBP8.72□□□□□ -1.01
SCFD1-202ENST00000396629 GCLMP48507 274 aa8.72□□□□□ -1.01
SCFD1-202ENST00000396629 DUSP3P51452 185 aaPredicted RBP8.72□□□□□ -1.01
SCFD1-202ENST00000396629 METAP1P53582 386 aa8.72□□□□□ -1.01
SCFD1-202ENST00000396629 DAOAP59103 153 aa8.72□□□□□ -1.01
SCFD1-202ENST00000396629 MCCD1P59942 119 aaPredicted RBP8.72□□□□□ -1.01
SCFD1-202ENST00000396629 RPS24P62847 133 aaKnown RBP8.72□□□□□ -1.01
SCFD1-202ENST00000396629 ADIGQ0VDE8 80 aa8.72□□□□□ -1.01
SCFD1-202ENST00000396629 KCNMA1Q12791 1236 aa8.72□□□□□ -1.01
SCFD1-202ENST00000396629 ELAVL3Q14576 367 aaKnown RBP8.72□□□□□ -1.01
SCFD1-202ENST00000396629 ARL13BQ3SXY8 428 aa8.72□□□□□ -1.01
SCFD1-202ENST00000396629 SETMARQ53H47 684 aaPredicted RBP8.72□□□□□ -1.01
SCFD1-202ENST00000396629 CEP135Q66GS9 1140 aa8.72□□□□□ -1.01
SCFD1-202ENST00000396629 MMS22LQ6ZRQ5 1243 aa8.72□□□□□ -1.01
SCFD1-202ENST00000396629 CARNMT1Q8N4J0 409 aa8.72□□□□□ -1.01
SCFD1-202ENST00000396629 TMEM145Q8NBT3 493 aa8.72□□□□□ -1.01
SCFD1-202ENST00000396629 CCDC150Q8NCX0 1101 aa8.72□□□□□ -1.01
SCFD1-202ENST00000396629 KCTD13Q8WZ19 329 aa8.72□□□□□ -1.01
SCFD1-202ENST00000396629 APOLD1Q96LR9 279 aa8.72□□□□□ -1.01
SCFD1-202ENST00000396629 DDX50Q9BQ39 737 aaKnown RBP8.72□□□□□ -1.01
SCFD1-202ENST00000396629 NLGN3Q9NZ94 848 aa8.72□□□□□ -1.01
SCFD1-202ENST00000396629 SATB2Q9UPW6 733 aa8.72□□□□□ -1.01
SCFD1-202ENST00000396629 CA5BQ9Y2D0 317 aa8.72□□□□□ -1.01
SCFD1-202ENST00000396629 FRMD4BQ9Y2L6 1034 aa8.72□□□□□ -1.01
SCFD1-202ENST00000396629 PCDHGA8Q9Y5G5 932 aa8.72□□□□□ -1.01
SCFD1-202ENST00000396629 HEMK1Q9Y5R4 338 aaPredicted RBP8.72□□□□□ -1.01
SCFD1-202ENST00000396629 PIEZO2Q9H5I5 2752 aa8.72□□□□□ -1.01
SCFD1-202ENST00000396629 TYW5A2RUC4 315 aaKnown RBP8.71□□□□□ -1.01
SCFD1-202ENST00000396629 POLR2DO15514 142 aaKnown RBP8.71□□□□□ -1.01
SCFD1-202ENST00000396629 FFAR2O15552 330 aa8.71□□□□□ -1.01
SCFD1-202ENST00000396629 CUTAO60888 179 aa8.71□□□□□ -1.01
SCFD1-202ENST00000396629 LUC7L3O95232 432 aaKnown RBP8.71□□□□□ -1.01
SCFD1-202ENST00000396629 MOCS3O95396 460 aa8.71□□□□□ -1.01
SCFD1-202ENST00000396629 NTRK1P04629 796 aa8.71□□□□□ -1.01
SCFD1-202ENST00000396629 TRIM49P0CI25 452 aa8.71□□□□□ -1.01
SCFD1-202ENST00000396629 TRIM49CP0CI26 452 aa8.71□□□□□ -1.01
SCFD1-202ENST00000396629 THEGLP0DJG4 465 aa8.71□□□□□ -1.01
SCFD1-202ENST00000396629 ALPPL2P10696 532 aa8.71□□□□□ -1.01
SCFD1-202ENST00000396629 MYF5P13349 255 aa8.71□□□□□ -1.01
SCFD1-202ENST00000396629 TBX4P57082 545 aa8.71□□□□□ -1.01
SCFD1-202ENST00000396629 BST2Q10589 180 aaKnown RBP8.71□□□□□ -1.01
SCFD1-202ENST00000396629 NFATC3Q12968 1075 aa8.71□□□□□ -1.01
SCFD1-202ENST00000396629 GOLGA7BQ2TAP0 167 aa8.71□□□□□ -1.01
SCFD1-202ENST00000396629 LINC00303Q3SY05 128 aa8.71□□□□□ -1.01
SCFD1-202ENST00000396629 MS4A13Q5J8X5 152 aa8.71□□□□□ -1.01
SCFD1-202ENST00000396629 C3orf38Q5JPI3 329 aa8.71□□□□□ -1.01
SCFD1-202ENST00000396629 CCDC81Q6ZN84 652 aa8.71□□□□□ -1.01
SCFD1-202ENST00000396629 CLEC14AQ86T13 490 aa8.71□□□□□ -1.01
SCFD1-202ENST00000396629 APCDD1Q8J025 514 aa8.71□□□□□ -1.01
SCFD1-202ENST00000396629 IFT43Q96FT9 208 aa8.71□□□□□ -1.01
SCFD1-202ENST00000396629 IPO9Q96P70 1041 aaKnown RBP8.71□□□□□ -1.01
SCFD1-202ENST00000396629 SPAG5Q96R06 1193 aa8.71□□□□□ -1.01
SCFD1-202ENST00000396629 TRIM4Q9C037 500 aa8.71□□□□□ -1.01
SCFD1-202ENST00000396629 ZSCAN16Q9H4T2 348 aaPredicted RBP8.71□□□□□ -1.01
SCFD1-202ENST00000396629 CNGB3Q9NQW8 809 aa8.71□□□□□ -1.01
SCFD1-202ENST00000396629 EVA1BQ9NVM1 165 aa8.71□□□□□ -1.01
SCFD1-202ENST00000396629 TSPAN16Q9UKR8 245 aa8.71□□□□□ -1.01
SCFD1-202ENST00000396629 ENTPD2Q9Y5L3 495 aa8.71□□□□□ -1.01
SCFD1-202ENST00000396629 EFSO43281 561 aa8.71□□□□□ -1.02
SCFD1-202ENST00000396629 VAV1P15498 845 aa8.71□□□□□ -1.02
SCFD1-202ENST00000396629 MLLT3P42568 568 aaPredicted RBP8.71□□□□□ -1.02
SCFD1-202ENST00000396629 AFMP43652 599 aa8.71□□□□□ -1.02
SCFD1-202ENST00000396629 CLN3Q13286 438 aa8.71□□□□□ -1.02
SCFD1-202ENST00000396629 CDH18Q13634 790 aa8.71□□□□□ -1.02
SCFD1-202ENST00000396629 NFIL3Q16649 462 aa8.71□□□□□ -1.02
SCFD1-202ENST00000396629 SGO2Q562F6 1265 aa8.71□□□□□ -1.02
SCFD1-202ENST00000396629 AGBL4Q5VU57 503 aa8.71□□□□□ -1.02
SCFD1-202ENST00000396629 RNF219Q5W0B1 726 aaPredicted RBP8.71□□□□□ -1.02
SCFD1-202ENST00000396629 INTS8Q75QN2 995 aaKnown RBP8.71□□□□□ -1.02
SCFD1-202ENST00000396629 CCDC117Q8IWD4 279 aaPredicted RBP8.71□□□□□ -1.02
SCFD1-202ENST00000396629 IFI44Q8TCB0 444 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms