RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 TBC1D3EA0A087X179 549 aa18.09■□□□□ 0.49
EXOSC3-202ENST00000396521 TBC1D3KA0A087X1G2 549 aa18.09■□□□□ 0.49
EXOSC3-202ENST00000396521 TBC1D3FA6NER0 549 aaPredicted RBP18.09■□□□□ 0.49
EXOSC3-202ENST00000396521 TTC34A8MYJ7 566 aa18.09■□□□□ 0.49
EXOSC3-202ENST00000396521 TBC1D3LB9A6J9 549 aa18.09■□□□□ 0.49
EXOSC3-202ENST00000396521 P4HA2O15460 535 aa18.09■□□□□ 0.49
EXOSC3-202ENST00000396521 IL1BP01584 269 aa18.09■□□□□ 0.49
EXOSC3-202ENST00000396521 TBC1D3HP0C7X1 549 aa18.09■□□□□ 0.49
EXOSC3-202ENST00000396521 ACTN2P35609 894 aa18.09■□□□□ 0.49
EXOSC3-202ENST00000396521 PRCPP42785 496 aa18.09■□□□□ 0.49
EXOSC3-202ENST00000396521 RPL34P49207 117 aaKnown RBP18.09■□□□□ 0.49
EXOSC3-202ENST00000396521 SEMG2Q02383 582 aa18.09■□□□□ 0.49
EXOSC3-202ENST00000396521 MEA1Q16626 185 aa18.09■□□□□ 0.49
EXOSC3-202ENST00000396521 PRAMEF14Q5SWL7 426 aa18.09■□□□□ 0.49
EXOSC3-202ENST00000396521 ZNF658Q5TYW1 1059 aaPredicted RBP18.09■□□□□ 0.49
EXOSC3-202ENST00000396521 TBC1D3GQ6DHY5 549 aa18.09■□□□□ 0.49
EXOSC3-202ENST00000396521 TBC1D3CQ6IPX1 549 aa18.09■□□□□ 0.49
EXOSC3-202ENST00000396521 TBC1D3Q8IZP1 549 aaPredicted RBP18.09■□□□□ 0.49
EXOSC3-202ENST00000396521 AADATQ8N5Z0 425 aa18.09■□□□□ 0.49
EXOSC3-202ENST00000396521 PIP4K2CQ8TBX8 421 aa18.09■□□□□ 0.49
EXOSC3-202ENST00000396521 STK32AQ8WU08 396 aa18.09■□□□□ 0.49
EXOSC3-202ENST00000396521 SLC39A7Q92504 469 aa18.09■□□□□ 0.49
EXOSC3-202ENST00000396521 FGF11Q92914 225 aa18.09■□□□□ 0.49
EXOSC3-202ENST00000396521 PTPRN2Q92932 1015 aa18.09■□□□□ 0.49
EXOSC3-202ENST00000396521 FAM131CQ96AQ9 280 aa18.09■□□□□ 0.49
EXOSC3-202ENST00000396521 CAPN9O14815 690 aa18.08■□□□□ 0.48
EXOSC3-202ENST00000396521 RNGTTO60942 597 aaKnown RBP18.08■□□□□ 0.48
EXOSC3-202ENST00000396521 GABBR2O75899 941 aa18.08■□□□□ 0.48
EXOSC3-202ENST00000396521 SMC2O95347 1197 aa18.08■□□□□ 0.48
EXOSC3-202ENST00000396521 SLC2A3P11169 496 aa18.08■□□□□ 0.48
EXOSC3-202ENST00000396521 MZF1P28698 734 aaPredicted RBP18.08■□□□□ 0.48
EXOSC3-202ENST00000396521 PSMD8P48556 350 aa18.08■□□□□ 0.48
EXOSC3-202ENST00000396521 FMO5P49326 533 aa18.08■□□□□ 0.48
EXOSC3-202ENST00000396521 PLK1P53350 603 aa18.08■□□□□ 0.48
EXOSC3-202ENST00000396521 CCDC15Q0P6D6 951 aa18.08■□□□□ 0.48
EXOSC3-202ENST00000396521 LRMPQ12912 555 aa18.08■□□□□ 0.48
EXOSC3-202ENST00000396521 DNAJC3Q13217 504 aa18.08■□□□□ 0.48
EXOSC3-202ENST00000396521 STAT4Q14765 748 aa18.08■□□□□ 0.48
EXOSC3-202ENST00000396521 HS1BP3Q53T59 392 aa18.08■□□□□ 0.48
EXOSC3-202ENST00000396521 FSCBQ5H9T9 825 aa18.08■□□□□ 0.48
EXOSC3-202ENST00000396521 STK40Q8N2I9 435 aa18.08■□□□□ 0.48
EXOSC3-202ENST00000396521 NUCKS1Q9H1E3 243 aaKnown RBP18.08■□□□□ 0.48
EXOSC3-202ENST00000396521 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.08■□□□□ 0.48
EXOSC3-202ENST00000396521 SLCO3A1Q9UIG8 710 aa18.08■□□□□ 0.48
EXOSC3-202ENST00000396521 KALRNO60229 2985 aa18.08■□□□□ 0.48
EXOSC3-202ENST00000396521 TEX51A0A1B0GUA7 166 aa18.07■□□□□ 0.48
EXOSC3-202ENST00000396521 FYNP06241 537 aa18.07■□□□□ 0.48
EXOSC3-202ENST00000396521 ACP1P24666 158 aa18.07■□□□□ 0.48
EXOSC3-202ENST00000396521 PPP1R2P41236 205 aa18.07■□□□□ 0.48
EXOSC3-202ENST00000396521 GCNT1Q02742 428 aa18.07■□□□□ 0.48
EXOSC3-202ENST00000396521 ANKRD40Q6AI12 368 aa18.07■□□□□ 0.48
EXOSC3-202ENST00000396521 TRIM69Q86WT6 500 aa18.07■□□□□ 0.48
EXOSC3-202ENST00000396521 SMYD4Q8IYR2 804 aaPredicted RBP18.07■□□□□ 0.48
EXOSC3-202ENST00000396521 LGI2Q8N0V4 545 aa18.07■□□□□ 0.48
EXOSC3-202ENST00000396521 CFAP52Q8N1V2 620 aa18.07■□□□□ 0.48
EXOSC3-202ENST00000396521 PPM1KQ8N3J5 372 aa18.07■□□□□ 0.48
EXOSC3-202ENST00000396521 ATP6V0D2Q8N8Y2 350 aa18.07■□□□□ 0.48
EXOSC3-202ENST00000396521 OR8D1Q8WZ84 308 aa18.07■□□□□ 0.48
EXOSC3-202ENST00000396521 FAM149B1Q96BN6 582 aa18.07■□□□□ 0.48
EXOSC3-202ENST00000396521 MED15Q96RN5 788 aa18.07■□□□□ 0.48
EXOSC3-202ENST00000396521 MIS12Q9H081 205 aa18.07■□□□□ 0.48
EXOSC3-202ENST00000396521 CLCA2Q9UQC9 943 aa18.07■□□□□ 0.48
EXOSC3-202ENST00000396521 F5H5T6 163 aa18.06■□□□□ 0.48
EXOSC3-202ENST00000396521 PRAMEF26H0Y7S4 382 aa18.06■□□□□ 0.48
EXOSC3-202ENST00000396521 ALOX15BO15296 676 aa18.06■□□□□ 0.48
EXOSC3-202ENST00000396521 ZNF211Q13398 564 aaPredicted RBP18.06■□□□□ 0.48
EXOSC3-202ENST00000396521 STIM1Q13586 685 aa18.06■□□□□ 0.48
EXOSC3-202ENST00000396521 SETMARQ53H47 684 aaPredicted RBP18.06■□□□□ 0.48
EXOSC3-202ENST00000396521 NEK5Q6P3R8 708 aa18.06■□□□□ 0.48
EXOSC3-202ENST00000396521 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.06■□□□□ 0.48
EXOSC3-202ENST00000396521 MMS22LQ6ZRQ5 1243 aa18.06■□□□□ 0.48
EXOSC3-202ENST00000396521 GPR155Q7Z3F1 870 aa18.06■□□□□ 0.48
EXOSC3-202ENST00000396521 CHSY1Q86X52 802 aa18.06■□□□□ 0.48
EXOSC3-202ENST00000396521 DCBLD1Q8N8Z6 715 aa18.06■□□□□ 0.48
EXOSC3-202ENST00000396521 ADAM32Q8TC27 787 aa18.06■□□□□ 0.48
EXOSC3-202ENST00000396521 CEP63Q96MT8 703 aa18.06■□□□□ 0.48
EXOSC3-202ENST00000396521 POPDC2Q9HBU9 364 aa18.06■□□□□ 0.48
EXOSC3-202ENST00000396521 CYTH4Q9UIA0 394 aa18.06■□□□□ 0.48
EXOSC3-202ENST00000396521 HOOK1Q9UJC3 728 aaKnown RBP18.06■□□□□ 0.48
EXOSC3-202ENST00000396521 NAALADL1Q9UQQ1 740 aa18.06■□□□□ 0.48
EXOSC3-202ENST00000396521 SETXQ7Z333 2677 aaKnown RBP18.06■□□□□ 0.48
EXOSC3-202ENST00000396521 A0A1B0GVM2 712 aa18.05■□□□□ 0.48
EXOSC3-202ENST00000396521 TCAF2A6NFQ2 919 aa18.05■□□□□ 0.48
EXOSC3-202ENST00000396521 KCNU1A8MYU2 1149 aa18.05■□□□□ 0.48
EXOSC3-202ENST00000396521 PIK3R2O00459 728 aa18.05■□□□□ 0.48
EXOSC3-202ENST00000396521 PSMA7O14818 248 aa18.05■□□□□ 0.48
EXOSC3-202ENST00000396521 PLRG1O43660 514 aaKnown RBP18.05■□□□□ 0.48
EXOSC3-202ENST00000396521 MOCS2O96007 188 aaPredicted RBP18.05■□□□□ 0.48
EXOSC3-202ENST00000396521 TACR2P21452 398 aa18.05■□□□□ 0.48
EXOSC3-202ENST00000396521 GLDCP23378 1020 aa18.05■□□□□ 0.48
EXOSC3-202ENST00000396521 BRD2P25440 801 aaKnown RBP18.05■□□□□ 0.48
EXOSC3-202ENST00000396521 ITPKBP27987 946 aa18.05■□□□□ 0.48
EXOSC3-202ENST00000396521 DRD3P35462 400 aa18.05■□□□□ 0.48
EXOSC3-202ENST00000396521 CTSOP43234 321 aaPredicted RBP18.05■□□□□ 0.48
EXOSC3-202ENST00000396521 GPD2P43304 727 aa18.05■□□□□ 0.48
EXOSC3-202ENST00000396521 YWHAZP63104 245 aaKnown RBP18.05■□□□□ 0.48
EXOSC3-202ENST00000396521 BNIP3Q12983 259 aa18.05■□□□□ 0.48
EXOSC3-202ENST00000396521 RABGAP1LQ5R372 815 aa18.05■□□□□ 0.48
EXOSC3-202ENST00000396521 KANSL1Q7Z3B3 1105 aa18.05■□□□□ 0.48
EXOSC3-202ENST00000396521 APCDD1Q8J025 514 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms