RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 RPL10LQ96L21 214 aaKnown RBP5.96□□□□□ -1.46
AP3S1-202ENST00000395548 CAMK1GQ96NX5 476 aa5.96□□□□□ -1.46
AP3S1-202ENST00000395548 GAD1Q99259 594 aa5.96□□□□□ -1.46
AP3S1-202ENST00000395548 SELENOOQ9BVL4 669 aa5.96□□□□□ -1.46
AP3S1-202ENST00000395548 ZNF703Q9H7S9 590 aaPredicted RBP5.96□□□□□ -1.46
AP3S1-202ENST00000395548 ARMT1Q9H993 441 aa5.96□□□□□ -1.46
AP3S1-202ENST00000395548 PLCB1Q9NQ66 1216 aa5.96□□□□□ -1.46
AP3S1-202ENST00000395548 PXMP2Q9NR77 195 aa5.96□□□□□ -1.46
AP3S1-202ENST00000395548 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.96□□□□□ -1.46
AP3S1-202ENST00000395548 TOMM22Q9NS69 142 aa5.96□□□□□ -1.46
AP3S1-202ENST00000395548 POLR3BQ9NW08 1133 aaPredicted RBP5.96□□□□□ -1.46
AP3S1-202ENST00000395548 GINS2Q9Y248 185 aa5.96□□□□□ -1.46
AP3S1-202ENST00000395548 ZNF532Q9HCE3 1301 aa5.96□□□□□ -1.46
AP3S1-202ENST00000395548 GREB1LQ9C091 1923 aaPredicted RBP5.95□□□□□ -1.46
AP3S1-202ENST00000395548 MYH4Q9Y623 1939 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 CELSR2Q9HCU4 2923 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 SMIM35A0A1B0GVV1 85 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 KRTAP23-1A1A580 65 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 SUV39H1O43463 412 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 TGM5O43548 720 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 PRKAB2O43741 272 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 GAS7O60861 476 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 ZNF202O95125 648 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 SNUPNO95149 360 aaKnown RBP5.95□□□□□ -1.46
AP3S1-202ENST00000395548 APBB3O95704 486 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 ALDH2P05091 517 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 POU2F2P09086 479 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 MYCLP12524 364 aaPredicted RBP5.95□□□□□ -1.46
AP3S1-202ENST00000395548 MCM7P33993 719 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 GLUD2P49448 558 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 NTHL1P78549 312 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 ADCY2Q08462 1091 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 PABPC1LQ4VXU2 614 aaKnown RBP5.95□□□□□ -1.46
AP3S1-202ENST00000395548 SBK1Q52WX2 424 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 PPM1LQ5SGD2 360 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 ARHGAP40Q5TG30 622 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 ICE2Q659A1 982 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 LPCAT2Q7L5N7 544 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 TMC8Q8IU68 726 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 CCDC89Q8N998 374 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 TTC17Q96AE7 1141 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 CLIP3Q96DZ5 547 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 MCRS1Q96EZ8 462 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 LGMNQ99538 433 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 HERC2P3Q9BVR0 1158 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 VN1R3Q9BXE9 311 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 IFT22Q9H7X7 185 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 OXSMQ9NWU1 459 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 PNMA8BQ9ULN7 279 aaPredicted RBP5.95□□□□□ -1.46
AP3S1-202ENST00000395548 ANKRD6Q9Y2G4 727 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 PCDHA1Q9Y5I3 950 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 NAV3Q8IVL0 2385 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 ADGRG4Q8IZF6 3080 aa5.95□□□□□ -1.46
AP3S1-202ENST00000395548 NUP205Q92621 2012 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 CELSR1Q9NYQ6 3014 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 SPTBN1Q01082 2364 aaKnown RBP5.94□□□□□ -1.46
AP3S1-202ENST00000395548 MUC22E2RYF6 1773 aaPredicted RBP5.94□□□□□ -1.46
AP3S1-202ENST00000395548 A0A0U1RQF3 1178 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 MYBPHLA2RUH7 354 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 PRRT4C9JH25 899 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 PLK4O00444 970 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 PRPF6O94906 941 aaKnown RBP5.94□□□□□ -1.46
AP3S1-202ENST00000395548 MBD4O95243 580 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 JUNP05412 331 aaKnown RBP5.94□□□□□ -1.46
AP3S1-202ENST00000395548 SERPINF2P08697 491 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 VSIG10L2P0DP72 767 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 SERPINB3P29508 390 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 HOXC13P31276 330 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 ACTN2P35609 894 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 SLC16A2P36021 539 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 DGKEP52429 567 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 CCDC173Q0VFZ6 552 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 MYBPC2Q14324 1141 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 MYBPC3Q14896 1274 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 MAN2A1Q16706 1144 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 ARHGAP29Q52LW3 1261 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 SPDYCQ5MJ68 293 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 LMBRD2Q68DH5 695 aaPredicted RBP5.94□□□□□ -1.46
AP3S1-202ENST00000395548 CRYBG3Q68DQ2 2970 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 HIST2H2BCQ6DN03 193 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 FAM111BQ6SJ93 734 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 GAREM2Q75VX8 874 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 KANSL1Q7Z3B3 1105 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 CLEC14AQ86T13 490 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 TMPRSS12Q86WS5 348 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 TMPRSS6Q8IU80 811 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 YAF2Q8IY57 180 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 GSPT2Q8IYD1 628 aaKnown RBP5.94□□□□□ -1.46
AP3S1-202ENST00000395548 GPR65Q8IYL9 337 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 COG1Q8WTW3 980 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 MIEF2Q96C03 454 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 TNIP3Q96KP6 325 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 GPHA2Q96T91 129 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 HAPLN2Q9GZV7 340 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 SMARCAD1Q9H4L7 1026 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 NRDE2Q9H7Z3 1164 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 PARPBPQ9NWS1 579 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 FNIP2Q9P278 1114 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 STX8Q9UNK0 236 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 SH3BP1Q9Y3L3 701 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms