RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 ALG14Q96F25 216 aa20.47■□□□□ 0.87
SNCA-203ENST00000394986 EIF3CQ99613 913 aaKnown RBP20.47■□□□□ 0.87
SNCA-203ENST00000394986 GABRG3Q99928 467 aa20.47■□□□□ 0.87
SNCA-203ENST00000394986 INTUQ9ULD6 942 aa20.47■□□□□ 0.87
SNCA-203ENST00000394986 REXO2Q9Y3B8 237 aaKnown RBP20.47■□□□□ 0.87
SNCA-203ENST00000394986 A0A1W2PQF6 199 aa20.46■□□□□ 0.87
SNCA-203ENST00000394986 TIMM44O43615 452 aa20.46■□□□□ 0.87
SNCA-203ENST00000394986 PROSCO94903 275 aa20.46■□□□□ 0.87
SNCA-203ENST00000394986 MOCS3O95396 460 aa20.46■□□□□ 0.87
SNCA-203ENST00000394986 DLDP09622 509 aaKnown RBP20.46■□□□□ 0.87
SNCA-203ENST00000394986 PRKCHP24723 683 aa20.46■□□□□ 0.87
SNCA-203ENST00000394986 OR1E1P30953 314 aa20.46■□□□□ 0.87
SNCA-203ENST00000394986 SSR1P43307 286 aaKnown RBP20.46■□□□□ 0.87
SNCA-203ENST00000394986 FNTBP49356 437 aa20.46■□□□□ 0.87
SNCA-203ENST00000394986 SLC25A11Q02978 314 aaKnown RBP20.46■□□□□ 0.87
SNCA-203ENST00000394986 MESDQ14696 234 aa20.46■□□□□ 0.87
SNCA-203ENST00000394986 FNDC3BQ53EP0 1204 aaKnown RBP20.46■□□□□ 0.87
SNCA-203ENST00000394986 HSPH1Q92598 858 aa20.46■□□□□ 0.87
SNCA-203ENST00000394986 ATOH1Q92858 354 aaPredicted RBP20.46■□□□□ 0.87
SNCA-203ENST00000394986 EPAS1Q99814 870 aa20.46■□□□□ 0.87
SNCA-203ENST00000394986 FEM1AQ9BSK4 669 aa20.46■□□□□ 0.87
SNCA-203ENST00000394986 MUC3BQ9H195 1237 aa20.46■□□□□ 0.87
SNCA-203ENST00000394986 VPS28Q9UK41 221 aa20.46■□□□□ 0.87
SNCA-203ENST00000394986 OR51B4Q9Y5P0 310 aa20.46■□□□□ 0.87
SNCA-203ENST00000394986 R4GN57 208 aa20.46■□□□□ 0.87
SNCA-203ENST00000394986 CACNA1HO95180 2353 aa20.46■□□□□ 0.87
SNCA-203ENST00000394986 A0A0D9SEW6 157 aa20.45■□□□□ 0.86
SNCA-203ENST00000394986 TCRBV21S2A2A0A5A6 115 aa20.45■□□□□ 0.86
SNCA-203ENST00000394986 RCCD1A6NED2 376 aa20.45■□□□□ 0.86
SNCA-203ENST00000394986 ATP5BP06576 529 aaKnown RBP20.45■□□□□ 0.86
SNCA-203ENST00000394986 RHOQP17081 205 aa20.45■□□□□ 0.86
SNCA-203ENST00000394986 EPHB2P29323 1055 aa20.45■□□□□ 0.86
SNCA-203ENST00000394986 GJC1P36383 396 aa20.45■□□□□ 0.86
SNCA-203ENST00000394986 STK19P49842 368 aaPredicted RBP20.45■□□□□ 0.86
SNCA-203ENST00000394986 ZNF528Q3MIS6 628 aa20.45■□□□□ 0.86
SNCA-203ENST00000394986 PPP6R3Q5H9R7 873 aaPredicted RBP20.45■□□□□ 0.86
SNCA-203ENST00000394986 SDE2Q6IQ49 451 aa20.45■□□□□ 0.86
SNCA-203ENST00000394986 SERPINA13PQ6UXR4 307 aa20.45■□□□□ 0.86
SNCA-203ENST00000394986 RHOT2Q8IXI1 618 aa20.45■□□□□ 0.86
SNCA-203ENST00000394986 OR7D4Q8NG98 312 aa20.45■□□□□ 0.86
SNCA-203ENST00000394986 MYO19Q96H55 970 aa20.45■□□□□ 0.86
SNCA-203ENST00000394986 MRGPRX3Q96LB0 322 aa20.45■□□□□ 0.86
SNCA-203ENST00000394986 MTG2Q9H4K7 406 aa20.45■□□□□ 0.86
SNCA-203ENST00000394986 DNAI1Q9UI46 699 aa20.45■□□□□ 0.86
SNCA-203ENST00000394986 APBB3O95704 486 aa20.44■□□□□ 0.86
SNCA-203ENST00000394986 DGKEP52429 567 aa20.44■□□□□ 0.86
SNCA-203ENST00000394986 OXCT1P55809 520 aa20.44■□□□□ 0.86
SNCA-203ENST00000394986 TPI1P60174 286 aa20.44■□□□□ 0.86
SNCA-203ENST00000394986 SLC12A1Q13621 1099 aa20.44■□□□□ 0.86
SNCA-203ENST00000394986 ENPP2Q13822 863 aa20.44■□□□□ 0.86
SNCA-203ENST00000394986 C6orf118Q5T5N4 469 aa20.44■□□□□ 0.86
SNCA-203ENST00000394986 ANO7Q6IWH7 933 aa20.44■□□□□ 0.86
SNCA-203ENST00000394986 SETD3Q86TU7 594 aaPredicted RBP20.44■□□□□ 0.86
SNCA-203ENST00000394986 NELL1Q92832 810 aa20.44■□□□□ 0.86
SNCA-203ENST00000394986 RPL10LQ96L21 214 aaKnown RBP20.44■□□□□ 0.86
SNCA-203ENST00000394986 PSMB7Q99436 277 aa20.44■□□□□ 0.86
SNCA-203ENST00000394986 NCAPGQ9BPX3 1015 aa20.44■□□□□ 0.86
SNCA-203ENST00000394986 DESI2Q9BSY9 194 aa20.44■□□□□ 0.86
SNCA-203ENST00000394986 CD248Q9HCU0 757 aa20.44■□□□□ 0.86
SNCA-203ENST00000394986 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.44■□□□□ 0.86
SNCA-203ENST00000394986 TMEM248Q9NWD8 314 aa20.44■□□□□ 0.86
SNCA-203ENST00000394986 PLA2G4CQ9UP65 541 aa20.44■□□□□ 0.86
SNCA-203ENST00000394986 ERVW-1Q9UQF0 538 aa20.44■□□□□ 0.86
SNCA-203ENST00000394986 MUC22E2RYF6 1773 aaPredicted RBP20.44■□□□□ 0.86
SNCA-203ENST00000394986 EEF2KO00418 725 aaKnown RBP20.44■□□□□ 0.86
SNCA-203ENST00000394986 SNAP91O60641 907 aa20.44■□□□□ 0.86
SNCA-203ENST00000394986 MTA2O94776 668 aa20.44■□□□□ 0.86
SNCA-203ENST00000394986 EPHX1P07099 455 aa20.44■□□□□ 0.86
SNCA-203ENST00000394986 RARAP10276 462 aa20.44■□□□□ 0.86
SNCA-203ENST00000394986 GOT1P17174 413 aa20.44■□□□□ 0.86
SNCA-203ENST00000394986 PLK1P53350 603 aa20.44■□□□□ 0.86
SNCA-203ENST00000394986 GSDMDP57764 484 aa20.44■□□□□ 0.86
SNCA-203ENST00000394986 TAS2R40P59535 323 aa20.44■□□□□ 0.86
SNCA-203ENST00000394986 MDGA1Q8NFP4 955 aa20.44■□□□□ 0.86
SNCA-203ENST00000394986 HMGB4Q8WW32 186 aa20.44■□□□□ 0.86
SNCA-203ENST00000394986 TPSD1Q9BZJ3 242 aa20.44■□□□□ 0.86
SNCA-203ENST00000394986 SLC6A17Q9H1V8 727 aa20.44■□□□□ 0.86
SNCA-203ENST00000394986 TMEM245Q9H330 911 aa20.44■□□□□ 0.86
SNCA-203ENST00000394986 NPC1O15118 1278 aa20.43■□□□□ 0.86
SNCA-203ENST00000394986 IPO7O95373 1038 aaKnown RBP20.43■□□□□ 0.86
SNCA-203ENST00000394986 ASLP04424 464 aa20.43■□□□□ 0.86
SNCA-203ENST00000394986 GLDCP23378 1020 aa20.43■□□□□ 0.86
SNCA-203ENST00000394986 ACVRL1P37023 503 aa20.43■□□□□ 0.86
SNCA-203ENST00000394986 ECT2LQ008S8 904 aa20.43■□□□□ 0.86
SNCA-203ENST00000394986 ATP13A4Q4VNC1 1196 aa20.43■□□□□ 0.86
SNCA-203ENST00000394986 CAMKK1Q8N5S9 505 aa20.43■□□□□ 0.86
SNCA-203ENST00000394986 PHOX2BQ99453 314 aa20.43■□□□□ 0.86
SNCA-203ENST00000394986 SPON2Q9BUD6 331 aa20.43■□□□□ 0.86
SNCA-203ENST00000394986 POLMQ9NP87 494 aaPredicted RBP20.43■□□□□ 0.86
SNCA-203ENST00000394986 ZSCAN32Q9NX65 697 aa20.43■□□□□ 0.86
SNCA-203ENST00000394986 SLCO3A1Q9UIG8 710 aa20.43■□□□□ 0.86
SNCA-203ENST00000394986 HYOU1Q9Y4L1 999 aa20.43■□□□□ 0.86
SNCA-203ENST00000394986 ILVBLA1L0T0 632 aa20.42■□□□□ 0.86
SNCA-203ENST00000394986 MAN1A1P33908 653 aa20.42■□□□□ 0.86
SNCA-203ENST00000394986 NOP2P46087 812 aaKnown RBP20.42■□□□□ 0.86
SNCA-203ENST00000394986 MAPKAPK2P49137 400 aa20.42■□□□□ 0.86
SNCA-203ENST00000394986 NHLH1Q02575 133 aa20.42■□□□□ 0.86
SNCA-203ENST00000394986 GNA12Q03113 381 aa20.42■□□□□ 0.86
SNCA-203ENST00000394986 SRSF5Q13243 272 aaKnown RBP20.42■□□□□ 0.86
SNCA-203ENST00000394986 TCEAL1Q15170 157 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms