RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 LBRQ14739 615 aaKnown RBP13.51□□□□□ -0.25
NFKB1-202ENST00000394820 MFSD3Q96ES6 412 aa13.51□□□□□ -0.25
NFKB1-202ENST00000394820 FSD1LQ9BXM9 530 aa13.51□□□□□ -0.25
NFKB1-202ENST00000394820 TUT1Q9H6E5 874 aaKnown RBP13.51□□□□□ -0.25
NFKB1-202ENST00000394820 DMAP1Q9NPF5 467 aaPredicted RBP13.51□□□□□ -0.25
NFKB1-202ENST00000394820 SYBUQ9NX95 663 aa13.51□□□□□ -0.25
NFKB1-202ENST00000394820 SUPT7LO94864 414 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 ITGA2BP08514 1039 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 UQCRBP14927 111 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 SERPINB9P50453 376 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 ACTR3P61158 418 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 MTX3Q5HYI7 312 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 TTC33Q6PID6 262 aaPredicted RBP13.5□□□□□ -0.25
NFKB1-202ENST00000394820 ZBTB49Q6ZSB9 765 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 NAT14Q8WUY8 206 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 OCEL1Q9H607 264 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 TRPC7Q9HCX4 862 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 PRMT7Q9NVM4 692 aaPredicted RBP13.5□□□□□ -0.25
NFKB1-202ENST00000394820 ADAMTS6Q9UKP5 1117 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 GNEQ9Y223 722 aaKnown RBP13.5□□□□□ -0.25
NFKB1-202ENST00000394820 NCF1BA6NI72 391 aaPredicted RBP13.5□□□□□ -0.25
NFKB1-202ENST00000394820 ZNF839A8K0R7 811 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 NCF1CA8MVU1 366 aaPredicted RBP13.5□□□□□ -0.25
NFKB1-202ENST00000394820 GNGT2O14610 69 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 SPAG6O75602 509 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 NCF1P14598 390 aaPredicted RBP13.5□□□□□ -0.25
NFKB1-202ENST00000394820 HDCP19113 662 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 EIF4BP23588 611 aaKnown RBP13.5□□□□□ -0.25
NFKB1-202ENST00000394820 TPP2P29144 1249 aaPredicted RBP13.5□□□□□ -0.25
NFKB1-202ENST00000394820 CDK7P50613 346 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 PSMD7P51665 324 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 GK3PQ14409 553 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 CERCAMQ5T4B2 595 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 PPP1R2P3Q6NXS1 205 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 SLC4A11Q8NBS3 891 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 HTR3CQ8WXA8 447 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 C18orf25Q96B23 403 aaPredicted RBP13.5□□□□□ -0.25
NFKB1-202ENST00000394820 DCUN1D1Q96GG9 259 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 OR52B2Q96RD2 323 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 EBNA1BP2Q99848 306 aaKnown RBP13.5□□□□□ -0.25
NFKB1-202ENST00000394820 EFHD1Q9BUP0 239 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 XYLT2Q9H1B5 865 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 CDYLQ9Y232 598 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 TMEM233B4DJY2 109 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 DNAJA2O60884 412 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 VAPBO95292 243 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 SLC25A27O95847 323 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 SERPINA6P08185 405 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 FAM58BPP0C7Q3 252 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 ABCE1P61221 599 aaKnown RBP13.5□□□□□ -0.25
NFKB1-202ENST00000394820 IRF9Q00978 393 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 MBTD1Q05BQ5 628 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 SLC9B1Q4ZJI4 515 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 CTU1Q7Z7A3 348 aaKnown RBP13.5□□□□□ -0.25
NFKB1-202ENST00000394820 KCTD4Q8WVF5 259 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 SLC39A3Q9BRY0 314 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 SLC4A5Q9BY07 1137 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 TSPYL2Q9H2G4 693 aaPredicted RBP13.5□□□□□ -0.25
NFKB1-202ENST00000394820 PPCSQ9HAB8 311 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 GOLGA2P5Q9HBQ8 144 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 CACNG4Q9UBN1 327 aa13.5□□□□□ -0.25
NFKB1-202ENST00000394820 KIAA1217Q5T5P2 1943 aa13.49□□□□□ -0.25
NFKB1-202ENST00000394820 BHMG1C9JSJ3 638 aaPredicted RBP13.49□□□□□ -0.25
NFKB1-202ENST00000394820 CCL22O00626 93 aa13.49□□□□□ -0.25
NFKB1-202ENST00000394820 RPL10P27635 214 aaKnown RBP13.49□□□□□ -0.25
NFKB1-202ENST00000394820 TPI1P60174 286 aa13.49□□□□□ -0.25
NFKB1-202ENST00000394820 MPP3Q13368 585 aa13.49□□□□□ -0.25
NFKB1-202ENST00000394820 SLC10A6Q3KNW5 377 aa13.49□□□□□ -0.25
NFKB1-202ENST00000394820 ZIK1Q3SY52 487 aaPredicted RBP13.49□□□□□ -0.25
NFKB1-202ENST00000394820 PPP1R26Q5T8A7 1209 aaPredicted RBP13.49□□□□□ -0.25
NFKB1-202ENST00000394820 SCIMPQ6UWF3 145 aa13.49□□□□□ -0.25
NFKB1-202ENST00000394820 SAPCD2Q86UD0 394 aa13.49□□□□□ -0.25
NFKB1-202ENST00000394820 SLCO2A1Q92959 643 aa13.49□□□□□ -0.25
NFKB1-202ENST00000394820 TRIM8Q9BZR9 551 aa13.49□□□□□ -0.25
NFKB1-202ENST00000394820 PRDM12Q9H4Q4 367 aa13.49□□□□□ -0.25
NFKB1-202ENST00000394820 WDR41Q9HAD4 459 aa13.49□□□□□ -0.25
NFKB1-202ENST00000394820 UBA6A0AVT1 1052 aaPredicted RBP13.49□□□□□ -0.25
NFKB1-202ENST00000394820 NEMP2A6NFY4 417 aa13.49□□□□□ -0.25
NFKB1-202ENST00000394820 H3BSA7 217 aa13.49□□□□□ -0.25
NFKB1-202ENST00000394820 EEF2KO00418 725 aaKnown RBP13.49□□□□□ -0.25
NFKB1-202ENST00000394820 GMNNO75496 209 aa13.49□□□□□ -0.25
NFKB1-202ENST00000394820 TCEA3O75764 348 aa13.49□□□□□ -0.25
NFKB1-202ENST00000394820 LSM8O95777 96 aaKnown RBP13.49□□□□□ -0.25
NFKB1-202ENST00000394820 TFPTP0C1Z6 253 aa13.49□□□□□ -0.25
NFKB1-202ENST00000394820 EEF1DP29692 281 aaKnown RBP13.49□□□□□ -0.25
NFKB1-202ENST00000394820 YWHAHQ04917 246 aaPredicted RBP13.49□□□□□ -0.25
NFKB1-202ENST00000394820 LDLRAP1Q5SW96 308 aa13.49□□□□□ -0.25
NFKB1-202ENST00000394820 XYLT1Q86Y38 959 aa13.49□□□□□ -0.25
NFKB1-202ENST00000394820 EXOC8Q8IYI6 725 aa13.49□□□□□ -0.25
NFKB1-202ENST00000394820 OR6J1Q8NGC5 347 aa13.49□□□□□ -0.25
NFKB1-202ENST00000394820 PCDH19Q8TAB3 1148 aa13.49□□□□□ -0.25
NFKB1-202ENST00000394820 PEBP4Q96S96 227 aa13.49□□□□□ -0.25
NFKB1-202ENST00000394820 PIGRP01833 764 aa13.49□□□□□ -0.25
NFKB1-202ENST00000394820 CKMT2P17540 419 aa13.49□□□□□ -0.25
NFKB1-202ENST00000394820 XRCC1P18887 633 aaPredicted RBP13.49□□□□□ -0.25
NFKB1-202ENST00000394820 SNX16P57768 344 aa13.49□□□□□ -0.25
NFKB1-202ENST00000394820 TCEAL1Q15170 157 aa13.49□□□□□ -0.25
NFKB1-202ENST00000394820 PMF1Q6P1K2 205 aa13.49□□□□□ -0.25
NFKB1-202ENST00000394820 GK5Q6ZS86 529 aa13.49□□□□□ -0.25
NFKB1-202ENST00000394820 TMC7Q7Z402 723 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms