RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 TXNDC16Q9P2K2 825 aa18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 TUBGCP4Q9UGJ1 667 aa18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 DCXO43602 365 aa18.77■□□□□ 0.6
PCDHA1-202ENST00000394633 LGALS2P05162 132 aa18.77■□□□□ 0.6
PCDHA1-202ENST00000394633 ZNF286BP0CG31 522 aa18.77■□□□□ 0.6
PCDHA1-202ENST00000394633 UQCRBP14927 111 aa18.77■□□□□ 0.6
PCDHA1-202ENST00000394633 MAGEA12P43365 314 aa18.77■□□□□ 0.6
PCDHA1-202ENST00000394633 BST2Q10589 180 aaKnown RBP18.77■□□□□ 0.6
PCDHA1-202ENST00000394633 CNPY1Q3B7I2 92 aa18.77■□□□□ 0.6
PCDHA1-202ENST00000394633 CFAP157Q5JU67 520 aa18.77■□□□□ 0.6
PCDHA1-202ENST00000394633 STRADAQ7RTN6 431 aa18.77■□□□□ 0.6
PCDHA1-202ENST00000394633 TMPRSS4Q9NRS4 437 aa18.77■□□□□ 0.6
PCDHA1-202ENST00000394633 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.77■□□□□ 0.6
PCDHA1-202ENST00000394633 SEPT10Q9P0V9 454 aa18.77■□□□□ 0.6
PCDHA1-202ENST00000394633 TBC1D30Q9Y2I9 924 aa18.77■□□□□ 0.6
PCDHA1-202ENST00000394633 PCDHB12Q9Y5F1 795 aa18.77■□□□□ 0.6
PCDHA1-202ENST00000394633 RPS6KL1Q9Y6S9 549 aa18.77■□□□□ 0.6
PCDHA1-202ENST00000394633 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.77■□□□□ 0.59
PCDHA1-202ENST00000394633 AP1G2O75843 785 aa18.77■□□□□ 0.59
PCDHA1-202ENST00000394633 STK10O94804 968 aaKnown RBP18.77■□□□□ 0.59
PCDHA1-202ENST00000394633 COX4I1P13073 169 aa18.77■□□□□ 0.59
PCDHA1-202ENST00000394633 SCNN1AP37088 669 aa18.77■□□□□ 0.59
PCDHA1-202ENST00000394633 GARSP41250 739 aaKnown RBP18.77■□□□□ 0.59
PCDHA1-202ENST00000394633 GLUD2P49448 558 aa18.77■□□□□ 0.59
PCDHA1-202ENST00000394633 TBL3Q12788 808 aaKnown RBP18.77■□□□□ 0.59
PCDHA1-202ENST00000394633 OLIG2Q13516 323 aa18.77■□□□□ 0.59
PCDHA1-202ENST00000394633 CCDC153Q494R4 210 aa18.77■□□□□ 0.59
PCDHA1-202ENST00000394633 LIN52Q52LA3 116 aa18.77■□□□□ 0.59
PCDHA1-202ENST00000394633 GRTP1Q5TC63 336 aa18.77■□□□□ 0.59
PCDHA1-202ENST00000394633 TNS4Q8IZW8 715 aa18.77■□□□□ 0.59
PCDHA1-202ENST00000394633 FBXW8Q8N3Y1 598 aa18.77■□□□□ 0.59
PCDHA1-202ENST00000394633 ZNF781Q8N8C0 355 aa18.77■□□□□ 0.59
PCDHA1-202ENST00000394633 ISL2Q96A47 359 aa18.77■□□□□ 0.59
PCDHA1-202ENST00000394633 CPNE1Q99829 537 aa18.77■□□□□ 0.59
PCDHA1-202ENST00000394633 CDH19Q9H159 772 aa18.77■□□□□ 0.59
PCDHA1-202ENST00000394633 COG4Q9H9E3 785 aa18.77■□□□□ 0.59
PCDHA1-202ENST00000394633 MAN1C1Q9NR34 630 aa18.77■□□□□ 0.59
PCDHA1-202ENST00000394633 PDCD11Q14690 1871 aaKnown RBP18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 POLBP06746 335 aa18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 F7P08709 466 aaPredicted RBP18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 PIM1P11309 404 aaPredicted RBP18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 RAG1P15918 1043 aa18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 RPL34P49207 117 aaKnown RBP18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 BCAT1P54687 386 aa18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 HTRA3P83110 453 aa18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 NOGQ13253 232 aa18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 SLC9B1Q4ZJI4 515 aa18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 EPGNQ6UW88 154 aa18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 NAPRTQ6XQN6 538 aa18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 UNC93AQ86WB7 457 aa18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 ZNF567Q8N184 647 aa18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 ARHGAP18Q8N392 663 aa18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 ANKRD52Q8NB46 1076 aa18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 C18orf25Q96B23 403 aaPredicted RBP18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 ATXN7L3BQ96GX2 97 aa18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 SPATA16Q9BXB7 569 aa18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 VCX3BQ9H321 246 aa18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 RCOR3Q9P2K3 495 aaPredicted RBP18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 H3BNX3 289 aa18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 PDGFRBP09619 1106 aa18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 PRDX6P30041 224 aa18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 GSTT1P30711 240 aa18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 XIAPP98170 497 aa18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 KLF10Q13118 480 aa18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 MED21Q13503 144 aa18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 LAMC2Q13753 1193 aa18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 DEFB115Q30KQ5 88 aa18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 DUSP28Q4G0W2 176 aa18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 SPANXN3Q5MJ09 141 aa18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 MAPK15Q8TD08 544 aa18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 RBBP8Q99708 897 aa18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 SNTG2Q9NY99 539 aa18.76■□□□□ 0.59
PCDHA1-202ENST00000394633 E9PBE3 544 aa18.75■□□□□ 0.59
PCDHA1-202ENST00000394633 KLHL41O60662 606 aa18.75■□□□□ 0.59
PCDHA1-202ENST00000394633 SERPINB6P35237 376 aa18.75■□□□□ 0.59
PCDHA1-202ENST00000394633 SULT1E1P49888 294 aa18.75■□□□□ 0.59
PCDHA1-202ENST00000394633 MTTPP55157 894 aa18.75■□□□□ 0.59
PCDHA1-202ENST00000394633 PITX1P78337 314 aaPredicted RBP18.75■□□□□ 0.59
PCDHA1-202ENST00000394633 DLG1Q12959 904 aa18.75■□□□□ 0.59
PCDHA1-202ENST00000394633 RASIP1Q5U651 963 aa18.75■□□□□ 0.59
PCDHA1-202ENST00000394633 TP53INP2Q8IXH6 220 aa18.75■□□□□ 0.59
PCDHA1-202ENST00000394633 ST13P4Q8IZP2 240 aaPredicted RBP18.75■□□□□ 0.59
PCDHA1-202ENST00000394633 DEFB106AQ8N104 65 aa18.75■□□□□ 0.59
PCDHA1-202ENST00000394633 PPTC7Q8NI37 304 aa18.75■□□□□ 0.59
PCDHA1-202ENST00000394633 RNF139Q8WU17 664 aa18.75■□□□□ 0.59
PCDHA1-202ENST00000394633 NDRG1Q92597 394 aaKnown RBP18.75■□□□□ 0.59
PCDHA1-202ENST00000394633 PRDM12Q9H4Q4 367 aa18.75■□□□□ 0.59
PCDHA1-202ENST00000394633 RNF19AQ9NV58 838 aa18.75■□□□□ 0.59
PCDHA1-202ENST00000394633 ADAM28Q9UKQ2 775 aa18.75■□□□□ 0.59
PCDHA1-202ENST00000394633 ARHGAP26Q9UNA1 814 aa18.75■□□□□ 0.59
PCDHA1-202ENST00000394633 G3V2L1 256 aa18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 HSPA4LO95757 839 aa18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 VCLP18206 1134 aa18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 TRIP10Q15642 601 aa18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 FSCBQ5H9T9 825 aa18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 OTUD1Q5VV17 481 aaPredicted RBP18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 OLFML2BQ68BL8 750 aa18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 KBTBD6Q86V97 674 aa18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 CCNYQ8ND76 341 aa18.74■□□□□ 0.59
PCDHA1-202ENST00000394633 OR52K1Q8NGK4 314 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms