RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 HMGA1P17096 107 aaKnown RBP21.87■■□□□ 1.09
SPHK1-202ENST00000392496 GRIA1P42261 906 aa21.87■■□□□ 1.09
SPHK1-202ENST00000392496 ALDH1A3P47895 512 aa21.87■■□□□ 1.09
SPHK1-202ENST00000392496 NUGGCQ68CJ6 796 aa21.87■■□□□ 1.09
SPHK1-202ENST00000392496 ADGRD1Q6QNK2 874 aa21.87■■□□□ 1.09
SPHK1-202ENST00000392496 PAFAH2Q99487 392 aa21.87■■□□□ 1.09
SPHK1-202ENST00000392496 MPP6Q9NZW5 540 aa21.87■■□□□ 1.09
SPHK1-202ENST00000392496 SENP1Q9P0U3 644 aa21.87■■□□□ 1.09
SPHK1-202ENST00000392496 RSPH14Q9UHP6 348 aa21.87■■□□□ 1.09
SPHK1-202ENST00000392496 DNMT3LQ9UJW3 386 aa21.87■■□□□ 1.09
SPHK1-202ENST00000392496 VANGL2Q9ULK5 521 aa21.87■■□□□ 1.09
SPHK1-202ENST00000392496 MAFFQ9ULX9 164 aa21.87■■□□□ 1.09
SPHK1-202ENST00000392496 YIPF1Q9Y548 306 aa21.87■■□□□ 1.09
SPHK1-202ENST00000392496 DOCK4Q8N1I0 1966 aa21.86■■□□□ 1.09
SPHK1-202ENST00000392496 F5H423 210 aaPredicted RBP21.86■■□□□ 1.09
SPHK1-202ENST00000392496 SUN1O94901 812 aa21.86■■□□□ 1.09
SPHK1-202ENST00000392496 CD68P34810 354 aaPredicted RBP21.86■■□□□ 1.09
SPHK1-202ENST00000392496 ATP5C1P36542 298 aaKnown RBP21.86■■□□□ 1.09
SPHK1-202ENST00000392496 KLHDC10Q6PID8 442 aa21.86■■□□□ 1.09
SPHK1-202ENST00000392496 OTOP2Q7RTS6 562 aa21.86■■□□□ 1.09
SPHK1-202ENST00000392496 TRABD2AQ86V40 505 aa21.86■■□□□ 1.09
SPHK1-202ENST00000392496 UMODL1-AS1Q8N2C9 162 aa21.86■■□□□ 1.09
SPHK1-202ENST00000392496 TRMT2BQ96GJ1 504 aaKnown RBP21.86■■□□□ 1.09
SPHK1-202ENST00000392496 ZNF512Q96ME7 567 aaPredicted RBP21.86■■□□□ 1.09
SPHK1-202ENST00000392496 EPN3Q9H201 632 aa21.86■■□□□ 1.09
SPHK1-202ENST00000392496 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.86■■□□□ 1.09
SPHK1-202ENST00000392496 NDFIP2Q9NV92 336 aa21.86■■□□□ 1.09
SPHK1-202ENST00000392496 TMEM248Q9NWD8 314 aa21.86■■□□□ 1.09
SPHK1-202ENST00000392496 TTLL3Q9Y4R7 772 aa21.86■■□□□ 1.09
SPHK1-202ENST00000392496 ZNF840PA6NDX5 716 aa21.85■■□□□ 1.09
SPHK1-202ENST00000392496 DRGXA6NNA5 263 aa21.85■■□□□ 1.09
SPHK1-202ENST00000392496 RASA4BC9J798 803 aa21.85■■□□□ 1.09
SPHK1-202ENST00000392496 RASA4O43374 803 aa21.85■■□□□ 1.09
SPHK1-202ENST00000392496 MAFKO60675 156 aa21.85■■□□□ 1.09
SPHK1-202ENST00000392496 AP2A1O95782 977 aa21.85■■□□□ 1.09
SPHK1-202ENST00000392496 JCHAINP01591 159 aa21.85■■□□□ 1.09
SPHK1-202ENST00000392496 MSH2P43246 934 aa21.85■■□□□ 1.09
SPHK1-202ENST00000392496 NDST2P52849 883 aa21.85■■□□□ 1.09
SPHK1-202ENST00000392496 EFTUD2Q15029 972 aaKnown RBP eCLIP21.85■■□□□ 1.094e-10■■■■□ 21.1
SPHK1-202ENST00000392496 TIGD7Q6NT04 549 aaPredicted RBP21.85■■□□□ 1.09
SPHK1-202ENST00000392496 AGAP3Q96P47 875 aa21.85■■□□□ 1.09
SPHK1-202ENST00000392496 PRMT1Q99873 361 aaKnown RBP21.85■■□□□ 1.09
SPHK1-202ENST00000392496 LBHD1Q9BQE6 289 aaPredicted RBP21.85■■□□□ 1.09
SPHK1-202ENST00000392496 GORASP1Q9BQQ3 440 aa21.85■■□□□ 1.09
SPHK1-202ENST00000392496 MRPL17Q9NRX2 175 aaKnown RBP21.85■■□□□ 1.09
SPHK1-202ENST00000392496 PCDHB12Q9Y5F1 795 aa21.85■■□□□ 1.09
SPHK1-202ENST00000392496 SDR42E2A6NKP2 422 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 MATN3O15232 486 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 HMBSP08397 361 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 BRAFP15056 766 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 CREMQ03060 361 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 HECTD3Q5T447 861 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 RAP1GAP2Q684P5 730 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 UNC5AQ6ZN44 842 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 ARHGAP36Q6ZRI8 547 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 CCNJLQ8IV13 435 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 KLHDC8BQ8IXV7 354 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 SRRM1Q8IYB3 904 aaKnown RBP21.84■■□□□ 1.09
SPHK1-202ENST00000392496 IL12RB2Q99665 862 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 PLAC1Q9HBJ0 212 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 INTS9Q9NV88 658 aaKnown RBP21.84■■□□□ 1.09
SPHK1-202ENST00000392496 TRPM5Q9NZQ8 1165 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 PCDHA11Q9Y5I1 949 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 MAD1L1Q9Y6D9 718 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 ARHGAP42A6NI28 874 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 PSMD3O43242 534 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 CACNG3O60359 315 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 C1QAP02745 245 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 CCNB1P14635 433 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 CREB1P16220 341 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 NFKB1P19838 968 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 PRKCHP24723 683 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 HTRA4P83105 476 aaPredicted RBP21.84■■□□□ 1.09
SPHK1-202ENST00000392496 PPIGQ13427 754 aaKnown RBP eCLIP21.84■■□□□ 1.091e-10■■■□□ 15.5
SPHK1-202ENST00000392496 PRPSAP1Q14558 356 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 VEPH1Q14D04 833 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 KCTD11Q693B1 232 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 FBXL22Q6P050 247 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 TCEAL8Q8IYN2 117 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 MPP5Q8N3R9 675 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 GSDMBQ8TAX9 411 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 DCAKDQ8WVC6 231 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 SLC44A1Q8WWI5 657 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 STAMBPL1Q96FJ0 436 aa21.84■■□□□ 1.09
SPHK1-202ENST00000392496 TMEM120BA0PK00 339 aa21.83■■□□□ 1.09
SPHK1-202ENST00000392496 KRT15P19012 456 aa21.83■■□□□ 1.09
SPHK1-202ENST00000392496 ELF1P32519 619 aa21.83■■□□□ 1.09
SPHK1-202ENST00000392496 PPP3CCP48454 512 aa21.83■■□□□ 1.09
SPHK1-202ENST00000392496 KBTBD12Q3ZCT8 623 aa21.83■■□□□ 1.09
SPHK1-202ENST00000392496 STEAP4Q687X5 459 aa21.83■■□□□ 1.09
SPHK1-202ENST00000392496 CYS1Q717R9 158 aa21.83■■□□□ 1.09
SPHK1-202ENST00000392496 C16orf59Q7L2K0 433 aa21.83■■□□□ 1.09
SPHK1-202ENST00000392496 ATXN2LQ8WWM7 1075 aaKnown RBP21.83■■□□□ 1.09
SPHK1-202ENST00000392496 MRRFQ96E11 262 aaKnown RBP21.83■■□□□ 1.09
SPHK1-202ENST00000392496 NAT9Q9BTE0 207 aa21.83■■□□□ 1.09
SPHK1-202ENST00000392496 NOL6Q9H6R4 1146 aaKnown RBP21.83■■□□□ 1.09
SPHK1-202ENST00000392496 RXFP1Q9HBX9 757 aa21.83■■□□□ 1.09
SPHK1-202ENST00000392496 NYNRINQ9P2P1 1898 aaKnown RBP21.83■■□□□ 1.08
SPHK1-202ENST00000392496 ERICH4A6NGS2 130 aa21.82■■□□□ 1.08
SPHK1-202ENST00000392496 FOXO6A8MYZ6 492 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms