RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 ZFYVE27Q5T4F4 411 aa19.46■□□□□ 0.71
CCDC50-202ENST00000392456 BCL7CQ8WUZ0 217 aaPredicted RBP19.46■□□□□ 0.71
CCDC50-202ENST00000392456 NSMCE3Q96MG7 304 aa19.46■□□□□ 0.71
CCDC50-202ENST00000392456 PCDHB8Q9UN66 801 aa19.46■□□□□ 0.71
CCDC50-202ENST00000392456 TLDC2A0PJX2 215 aa19.45■□□□□ 0.7
CCDC50-202ENST00000392456 GOLGA8TH3BQL2 631 aa19.45■□□□□ 0.7
CCDC50-202ENST00000392456 FSCN2O14926 492 aa19.45■□□□□ 0.7
CCDC50-202ENST00000392456 OPHN1O60890 802 aa19.45■□□□□ 0.7
CCDC50-202ENST00000392456 CD48P09326 243 aa19.45■□□□□ 0.7
CCDC50-202ENST00000392456 SEPT7Q16181 437 aaKnown RBP19.45■□□□□ 0.7
CCDC50-202ENST00000392456 CYP4V2Q6ZWL3 525 aaPredicted RBP19.45■□□□□ 0.7
CCDC50-202ENST00000392456 C1orf54Q8WWF1 131 aa19.45■□□□□ 0.7
CCDC50-202ENST00000392456 CNPY3Q9BT09 278 aa19.45■□□□□ 0.7
CCDC50-202ENST00000392456 A0A1W2PQ67 120 aa19.45■□□□□ 0.7
CCDC50-202ENST00000392456 TMEM189-UBE2V1I3L0A0 370 aa19.45■□□□□ 0.7
CCDC50-202ENST00000392456 KCNJ1P48048 391 aa19.45■□□□□ 0.7
CCDC50-202ENST00000392456 NAA20P61599 178 aa19.45■□□□□ 0.7
CCDC50-202ENST00000392456 LRRC14Q15048 493 aa19.45■□□□□ 0.7
CCDC50-202ENST00000392456 FAM117BQ6P1L5 589 aa19.45■□□□□ 0.7
CCDC50-202ENST00000392456 C1orf228Q6PIY5 440 aa19.45■□□□□ 0.7
CCDC50-202ENST00000392456 HFE2Q6ZVN8 426 aa19.45■□□□□ 0.7
CCDC50-202ENST00000392456 ACAD11Q709F0 780 aa19.45■□□□□ 0.7
CCDC50-202ENST00000392456 EXD1Q8NHP7 514 aa19.45■□□□□ 0.7
CCDC50-202ENST00000392456 ATG4AQ8WYN0 398 aa19.45■□□□□ 0.7
CCDC50-202ENST00000392456 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.45■□□□□ 0.73e-8■■■■□ 22.9
CCDC50-202ENST00000392456 ADAM28Q9UKQ2 775 aa19.45■□□□□ 0.7
CCDC50-202ENST00000392456 DSEQ9UL01 958 aa19.45■□□□□ 0.7
CCDC50-202ENST00000392456 HHLA1C9JL84 531 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 KRT1P04264 644 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 GALTP07902 379 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 TYMPP19971 482 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 TKTL1P51854 596 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 PITX1P78337 314 aaPredicted RBP19.44■□□□□ 0.7
CCDC50-202ENST00000392456 DSG1Q02413 1049 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 FAM171A1Q5VUB5 890 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 KAZNQ674X7 775 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 KLHDC10Q6PID8 442 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 RBM44Q6ZP01 1051 aaKnown RBP19.44■□□□□ 0.7
CCDC50-202ENST00000392456 SLC26A9Q7LBE3 791 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 MICAL3Q7RTP6 2002 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 TAS1R1Q7RTX1 841 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 ARHGAP24Q8N264 748 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 SLITRK1Q96PX8 696 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 ECSITQ9BQ95 431 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 SELENONQ9NZV5 590 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 ZNHIT2Q9UHR6 403 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 VWA8A3KMH1 1905 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 ACRP10323 421 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 PTPN4P29074 926 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 CSE1LP55060 971 aaKnown RBP19.44■□□□□ 0.7
CCDC50-202ENST00000392456 IKBKEQ14164 716 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 CTC1Q2NKJ3 1217 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 ARL13BQ3SXY8 428 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 C6orf118Q5T5N4 469 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 LRRC38Q5VT99 294 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 IZUMO2Q6UXV1 221 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 DTX3LQ8TDB6 740 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 CKAP2Q8WWK9 683 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 PRICKLE1Q96MT3 831 aaPredicted RBP19.44■□□□□ 0.7
CCDC50-202ENST00000392456 MAGEB5Q9BZ81 275 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 OSBPL8Q9BZF1 889 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 DNAI2Q9GZS0 605 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 NGRNQ9NPE2 291 aaKnown RBP19.44■□□□□ 0.7
CCDC50-202ENST00000392456 CHST7Q9NS84 486 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 USP18Q9UMW8 372 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 CHKBQ9Y259 395 aa19.44■□□□□ 0.7
CCDC50-202ENST00000392456 UTP11Q9Y3A2 253 aaKnown RBP19.44■□□□□ 0.7
CCDC50-202ENST00000392456 C3orf70A6NLC5 250 aaPredicted RBP19.43■□□□□ 0.7
CCDC50-202ENST00000392456 ACADSBP45954 432 aa19.43■□□□□ 0.7
CCDC50-202ENST00000392456 DEFB103AP81534 67 aa19.43■□□□□ 0.7
CCDC50-202ENST00000392456 KLF1Q13351 362 aaPredicted RBP19.43■□□□□ 0.7
CCDC50-202ENST00000392456 CAPN12Q6ZSI9 719 aa19.43■□□□□ 0.7
CCDC50-202ENST00000392456 THEM5Q8N1Q8 247 aa19.43■□□□□ 0.7
CCDC50-202ENST00000392456 ULBP1Q9BZM6 244 aa19.43■□□□□ 0.7
CCDC50-202ENST00000392456 LRRC4Q9HBW1 653 aa19.43■□□□□ 0.7
CCDC50-202ENST00000392456 CDH23Q9H251 3354 aa19.43■□□□□ 0.7
CCDC50-202ENST00000392456 TNFRSF10AO00220 468 aa19.43■□□□□ 0.7
CCDC50-202ENST00000392456 OAZ2O95190 189 aa19.43■□□□□ 0.7
CCDC50-202ENST00000392456 TRUB2O95900 331 aaKnown RBP19.43■□□□□ 0.7
CCDC50-202ENST00000392456 CYP2F1P24903 491 aa19.43■□□□□ 0.7
CCDC50-202ENST00000392456 MRPS5P82675 430 aaKnown RBP19.43■□□□□ 0.7
CCDC50-202ENST00000392456 VARS2Q5ST30 1063 aaKnown RBP19.43■□□□□ 0.7
CCDC50-202ENST00000392456 CNKSR3Q6P9H4 555 aa19.43■□□□□ 0.7
CCDC50-202ENST00000392456 ZDHHC17Q8IUH5 632 aa19.43■□□□□ 0.7
CCDC50-202ENST00000392456 FAM172AQ8WUF8 416 aa19.43■□□□□ 0.7
CCDC50-202ENST00000392456 KCTD13Q8WZ19 329 aa19.43■□□□□ 0.7
CCDC50-202ENST00000392456 FAM149B1Q96BN6 582 aa19.43■□□□□ 0.7
CCDC50-202ENST00000392456 TRIM51Q9BSJ1 452 aa19.43■□□□□ 0.7
CCDC50-202ENST00000392456 ASNSD1Q9NWL6 643 aa19.43■□□□□ 0.7
CCDC50-202ENST00000392456 FBXO21O94952 628 aa19.42■□□□□ 0.7
CCDC50-202ENST00000392456 PARNO95453 639 aaKnown RBP19.42■□□□□ 0.7
CCDC50-202ENST00000392456 USP17L7P0C7H9 530 aa19.42■□□□□ 0.7
CCDC50-202ENST00000392456 RAB15P59190 212 aa19.42■□□□□ 0.7
CCDC50-202ENST00000392456 E2F2Q14209 437 aa19.42■□□□□ 0.7
CCDC50-202ENST00000392456 TGFBIQ15582 683 aa19.42■□□□□ 0.7
CCDC50-202ENST00000392456 ZNF423Q2M1K9 1284 aa19.42■□□□□ 0.7
CCDC50-202ENST00000392456 SLC39A12Q504Y0 691 aa19.42■□□□□ 0.7
CCDC50-202ENST00000392456 RSPO2Q6UXX9 243 aaPredicted RBP19.42■□□□□ 0.7
CCDC50-202ENST00000392456 NECAB2Q7Z6G3 386 aa19.42■□□□□ 0.7
CCDC50-202ENST00000392456 PPP1R14CQ8TAE6 165 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms