RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 KRT73Q86Y46 540 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 ZNF280BQ86YH2 543 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 LINC00346Q8IVM7 164 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 DIS3L2Q8IYB7 885 aaKnown RBP2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 CEP57L1Q8IYX8 460 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 RBMXL3Q8N7X1 1067 aaKnown RBP2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 PSD4Q8NDX1 1056 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 BRIX1Q8TDN6 353 aaKnown RBP2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 SNX19Q92543 992 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 MTFMTQ96DP5 389 aaKnown RBP2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 ELP4Q96EB1 424 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 FAM120BQ96EK7 910 aaKnown RBP2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 APOPT1Q96IL0 206 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 HIC2Q96JB3 615 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 NCAPGQ9BPX3 1015 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 CLSTN3Q9BQT9 956 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 FUZQ9BT04 418 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 STRA6Q9BX79 667 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 SEMA4CQ9C0C4 833 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 PRSS22Q9GZN4 317 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 OPA3Q9H6K4 179 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 GRPEL1Q9HAV7 217 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 XAB2Q9HCS7 855 aaKnown RBP2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 WDR35Q9P2L0 1181 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 DNAJB9Q9UBS3 223 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 RGS17Q9UGC6 210 aaPredicted RBP2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 FEZ2Q9UHY8 353 aaPredicted RBP2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 TBX20Q9UMR3 447 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 CNTN6Q9UQ52 1028 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 NEU2Q9Y3R4 380 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 SNX8Q9Y5X2 465 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 PASKQ96RG2 1323 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 A0A1W2PQ09 198 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 MBD3L4A6NDZ8 208 aaPredicted RBP2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 MBD3L3A6NE82 208 aaPredicted RBP2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 OR2W5A6NFC9 320 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 URADA6NGE7 173 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 KIF28PB7ZC32 967 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 H0Y626 953 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 J3KTA2 159 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 M0QZQ0 153 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 VILLO15195 856 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 PPM1DO15297 605 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 TNFSF14O43557 240 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 HTATSF1O43719 755 aaKnown RBP2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 BCAR3O75815 825 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 RPP40O75818 363 aaKnown RBP2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 PTMAP06454 111 aaKnown RBP2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 GJB1P08034 283 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 FGF2P09038 288 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 ACADMP11310 421 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 CPA1P15085 419 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 ZFXP17010 805 aaPredicted RBP2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 IFNAR1P17181 557 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 CHMP24386 653 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 PTGER1P34995 402 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 NDUFV1P49821 464 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 CLNS1AP54105 237 aaKnown RBP2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 ARF3P61204 181 aaPredicted RBP2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 RPS3AP61247 264 aaKnown RBP2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 TUBA4AP68366 448 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 UBXN2AP68543 259 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 ARF1P84077 181 aaKnown RBP2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 ZNF844Q08AG5 666 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 LRMPQ12912 555 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 PTP4A2Q12974 167 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 STK4Q13043 487 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 TUBB3Q13509 450 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 WTAPQ15007 396 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 PPP2R5BQ15173 497 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 PPA1Q15181 289 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 KYNUQ16719 465 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 RBM20Q5T481 1227 aaKnown RBP2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 MEX3CQ5U5Q3 659 aaKnown RBP2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 MANEALQ5VSG8 457 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 RUSC1-AS1Q66K80 236 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 SHQ1Q6PI26 577 aaKnown RBP2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 FAM180AQ6UWF9 173 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 SUSD1Q6UWL2 747 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 SLC30A10Q6XR72 485 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 GADL1Q6ZQY3 521 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 IKBIPQ70UQ0 350 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 MCM10Q7L590 875 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 NUP54Q7Z3B4 507 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 PIWIL3Q7Z3Z3 882 aaKnown RBP2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 IRF2BP2Q7Z5L9 587 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 CPLX4Q7Z7G2 160 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 DTX2Q86UW9 622 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 IQCA1Q86XH1 822 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 PDSS2Q86YH6 399 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 LMNTD2Q8IXW0 634 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 SAMD14Q8IZD0 417 aaPredicted RBP2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 OR8H3Q8N146 312 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 MPP5Q8N3R9 675 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 SRBD1Q8N5C6 995 aaKnown RBP2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 TMEM57Q8N5G2 664 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 LSM14AQ8ND56 463 aaKnown RBP2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 METTL6Q8TCB7 284 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 AFAP1L1Q8TED9 768 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms