RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 BEST1O76090 585 aa12.38□□□□□ -0.43
CAPRIN1-202ENST00000389645 HSPA4LO95757 839 aa12.38□□□□□ -0.43
CAPRIN1-202ENST00000389645 MOCS2O96007 188 aaPredicted RBP12.38□□□□□ -0.43
CAPRIN1-202ENST00000389645 CD4P01730 458 aa12.38□□□□□ -0.43
CAPRIN1-202ENST00000389645 DLDP09622 509 aaKnown RBP12.38□□□□□ -0.43
CAPRIN1-202ENST00000389645 TPBGLP0DKB5 382 aa12.38□□□□□ -0.43
CAPRIN1-202ENST00000389645 TKTP29401 623 aaKnown RBP12.38□□□□□ -0.43
CAPRIN1-202ENST00000389645 CLCNKBP51801 687 aa12.38□□□□□ -0.43
CAPRIN1-202ENST00000389645 NEK3P51956 506 aa12.38□□□□□ -0.43
CAPRIN1-202ENST00000389645 SLC18A1P54219 525 aa12.38□□□□□ -0.43
CAPRIN1-202ENST00000389645 PEX6Q13608 980 aa12.38□□□□□ -0.43
CAPRIN1-202ENST00000389645 SNX30Q5VWJ9 437 aa12.38□□□□□ -0.43
CAPRIN1-202ENST00000389645 C4orf50Q6ZRC1 276 aa12.38□□□□□ -0.43
CAPRIN1-202ENST00000389645 OSTM1Q86WC4 334 aa12.38□□□□□ -0.43
CAPRIN1-202ENST00000389645 B3GALNT2Q8NCR0 500 aa12.38□□□□□ -0.43
CAPRIN1-202ENST00000389645 FBXO27Q8NI29 283 aa12.38□□□□□ -0.43
CAPRIN1-202ENST00000389645 SPATA13Q96N96 652 aa12.38□□□□□ -0.43
CAPRIN1-202ENST00000389645 KCNK16Q96T55 309 aa12.38□□□□□ -0.43
CAPRIN1-202ENST00000389645 ULBP1Q9BZM6 244 aa12.38□□□□□ -0.43
CAPRIN1-202ENST00000389645 ARHGEF4Q9NR80 690 aa12.38□□□□□ -0.43
CAPRIN1-202ENST00000389645 BFARQ9NZS9 450 aa12.38□□□□□ -0.43
CAPRIN1-202ENST00000389645 LAMA3Q16787 3333 aa12.37□□□□□ -0.43
CAPRIN1-202ENST00000389645 GOLGA8QA0A0J9YX86 632 aa12.37□□□□□ -0.43
CAPRIN1-202ENST00000389645 GOLGA8OA6NCC3 632 aa12.37□□□□□ -0.43
CAPRIN1-202ENST00000389645 ARL5CA6NH57 179 aa12.37□□□□□ -0.43
CAPRIN1-202ENST00000389645 GOLGA8NF8WBI6 632 aa12.37□□□□□ -0.43
CAPRIN1-202ENST00000389645 NVLO15381 856 aaKnown RBP12.37□□□□□ -0.43
CAPRIN1-202ENST00000389645 STAU1O95793 577 aaKnown RBP12.37□□□□□ -0.43
CAPRIN1-202ENST00000389645 AVPR1AP37288 418 aa12.37□□□□□ -0.43
CAPRIN1-202ENST00000389645 MRPS5P82675 430 aaKnown RBP12.37□□□□□ -0.43
CAPRIN1-202ENST00000389645 SLC25A3Q00325 362 aa12.37□□□□□ -0.43
CAPRIN1-202ENST00000389645 ACSBG2Q5FVE4 666 aa12.37□□□□□ -0.43
CAPRIN1-202ENST00000389645 NCBP2-AS2Q69YL0 99 aa12.37□□□□□ -0.43
CAPRIN1-202ENST00000389645 C3orf58Q8NDZ4 430 aa12.37□□□□□ -0.43
CAPRIN1-202ENST00000389645 KHSRPQ92945 711 aaKnown RBP eCLIP12.37□□□□□ -0.438e-7■■■■□ 19.5
CAPRIN1-202ENST00000389645 TSNARE1Q96NA8 513 aa12.37□□□□□ -0.43
CAPRIN1-202ENST00000389645 ADAM2Q99965 735 aa12.37□□□□□ -0.43
CAPRIN1-202ENST00000389645 TUBB6Q9BUF5 446 aa12.37□□□□□ -0.43
CAPRIN1-202ENST00000389645 DCLRE1BQ9H816 532 aa12.37□□□□□ -0.43
CAPRIN1-202ENST00000389645 SAR1AQ9NR31 198 aa12.37□□□□□ -0.43
CAPRIN1-202ENST00000389645 NUP205Q92621 2012 aa12.37□□□□□ -0.43
CAPRIN1-202ENST00000389645 DFFAO00273 331 aa12.37□□□□□ -0.43
CAPRIN1-202ENST00000389645 MDM4O15151 490 aa12.37□□□□□ -0.43
CAPRIN1-202ENST00000389645 INHAP05111 366 aa12.37□□□□□ -0.43
CAPRIN1-202ENST00000389645 ETV4P43268 484 aa12.37□□□□□ -0.43
CAPRIN1-202ENST00000389645 MGAT3Q09327 533 aa12.37□□□□□ -0.43
CAPRIN1-202ENST00000389645 LPIN1Q14693 890 aa12.37□□□□□ -0.43
CAPRIN1-202ENST00000389645 TAZQ16635 292 aa12.37□□□□□ -0.43
CAPRIN1-202ENST00000389645 XKR4Q5GH76 650 aa12.37□□□□□ -0.43
CAPRIN1-202ENST00000389645 SLC9A4Q6AI14 798 aa12.37□□□□□ -0.43
CAPRIN1-202ENST00000389645 RNF180Q86T96 592 aa12.37□□□□□ -0.43
CAPRIN1-202ENST00000389645 DHRS4Q9BTZ2 278 aa12.37□□□□□ -0.43
CAPRIN1-202ENST00000389645 DDX43Q9NXZ2 648 aaKnown RBP12.37□□□□□ -0.43
CAPRIN1-202ENST00000389645 TRDMT1O14717 391 aaKnown RBP12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 ITM2AO43736 263 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 COQ9O75208 318 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 ATP6V1G1O75348 118 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 JCHAINP01591 159 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 POLBP06746 335 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 SETSIPP0DME0 302 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 SERPINB6P35237 376 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 ABL2P42684 1182 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 SLC18A2Q05940 514 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 PDK1Q15118 436 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 DLG2Q15700 870 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 SLC26A9Q7LBE3 791 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 STRA8Q7Z7C7 330 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 TREML1Q86YW5 311 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 RBM15BQ8NDT2 890 aaKnown RBP12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 SH3TC2Q8TF17 1288 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 TEKT4Q8WW24 435 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 PPP1R10Q96QC0 940 aaKnown RBP12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 FRMD8Q9BZ67 464 aaPredicted RBP12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 PHACTR1Q9C0D0 580 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 ATXN3LQ9H3M9 355 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 PNPOQ9NVS9 261 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 RHBDL2Q9NX52 303 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 PCDHA11Q9Y5I1 949 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 E9PBE3 544 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 F8W810 466 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 TXNDC9O14530 226 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 KLHL41O60662 606 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 PDE5AO76074 875 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 FAM200BP0CF97 657 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 GARSP41250 739 aaKnown RBP12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 MATKP42679 507 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 SERPINB9P50453 376 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 APLP1P51693 650 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 LRRC23Q53EV4 343 aaPredicted RBP12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 IL31Q6EBC2 164 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 C10orf107Q8IVU9 208 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 PCSK9Q8NBP7 692 aaKnown RBP12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 SLC26A7Q8TE54 656 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 ZNF296Q8WUU4 475 aaPredicted RBP12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 MTBPQ96DY7 904 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 SGF29Q96ES7 293 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 C20orf27Q9GZN8 174 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 OCEL1Q9H607 264 aa12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 SSU72Q9NP77 194 aaKnown RBP12.36□□□□□ -0.43
CAPRIN1-202ENST00000389645 C20orf96Q9NUD7 363 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms