RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 USP28Q96RU2 1077 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 C7orf25Q9BPX7 421 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 UBXN6Q9BZV1 441 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 NIF3L1Q9GZT8 377 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 SYNDIG1Q9H7V2 258 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 FZD3Q9NPG1 666 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 ABCC13Q9NSE7 274 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 KLHL11Q9NVR0 708 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 SEPT3Q9UH03 358 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 ENTPD2Q9Y5L3 495 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 HECTD1Q9ULT8 2610 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 ATMQ13315 3056 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 NEMP2A6NFY4 417 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 YJEFN3A6XGL0 299 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 C10orf142B7Z368 130 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 E7ENQ6 273 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 PIK3R2O00459 728 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 EFSO43281 561 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 PLRG1O43660 514 aaKnown RBP9.97□□□□□ -0.81
IFT88-203ENST00000389373 BNIP3LO60238 219 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 RNGTTO60942 597 aaKnown RBP9.97□□□□□ -0.81
IFT88-203ENST00000389373 GJB6O95452 261 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 GP1BAP07359 652 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 TRIM49P0CI25 452 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 TRIM49CP0CI26 452 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 GIMD1P0DJR0 217 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 LCP1P13796 627 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 NUDT1P36639 197 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 AFMP43652 599 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 GCLMP48507 274 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 VAMP7P51809 220 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 TBX4P57082 545 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 SLC39A14Q15043 492 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 STK38Q15208 465 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 E2F4Q16254 413 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 GOLGA7BQ2TAP0 167 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 FAM133BQ5BKY9 247 aaKnown RBP9.97□□□□□ -0.81
IFT88-203ENST00000389373 NADSYN1Q6IA69 706 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 BHLHA9Q7RTU4 235 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 EFL1Q7Z2Z2 1120 aaKnown RBP9.97□□□□□ -0.81
IFT88-203ENST00000389373 JAMLQ86YT9 394 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 SIX6OS1Q8N1H7 587 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 IQUBQ8NA54 791 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 ANKRD52Q8NB46 1076 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 KDM1BQ8NB78 822 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 SLC4A11Q8NBS3 891 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 HJURPQ8NCD3 748 aaPredicted RBP9.97□□□□□ -0.81
IFT88-203ENST00000389373 OR13H1Q8NG92 308 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 UBA3Q8TBC4 463 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 TAS1R2Q8TE23 839 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 MYEOVQ96EZ4 313 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 PRR11Q96HE9 360 aaPredicted RBP9.97□□□□□ -0.81
IFT88-203ENST00000389373 PRICKLE1Q96MT3 831 aaPredicted RBP9.97□□□□□ -0.81
IFT88-203ENST00000389373 DDX50Q9BQ39 737 aaKnown RBP9.97□□□□□ -0.81
IFT88-203ENST00000389373 KDM4CQ9H3R0 1056 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 CUEDC2Q9H467 287 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 DMAC2Q9NW81 257 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 DNAJC28Q9NX36 388 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 NLGN3Q9NZ94 848 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 SARDHQ9UL12 918 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 FRMD4BQ9Y2L6 1034 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 SSUH2Q9Y2M2 353 aa9.97□□□□□ -0.81
IFT88-203ENST00000389373 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.96□□□□□ -0.82
IFT88-203ENST00000389373 CDRT15L2A8MXV6 281 aa9.96□□□□□ -0.82
IFT88-203ENST00000389373 K7ESM1 405 aa9.96□□□□□ -0.82
IFT88-203ENST00000389373 IKBKBO14920 756 aa9.96□□□□□ -0.82
IFT88-203ENST00000389373 XPO1O14980 1071 aaKnown RBP9.96□□□□□ -0.82
IFT88-203ENST00000389373 IRAK2O43187 625 aa9.96□□□□□ -0.82
IFT88-203ENST00000389373 SUV39H1O43463 412 aa9.96□□□□□ -0.82
IFT88-203ENST00000389373 MOCS2O96007 188 aaPredicted RBP9.96□□□□□ -0.82
IFT88-203ENST00000389373 AFPP02771 609 aaKnown RBP9.96□□□□□ -0.82
IFT88-203ENST00000389373 NR3C1P04150 777 aa9.96□□□□□ -0.82
IFT88-203ENST00000389373 FAM87AP0C7U9 286 aa9.96□□□□□ -0.82
IFT88-203ENST00000389373 GP1BBP13224 206 aa9.96□□□□□ -0.82
IFT88-203ENST00000389373 AKT2P31751 481 aa9.96□□□□□ -0.82
IFT88-203ENST00000389373 RAD23BP54727 409 aa9.96□□□□□ -0.82
IFT88-203ENST00000389373 CLDN2P57739 230 aa9.96□□□□□ -0.82
IFT88-203ENST00000389373 NUCB2P80303 420 aa9.96□□□□□ -0.82
IFT88-203ENST00000389373 SKOR1P84550 965 aa9.96□□□□□ -0.82
IFT88-203ENST00000389373 CNTN1Q12860 1018 aa9.96□□□□□ -0.82
IFT88-203ENST00000389373 ZNF177Q13360 481 aaPredicted RBP9.96□□□□□ -0.82
IFT88-203ENST00000389373 UBAP2LQ14157 1087 aaKnown RBP9.96□□□□□ -0.82
IFT88-203ENST00000389373 ELAVL3Q14576 367 aaKnown RBP9.96□□□□□ -0.82
IFT88-203ENST00000389373 ARID5BQ14865 1188 aa9.96□□□□□ -0.82
IFT88-203ENST00000389373 DCAF6Q58WW2 860 aa9.96□□□□□ -0.82
IFT88-203ENST00000389373 C1orf220Q5T0J3 134 aa9.96□□□□□ -0.82
IFT88-203ENST00000389373 FAM46CQ5VWP2 391 aa9.96□□□□□ -0.82
IFT88-203ENST00000389373 NUGGCQ68CJ6 796 aa9.96□□□□□ -0.82
IFT88-203ENST00000389373 GUSBP11Q6P575 273 aa9.96□□□□□ -0.82
IFT88-203ENST00000389373 IGF2-ASQ6U949 168 aa9.96□□□□□ -0.82
IFT88-203ENST00000389373 RBM44Q6ZP01 1051 aaKnown RBP9.96□□□□□ -0.82
IFT88-203ENST00000389373 DSG4Q86SJ6 1040 aa9.96□□□□□ -0.82
IFT88-203ENST00000389373 TRIM69Q86WT6 500 aa9.96□□□□□ -0.82
IFT88-203ENST00000389373 OR8D1Q8WZ84 308 aa9.96□□□□□ -0.82
IFT88-203ENST00000389373 NOX5Q96PH1 765 aa9.96□□□□□ -0.82
IFT88-203ENST00000389373 DUSP23Q9BVJ7 150 aa9.96□□□□□ -0.82
IFT88-203ENST00000389373 BACH2Q9BYV9 841 aa9.96□□□□□ -0.82
IFT88-203ENST00000389373 CISHQ9NSE2 258 aa9.96□□□□□ -0.82
IFT88-203ENST00000389373 STARD5Q9NSY2 213 aa9.96□□□□□ -0.82
IFT88-203ENST00000389373 HESX1Q9UBX0 185 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms