RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 CGB2Q6NT52 195 aa13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 GLMNQ92990 594 aa13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 P2RX7Q99572 595 aaKnown RBP13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 C17orf80Q9BSJ5 609 aa13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 PRDM12Q9H4Q4 367 aa13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 PLGRKTQ9HBL7 147 aa13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 ERAP1Q9NZ08 941 aa13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 SLC17A6Q9P2U8 582 aa13.4□□□□□ -0.26
TRAPPC9-201ENST00000389328 PLIN4Q96Q06 1357 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 PAPSS1O43252 624 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 PARNO95453 639 aaKnown RBP13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 TOP3BO95985 862 aaKnown RBP13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 KRT8P05787 483 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 PGK2P07205 417 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 CCDC130P13994 396 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 BAG6P46379 1132 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 MICALL2Q8IY33 904 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 RIN3Q8TB24 985 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 MAGEE2Q8TD90 523 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 SCHIP1Q9P0W5 487 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 PRPF19Q9UMS4 504 aaKnown RBP13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 ACKR2O00590 384 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 TRIM38O00635 465 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 ZNF862O60290 1169 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 PLIN3O60664 434 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 DLDP09622 509 aaKnown RBP13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 T-ENOLP0DO92 83 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 IL1R2P27930 398 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 SFT2D3Q587I9 215 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 TRIM74Q86UV6 250 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 TRIM73Q86UV7 250 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 CROCCP3Q8IVE0 287 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 CASP10Q92851 521 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.39□□□□□ -0.274e-7■■■■■ 67.9
TRAPPC9-201ENST00000389328 PLEKHG4BQ96PX9 1271 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 UBE2OQ9C0C9 1292 aaKnown RBP13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 TMEM216Q9P0N5 145 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 TJP2Q9UDY2 1190 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 RAP2CQ9Y3L5 183 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 ZNF536O15090 1300 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 RGL2O15211 777 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 ANXA9O76027 345 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 GJB1P08034 283 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 IDH3AP50213 366 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 ADIGQ0VDE8 80 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 LAMC2Q13753 1193 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 TAS2R42Q7RTR8 314 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 FAM162AQ96A26 154 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 CCDC126Q96EE4 140 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 RNF145Q96MT1 663 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 NOL11Q9H8H0 719 aaKnown RBP13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 NR2E3Q9Y5X4 410 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 C19orf81C9J6K1 198 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 PTGES3LE9PB15 166 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 ITM2AO43736 263 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 GAS2O43903 313 aaKnown RBP13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 ATP6V1G1O75348 118 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 RALGDSQ12967 914 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 ZIK1Q3SY52 487 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 SLC41A1Q8IVJ1 513 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 ZNF781Q8N8C0 355 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 KLHL23Q8NBE8 558 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 ADCY4Q8NFM4 1077 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 DENND1AQ8TEH3 1009 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 ZFAND2BQ8WV99 257 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 SLC25A23Q9BV35 468 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 PTTG2Q9NZH5 202 aa13.39□□□□□ -0.27
TRAPPC9-201ENST00000389328 OR6B1O95007 311 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 C2P06681 752 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 GM2AP17900 193 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 CHRNB3Q05901 458 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 BST2Q10589 180 aaKnown RBP13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 CDH17Q12864 832 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 ZNF235Q14590 738 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 SGO1Q5FBB7 561 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 SH3PXD2AQ5TCZ1 1133 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 EEF1DP3Q658K8 133 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 ZNF772Q68DY9 489 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 STK32CQ86UX6 486 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 XYLT1Q86Y38 959 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 DDX1Q92499 740 aaKnown RBP13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 BTBD9Q96Q07 612 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 DGCR6LQ9BY27 220 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 B3GNT5Q9BYG0 378 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 BRD8Q9H0E9 1235 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 ZNF358Q9NW07 568 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 TDRKHQ9Y2W6 561 aaKnown RBP13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 LAMA4Q16363 1823 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 MYH7P12883 1935 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 TIPRLO75663 272 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 DLGAP3O95886 979 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 CD151P48509 253 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 OGDHQ02218 1023 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 GTF2H3Q13889 308 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 NADK2Q4G0N4 442 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 ERO1BQ86YB8 467 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 CAMK1DQ8IU85 385 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 UNC5BQ8IZJ1 945 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 B4GALT5O43286 388 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 BNIP3LO60238 219 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms