RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 RAD9BQ6WBX8 426 aa19.94■□□□□ 0.78
GTF3A-201ENST00000381140 CCDC170Q8IYT3 715 aa19.94■□□□□ 0.78
GTF3A-201ENST00000381140 TBC1D31Q96DN5 1066 aa19.94■□□□□ 0.78
GTF3A-201ENST00000381140 SNRNP25Q9BV90 132 aaKnown RBP19.94■□□□□ 0.78
GTF3A-201ENST00000381140 MUC3BQ9H195 1237 aa19.94■□□□□ 0.78
GTF3A-201ENST00000381140 DHX35Q9H5Z1 703 aaKnown RBP19.94■□□□□ 0.78
GTF3A-201ENST00000381140 POLMQ9NP87 494 aaPredicted RBP19.94■□□□□ 0.78
GTF3A-201ENST00000381140 KCND1Q9NSA2 647 aa19.94■□□□□ 0.78
GTF3A-201ENST00000381140 ZSCAN32Q9NX65 697 aa19.94■□□□□ 0.78
GTF3A-201ENST00000381140 BCCIPQ9P287 314 aaKnown RBP eCLIP19.94■□□□□ 0.78
GTF3A-201ENST00000381140 AP4E1Q9UPM8 1137 aa19.94■□□□□ 0.78
GTF3A-201ENST00000381140 TCRBV21S2A2A0A5A6 115 aa19.93■□□□□ 0.78
GTF3A-201ENST00000381140 DLDP09622 509 aaKnown RBP19.93■□□□□ 0.78
GTF3A-201ENST00000381140 HLA-EP13747 358 aa19.93■□□□□ 0.78
GTF3A-201ENST00000381140 PRKCHP24723 683 aa19.93■□□□□ 0.78
GTF3A-201ENST00000381140 OR1E1P30953 314 aa19.93■□□□□ 0.78
GTF3A-201ENST00000381140 CTSOP43234 321 aaPredicted RBP19.93■□□□□ 0.78
GTF3A-201ENST00000381140 MAGEA1P43355 309 aa19.93■□□□□ 0.78
GTF3A-201ENST00000381140 DGKEP52429 567 aa19.93■□□□□ 0.78
GTF3A-201ENST00000381140 NRLP54845 237 aa19.93■□□□□ 0.78
GTF3A-201ENST00000381140 OXCT1P55809 520 aa19.93■□□□□ 0.78
GTF3A-201ENST00000381140 NHLH1Q02575 133 aa19.93■□□□□ 0.78
GTF3A-201ENST00000381140 SPA17Q15506 151 aa19.93■□□□□ 0.78
GTF3A-201ENST00000381140 PGBD3Q8N328 593 aa19.93■□□□□ 0.78
GTF3A-201ENST00000381140 ZNF366Q8N895 744 aa19.93■□□□□ 0.78
GTF3A-201ENST00000381140 HMGB4Q8WW32 186 aa19.93■□□□□ 0.78
GTF3A-201ENST00000381140 ATRIPQ8WXE1 791 aa19.93■□□□□ 0.78
GTF3A-201ENST00000381140 ZWILCHQ9H900 591 aa19.93■□□□□ 0.78
GTF3A-201ENST00000381140 OSGEPQ9NPF4 335 aa19.93■□□□□ 0.78
GTF3A-201ENST00000381140 UVRAGQ9P2Y5 699 aa19.93■□□□□ 0.78
GTF3A-201ENST00000381140 PPARGC1AQ9UBK2 798 aaKnown RBP19.93■□□□□ 0.78
GTF3A-201ENST00000381140 VPS28Q9UK41 221 aa19.93■□□□□ 0.78
GTF3A-201ENST00000381140 USP18Q9UMW8 372 aa19.93■□□□□ 0.78
GTF3A-201ENST00000381140 TCF4P15884 667 aa19.92■□□□□ 0.78
GTF3A-201ENST00000381140 L1CAMP32004 1257 aa19.92■□□□□ 0.78
GTF3A-201ENST00000381140 GJC1P36383 396 aa19.92■□□□□ 0.78
GTF3A-201ENST00000381140 AIF1P55008 147 aa19.92■□□□□ 0.78
GTF3A-201ENST00000381140 ST8SIA6P61647 398 aa19.92■□□□□ 0.78
GTF3A-201ENST00000381140 NRG1Q02297 640 aaPredicted RBP19.92■□□□□ 0.78
GTF3A-201ENST00000381140 STARD3Q14849 445 aa19.92■□□□□ 0.78
GTF3A-201ENST00000381140 ACAP1Q15027 740 aa19.92■□□□□ 0.78
GTF3A-201ENST00000381140 E2F5Q15329 346 aa19.92■□□□□ 0.78
GTF3A-201ENST00000381140 CA9Q16790 459 aa19.92■□□□□ 0.78
GTF3A-201ENST00000381140 SMTNL2Q2TAL5 461 aa19.92■□□□□ 0.78
GTF3A-201ENST00000381140 ARTNQ5T4W7 220 aa19.92■□□□□ 0.78
GTF3A-201ENST00000381140 ERMARDQ5T6L9 678 aa19.92■□□□□ 0.78
GTF3A-201ENST00000381140 MANEALQ5VSG8 457 aa19.92■□□□□ 0.78
GTF3A-201ENST00000381140 KIAA1211LQ6NV74 962 aa19.92■□□□□ 0.78
GTF3A-201ENST00000381140 CAMKK1Q8N5S9 505 aa19.92■□□□□ 0.78
GTF3A-201ENST00000381140 SLC35G2Q8TBE7 412 aa19.92■□□□□ 0.78
GTF3A-201ENST00000381140 TTC17Q96AE7 1141 aa19.92■□□□□ 0.78
GTF3A-201ENST00000381140 EPAS1Q99814 870 aa19.92■□□□□ 0.78
GTF3A-201ENST00000381140 NCAPGQ9BPX3 1015 aa19.92■□□□□ 0.78
GTF3A-201ENST00000381140 FAM126AQ9BYI3 521 aaPredicted RBP19.92■□□□□ 0.78
GTF3A-201ENST00000381140 TPSD1Q9BZJ3 242 aa19.92■□□□□ 0.78
GTF3A-201ENST00000381140 TBC1D30Q9Y2I9 924 aa19.92■□□□□ 0.78
GTF3A-201ENST00000381140 SPAG17Q6Q759 2223 aa19.92■□□□□ 0.78
GTF3A-201ENST00000381140 CHD5Q8TDI0 1954 aa19.91■□□□□ 0.78
GTF3A-201ENST00000381140 NPC1O15118 1278 aa19.91■□□□□ 0.78
GTF3A-201ENST00000381140 AXIN1O15169 862 aa19.91■□□□□ 0.78
GTF3A-201ENST00000381140 ALDH1A2O94788 518 aa19.91■□□□□ 0.78
GTF3A-201ENST00000381140 ASLP04424 464 aa19.91■□□□□ 0.78
GTF3A-201ENST00000381140 EPHX1P07099 455 aa19.91■□□□□ 0.78
GTF3A-201ENST00000381140 EPHB2P29323 1055 aa19.91■□□□□ 0.78
GTF3A-201ENST00000381140 TPI1P60174 286 aa19.91■□□□□ 0.78
GTF3A-201ENST00000381140 SRSF5Q13243 272 aaKnown RBP19.91■□□□□ 0.78
GTF3A-201ENST00000381140 SLC12A1Q13621 1099 aa19.91■□□□□ 0.78
GTF3A-201ENST00000381140 MESDQ14696 234 aa19.91■□□□□ 0.78
GTF3A-201ENST00000381140 PTPRNQ16849 979 aa19.91■□□□□ 0.78
GTF3A-201ENST00000381140 PPP6R3Q5H9R7 873 aaPredicted RBP19.91■□□□□ 0.78
GTF3A-201ENST00000381140 C6orf118Q5T5N4 469 aa19.91■□□□□ 0.78
GTF3A-201ENST00000381140 ZC3H14Q6PJT7 736 aaKnown RBP19.91■□□□□ 0.78
GTF3A-201ENST00000381140 CPNE8Q86YQ8 564 aa19.91■□□□□ 0.78
GTF3A-201ENST00000381140 HSPH1Q92598 858 aa19.91■□□□□ 0.78
GTF3A-201ENST00000381140 RPL10LQ96L21 214 aaKnown RBP19.91■□□□□ 0.78
GTF3A-201ENST00000381140 GABRG3Q99928 467 aa19.91■□□□□ 0.78
GTF3A-201ENST00000381140 FEM1AQ9BSK4 669 aa19.91■□□□□ 0.78
GTF3A-201ENST00000381140 SPON2Q9BUD6 331 aa19.91■□□□□ 0.78
GTF3A-201ENST00000381140 DNAI1Q9UI46 699 aa19.91■□□□□ 0.78
GTF3A-201ENST00000381140 ERVW-1Q9UQF0 538 aa19.91■□□□□ 0.78
GTF3A-201ENST00000381140 A0A1W2PQF6 199 aa19.9■□□□□ 0.78
GTF3A-201ENST00000381140 ZBTB24O43167 697 aaPredicted RBP19.9■□□□□ 0.78
GTF3A-201ENST00000381140 SYNCRIPO60506 623 aaKnown RBP19.9■□□□□ 0.78
GTF3A-201ENST00000381140 IPO7O95373 1038 aaKnown RBP19.9■□□□□ 0.78
GTF3A-201ENST00000381140 RHOQP17081 205 aa19.9■□□□□ 0.78
GTF3A-201ENST00000381140 IL1R2P27930 398 aa19.9■□□□□ 0.78
GTF3A-201ENST00000381140 PCK1P35558 622 aa19.9■□□□□ 0.78
GTF3A-201ENST00000381140 STK19P49842 368 aaPredicted RBP19.9■□□□□ 0.78
GTF3A-201ENST00000381140 ECT2LQ008S8 904 aa19.9■□□□□ 0.78
GTF3A-201ENST00000381140 KCNT1Q5JUK3 1230 aa19.9■□□□□ 0.78
GTF3A-201ENST00000381140 CYP4V2Q6ZWL3 525 aaPredicted RBP19.9■□□□□ 0.78
GTF3A-201ENST00000381140 SETD3Q86TU7 594 aaPredicted RBP19.9■□□□□ 0.78
GTF3A-201ENST00000381140 LONP2Q86WA8 852 aa19.9■□□□□ 0.78
GTF3A-201ENST00000381140 NIPA2Q8N8Q9 360 aa19.9■□□□□ 0.78
GTF3A-201ENST00000381140 MDGA1Q8NFP4 955 aa19.9■□□□□ 0.78
GTF3A-201ENST00000381140 OR7D4Q8NG98 312 aa19.9■□□□□ 0.78
GTF3A-201ENST00000381140 KCTD15Q96SI1 283 aaPredicted RBP19.9■□□□□ 0.78
GTF3A-201ENST00000381140 PHOX2BQ99453 314 aa19.9■□□□□ 0.78
GTF3A-201ENST00000381140 MTG2Q9H4K7 406 aa19.9■□□□□ 0.78
GTF3A-201ENST00000381140 TFR2Q9UP52 801 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms