RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 KDM4CQ9H3R0 1056 aa16.53■□□□□ 0.24
VCX3A-201ENST00000381089 GOLPH3LQ9H4A5 285 aa16.53■□□□□ 0.24
VCX3A-201ENST00000381089 EBF2Q9HAK2 575 aa16.53■□□□□ 0.24
VCX3A-201ENST00000381089 ST7Q9NRC1 585 aa16.53■□□□□ 0.24
VCX3A-201ENST00000381089 SLC12A6Q9UHW9 1150 aa16.53■□□□□ 0.24
VCX3A-201ENST00000381089 SMC2O95347 1197 aa16.52■□□□□ 0.24
VCX3A-201ENST00000381089 BRD2P25440 801 aaKnown RBP16.52■□□□□ 0.24
VCX3A-201ENST00000381089 MZF1P28698 734 aaPredicted RBP16.52■□□□□ 0.24
VCX3A-201ENST00000381089 EIF2S3P41091 472 aaKnown RBP16.52■□□□□ 0.24
VCX3A-201ENST00000381089 CTSOP43234 321 aaPredicted RBP16.52■□□□□ 0.24
VCX3A-201ENST00000381089 RXRGP48443 463 aa16.52■□□□□ 0.24
VCX3A-201ENST00000381089 OXCT1P55809 520 aa16.52■□□□□ 0.24
VCX3A-201ENST00000381089 OVGP1Q12889 678 aa16.52■□□□□ 0.24
VCX3A-201ENST00000381089 PNOCQ13519 176 aa16.52■□□□□ 0.24
VCX3A-201ENST00000381089 SHBQ15464 509 aa16.52■□□□□ 0.24
VCX3A-201ENST00000381089 HS1BP3Q53T59 392 aa16.52■□□□□ 0.24
VCX3A-201ENST00000381089 FAM46CQ5VWP2 391 aa16.52■□□□□ 0.24
VCX3A-201ENST00000381089 ANKRD40Q6AI12 368 aa16.52■□□□□ 0.24
VCX3A-201ENST00000381089 BEND5Q7L4P6 421 aa16.52■□□□□ 0.24
VCX3A-201ENST00000381089 AADATQ8N5Z0 425 aa16.52■□□□□ 0.24
VCX3A-201ENST00000381089 MFSD2AQ8NA29 543 aa16.52■□□□□ 0.24
VCX3A-201ENST00000381089 SLC39A13Q96H72 371 aa16.52■□□□□ 0.24
VCX3A-201ENST00000381089 CRELD1Q96HD1 420 aa16.52■□□□□ 0.24
VCX3A-201ENST00000381089 BTN2A3PQ96KV6 586 aa16.52■□□□□ 0.24
VCX3A-201ENST00000381089 SPAG5Q96R06 1193 aa16.52■□□□□ 0.24
VCX3A-201ENST00000381089 PPP1R9BQ96SB3 815 aa16.52■□□□□ 0.24
VCX3A-201ENST00000381089 FAM129BQ96TA1 746 aa16.52■□□□□ 0.24
VCX3A-201ENST00000381089 SLCO3A1Q9UIG8 710 aa16.52■□□□□ 0.24
VCX3A-201ENST00000381089 NAALADL1Q9UQQ1 740 aa16.52■□□□□ 0.24
VCX3A-201ENST00000381089 DMTF1Q9Y222 760 aa16.52■□□□□ 0.24
VCX3A-201ENST00000381089 F5H5T6 163 aa16.51■□□□□ 0.23
VCX3A-201ENST00000381089 CBX4O00257 560 aa16.51■□□□□ 0.23
VCX3A-201ENST00000381089 PMM2O15305 246 aa16.51■□□□□ 0.23
VCX3A-201ENST00000381089 SLC7A4O43246 635 aa16.51■□□□□ 0.23
VCX3A-201ENST00000381089 LATO43561 262 aa16.51■□□□□ 0.23
VCX3A-201ENST00000381089 GABBR2O75899 941 aa16.51■□□□□ 0.23
VCX3A-201ENST00000381089 CKMT2P17540 419 aa16.51■□□□□ 0.23
VCX3A-201ENST00000381089 STAT4Q14765 748 aa16.51■□□□□ 0.23
VCX3A-201ENST00000381089 RTP5Q14D33 572 aa16.51■□□□□ 0.23
VCX3A-201ENST00000381089 CCDC40Q4G0X9 1142 aa16.51■□□□□ 0.23
VCX3A-201ENST00000381089 TTC39BQ5VTQ0 682 aaPredicted RBP16.51■□□□□ 0.23
VCX3A-201ENST00000381089 RAP1GAP2Q684P5 730 aa16.51■□□□□ 0.23
VCX3A-201ENST00000381089 FBXL19Q6PCT2 694 aa16.51■□□□□ 0.23
VCX3A-201ENST00000381089 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.51■□□□□ 0.23
VCX3A-201ENST00000381089 IQCHQ86VS3 1027 aa16.51■□□□□ 0.23
VCX3A-201ENST00000381089 ADAM32Q8TC27 787 aa16.51■□□□□ 0.23
VCX3A-201ENST00000381089 TSC1Q92574 1164 aa16.51■□□□□ 0.23
VCX3A-201ENST00000381089 PTPRN2Q92932 1015 aa16.51■□□□□ 0.23
VCX3A-201ENST00000381089 RPL10LQ96L21 214 aaKnown RBP16.51■□□□□ 0.23
VCX3A-201ENST00000381089 HOOK1Q9UJC3 728 aaKnown RBP16.51■□□□□ 0.23
VCX3A-201ENST00000381089 ZDHHC9Q9Y397 364 aa16.51■□□□□ 0.23
VCX3A-201ENST00000381089 PSMA7O14818 248 aa16.5■□□□□ 0.23
VCX3A-201ENST00000381089 P4HA2O15460 535 aa16.5■□□□□ 0.23
VCX3A-201ENST00000381089 FYNP06241 537 aa16.5■□□□□ 0.23
VCX3A-201ENST00000381089 TACR2P21452 398 aa16.5■□□□□ 0.23
VCX3A-201ENST00000381089 RABGAP1LQ5R372 815 aa16.5■□□□□ 0.23
VCX3A-201ENST00000381089 TAC4Q86UU9 113 aa16.5■□□□□ 0.23
VCX3A-201ENST00000381089 APCDD1Q8J025 514 aa16.5■□□□□ 0.23
VCX3A-201ENST00000381089 CACTIN-AS1Q8N1I8 211 aa16.5■□□□□ 0.23
VCX3A-201ENST00000381089 ATP6V0D2Q8N8Y2 350 aa16.5■□□□□ 0.23
VCX3A-201ENST00000381089 LSM14AQ8ND56 463 aaKnown RBP16.5■□□□□ 0.23
VCX3A-201ENST00000381089 OR8D1Q8WZ84 308 aa16.5■□□□□ 0.23
VCX3A-201ENST00000381089 SLC39A7Q92504 469 aa16.5■□□□□ 0.23
VCX3A-201ENST00000381089 MYEOVQ96EZ4 313 aa16.5■□□□□ 0.23
VCX3A-201ENST00000381089 MED15Q96RN5 788 aa16.5■□□□□ 0.23
VCX3A-201ENST00000381089 SLC25A13Q9UJS0 675 aa16.5■□□□□ 0.23
VCX3A-201ENST00000381089 SHROOM3Q8TF72 1996 aa16.49■□□□□ 0.23
VCX3A-201ENST00000381089 GOLGA6L4A6NEF3 574 aa16.49■□□□□ 0.23
VCX3A-201ENST00000381089 C10orf142B7Z368 130 aa16.49■□□□□ 0.23
VCX3A-201ENST00000381089 C1QTNF3-AMACRE9PGA6 284 aa16.49■□□□□ 0.23
VCX3A-201ENST00000381089 RNF225M0QZC1 329 aaPredicted RBP16.49■□□□□ 0.23
VCX3A-201ENST00000381089 WNT9AO14904 365 aa16.49■□□□□ 0.23
VCX3A-201ENST00000381089 MED7O43513 233 aa16.49■□□□□ 0.23
VCX3A-201ENST00000381089 SLC2A3P11169 496 aa16.49■□□□□ 0.23
VCX3A-201ENST00000381089 PDGFRAP16234 1089 aa16.49■□□□□ 0.23
VCX3A-201ENST00000381089 GLDCP23378 1020 aa16.49■□□□□ 0.23
VCX3A-201ENST00000381089 ITPKBP27987 946 aa16.49■□□□□ 0.23
VCX3A-201ENST00000381089 ACTN2P35609 894 aa16.49■□□□□ 0.23
VCX3A-201ENST00000381089 PPP1R2P41236 205 aa16.49■□□□□ 0.23
VCX3A-201ENST00000381089 STK19P49842 368 aaPredicted RBP16.49■□□□□ 0.23
VCX3A-201ENST00000381089 PMS1P54277 932 aaKnown RBP16.49■□□□□ 0.23
VCX3A-201ENST00000381089 CLDN6P56747 220 aa16.49■□□□□ 0.23
VCX3A-201ENST00000381089 PPP2CBP62714 309 aa16.49■□□□□ 0.23
VCX3A-201ENST00000381089 PPP2CAP67775 309 aa16.49■□□□□ 0.23
VCX3A-201ENST00000381089 E2F1Q01094 437 aa16.49■□□□□ 0.23
VCX3A-201ENST00000381089 GCNT1Q02742 428 aa16.49■□□□□ 0.23
VCX3A-201ENST00000381089 BNIP3Q12983 259 aa16.49■□□□□ 0.23
VCX3A-201ENST00000381089 ACCSLQ4AC99 568 aa16.49■□□□□ 0.23
VCX3A-201ENST00000381089 SETMARQ53H47 684 aaPredicted RBP16.49■□□□□ 0.23
VCX3A-201ENST00000381089 ZC3H12AQ5D1E8 599 aaKnown RBP16.49■□□□□ 0.23
VCX3A-201ENST00000381089 SFMBT2Q5VUG0 894 aa16.49■□□□□ 0.23
VCX3A-201ENST00000381089 SNIP1Q8TAD8 396 aaKnown RBP16.49■□□□□ 0.23
VCX3A-201ENST00000381089 FGF11Q92914 225 aa16.49■□□□□ 0.23
VCX3A-201ENST00000381089 SMARCE1Q969G3 411 aa16.49■□□□□ 0.23
VCX3A-201ENST00000381089 CEP63Q96MT8 703 aa16.49■□□□□ 0.23
VCX3A-201ENST00000381089 FCRL3Q96P31 734 aaPredicted RBP16.49■□□□□ 0.23
VCX3A-201ENST00000381089 ZSWIM1Q9BR11 485 aa16.49■□□□□ 0.23
VCX3A-201ENST00000381089 PRORYQ9H606 182 aa16.49■□□□□ 0.23
VCX3A-201ENST00000381089 POPDC2Q9HBU9 364 aa16.49■□□□□ 0.23
VCX3A-201ENST00000381089 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms