RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 ZNF438Q7Z4V0 828 aa16.33■□□□□ 0.21
COL2A1-202ENST00000380518 STK32CQ86UX6 486 aa16.33■□□□□ 0.21
COL2A1-202ENST00000380518 SLC9A9Q8IVB4 645 aa16.33■□□□□ 0.21
COL2A1-202ENST00000380518 GLIS3Q8NEA6 775 aa16.33■□□□□ 0.21
COL2A1-202ENST00000380518 DNAJC19Q96DA6 116 aa16.33■□□□□ 0.21
COL2A1-202ENST00000380518 ZFRQ96KR1 1074 aaKnown RBP16.33■□□□□ 0.21
COL2A1-202ENST00000380518 RNF145Q96MT1 663 aa16.33■□□□□ 0.21
COL2A1-202ENST00000380518 TRAPPC9Q96Q05 1148 aa16.33■□□□□ 0.21
COL2A1-202ENST00000380518 POMKQ9H5K3 350 aa16.33■□□□□ 0.21
COL2A1-202ENST00000380518 SMPD4Q9NXE4 827 aa16.33■□□□□ 0.21
COL2A1-202ENST00000380518 KLHL20Q9Y2M5 609 aa16.33■□□□□ 0.21
COL2A1-202ENST00000380518 PCDHB12Q9Y5F1 795 aa16.33■□□□□ 0.21
COL2A1-202ENST00000380518 LINC00854A0A1B0GVQ3 168 aa16.33■□□□□ 0.2
COL2A1-202ENST00000380518 TBKBP1A7MCY6 615 aa16.33■□□□□ 0.2
COL2A1-202ENST00000380518 PEX1O43933 1283 aa16.33■□□□□ 0.2
COL2A1-202ENST00000380518 PROCP04070 461 aa16.33■□□□□ 0.2
COL2A1-202ENST00000380518 WEE1P30291 646 aa16.33■□□□□ 0.2
COL2A1-202ENST00000380518 TALDO1P37837 337 aa16.33■□□□□ 0.2
COL2A1-202ENST00000380518 MMP13P45452 471 aa16.33■□□□□ 0.2
COL2A1-202ENST00000380518 BOP1Q14137 746 aaKnown RBP16.33■□□□□ 0.2
COL2A1-202ENST00000380518 DDR2Q16832 855 aa16.33■□□□□ 0.2
COL2A1-202ENST00000380518 PSTKQ8IV42 348 aaKnown RBP16.33■□□□□ 0.2
COL2A1-202ENST00000380518 PRCCQ92733 491 aaPredicted RBP16.33■□□□□ 0.2
COL2A1-202ENST00000380518 SEMA4DQ92854 862 aa16.33■□□□□ 0.2
COL2A1-202ENST00000380518 PGLYRP2Q96PD5 576 aa16.33■□□□□ 0.2
COL2A1-202ENST00000380518 POLR1EQ9GZS1 481 aaKnown RBP16.33■□□□□ 0.2
COL2A1-202ENST00000380518 CYP3A7-CYP3A51PA0A087WV96 503 aa16.33■□□□□ 0.2
COL2A1-202ENST00000380518 SRRM3A6NNA2 597 aaPredicted RBP16.33■□□□□ 0.2
COL2A1-202ENST00000380518 TBC1D12O60347 775 aa16.33■□□□□ 0.2
COL2A1-202ENST00000380518 FSBPO95073 299 aa16.33■□□□□ 0.2
COL2A1-202ENST00000380518 IGSF6O95976 241 aa16.33■□□□□ 0.2
COL2A1-202ENST00000380518 BCL10O95999 233 aa16.33■□□□□ 0.2
COL2A1-202ENST00000380518 CKBP12277 381 aa16.33■□□□□ 0.2
COL2A1-202ENST00000380518 CYP3A7P24462 503 aa16.33■□□□□ 0.2
COL2A1-202ENST00000380518 PSEN2P49810 448 aa16.33■□□□□ 0.2
COL2A1-202ENST00000380518 PLK1P53350 603 aa16.33■□□□□ 0.2
COL2A1-202ENST00000380518 RAB14P61106 215 aa16.33■□□□□ 0.2
COL2A1-202ENST00000380518 PURAQ00577 322 aaKnown RBP16.33■□□□□ 0.2
COL2A1-202ENST00000380518 MREGQ8N565 214 aa16.33■□□□□ 0.2
COL2A1-202ENST00000380518 DPP10Q8N608 796 aa16.33■□□□□ 0.2
COL2A1-202ENST00000380518 C9orf16Q9BUW7 83 aa16.33■□□□□ 0.2
COL2A1-202ENST00000380518 STK39Q9UEW8 545 aa16.33■□□□□ 0.2
COL2A1-202ENST00000380518 TSPAN3O60637 253 aa16.33■□□□□ 0.2
COL2A1-202ENST00000380518 USP17L7P0C7H9 530 aa16.33■□□□□ 0.2
COL2A1-202ENST00000380518 RPA3P35244 121 aaPredicted RBP16.33■□□□□ 0.2
COL2A1-202ENST00000380518 RXRGP48443 463 aa16.33■□□□□ 0.2
COL2A1-202ENST00000380518 TUFMP49411 452 aaKnown RBP16.33■□□□□ 0.2
COL2A1-202ENST00000380518 SERPINH1P50454 418 aaKnown RBP16.33■□□□□ 0.2
COL2A1-202ENST00000380518 DRG2P55039 364 aaKnown RBP16.33■□□□□ 0.2
COL2A1-202ENST00000380518 FAM228AQ86W67 206 aa16.33■□□□□ 0.2
COL2A1-202ENST00000380518 PIWIL2Q8TC59 973 aaKnown RBP16.33■□□□□ 0.2
COL2A1-202ENST00000380518 MED8Q96G25 268 aa16.33■□□□□ 0.2
COL2A1-202ENST00000380518 SENP8Q96LD8 212 aa16.33■□□□□ 0.2
COL2A1-202ENST00000380518 HSFY1Q96LI6 401 aa16.33■□□□□ 0.2
COL2A1-202ENST00000380518 XPNPEP3Q9NQH7 507 aa16.33■□□□□ 0.2
COL2A1-202ENST00000380518 SNX3O60493 162 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 UBA1P22314 1058 aaKnown RBP16.32■□□□□ 0.2
COL2A1-202ENST00000380518 ALDH9A1P49189 494 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 ZNF143P52747 638 aaPredicted RBP16.32■□□□□ 0.2
COL2A1-202ENST00000380518 ZNF662Q6ZS27 426 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 CDK20Q8IZL9 346 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 FUKQ8N0W3 1084 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 SERAC1Q96JX3 654 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 APOL4Q9BPW4 351 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 KLHL3Q9UH77 587 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 ADAM30Q9UKF2 790 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 DUSP12Q9UNI6 340 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 MYRFQ9Y2G1 1151 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 ADGRB1O14514 1584 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 ASTN1O14525 1302 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 PHGDHO43175 533 aaKnown RBP16.32■□□□□ 0.2
COL2A1-202ENST00000380518 WBP4O75554 376 aaKnown RBP16.32■□□□□ 0.2
COL2A1-202ENST00000380518 TSHRP16473 764 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 BDNFP23560 247 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 HOXA10P31260 410 aaPredicted RBP16.32■□□□□ 0.2
COL2A1-202ENST00000380518 AUHQ13825 339 aaKnown RBP16.32■□□□□ 0.2
COL2A1-202ENST00000380518 TTMPQ5BVD1 217 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 CYP2R1Q6VVX0 501 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 STK40Q8N2I9 435 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 ACTRT2Q8TDY3 377 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 SHC3Q92529 594 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 DLG3Q92796 817 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 MRPL9Q9BYD2 267 aaKnown RBP16.32■□□□□ 0.2
COL2A1-202ENST00000380518 ABCC13Q9NSE7 274 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 BCL9O00512 1426 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 NCANO14594 1321 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 UBXN8O00124 270 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 FGF10O15520 208 aaPredicted RBP16.32■□□□□ 0.2
COL2A1-202ENST00000380518 LIASO43766 372 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 FAM20BO75063 409 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 PTPN3P26045 913 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 PLCL1Q15111 1095 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 PCID2Q5JVF3 399 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 IQSEC1Q6DN90 963 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 BNIPLQ7Z465 357 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 ZFPM1Q8IX07 1006 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 DHRSXQ8N5I4 330 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 PTPRHQ9HD43 1115 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 TRPV2Q9Y5S1 764 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 LGALS2P05162 132 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms