RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 LAMB3Q13751 1172 aa15.21■□□□□ 0.03
PRNP-201ENST00000379440 NOMO2Q5JPE7 1267 aa15.21■□□□□ 0.03
PRNP-201ENST00000379440 C4orf50Q6ZRC1 276 aa15.21■□□□□ 0.03
PRNP-201ENST00000379440 ARHGAP36Q6ZRI8 547 aa15.21■□□□□ 0.03
PRNP-201ENST00000379440 COLGALT2Q8IYK4 626 aa15.21■□□□□ 0.03
PRNP-201ENST00000379440 MAGEC3Q8TD91 643 aa15.21■□□□□ 0.03
PRNP-201ENST00000379440 HDAC11Q96DB2 347 aa15.21■□□□□ 0.03
PRNP-201ENST00000379440 IQCGQ9H095 443 aaKnown RBP15.21■□□□□ 0.03
PRNP-201ENST00000379440 ECT2Q9H8V3 914 aa15.21■□□□□ 0.03
PRNP-201ENST00000379440 NMUR1Q9HB89 426 aa15.21■□□□□ 0.03
PRNP-201ENST00000379440 PCMTD2Q9NV79 361 aa15.21■□□□□ 0.03
PRNP-201ENST00000379440 TBC1D13Q9NVG8 400 aa15.21■□□□□ 0.03
PRNP-201ENST00000379440 UBP1Q9NZI7 540 aa15.21■□□□□ 0.03
PRNP-201ENST00000379440 IRAK2O43187 625 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 EOMESO95936 686 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 PGAM1P18669 254 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 NCALDP61601 193 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 DDR2Q16832 855 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 PLEKHG4Q58EX7 1191 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 C10orf82Q8WW14 230 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 APOL2Q9BQE5 337 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 MLPHQ9BV36 600 aaPredicted RBP15.2■□□□□ 0.02
PRNP-201ENST00000379440 MECRQ9BV79 373 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 ABCC13Q9NSE7 274 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 PSAT1Q9Y617 370 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 RAD54BQ9Y620 910 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 PTPRDP23468 1912 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 SHROOM3Q8TF72 1996 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 A0A1W2PQ45 241 aaPredicted RBP15.2■□□□□ 0.02
PRNP-201ENST00000379440 A0A1W2PQY0 241 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 JCHAINP01591 159 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 NFKB1P19838 968 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 MX2P20592 715 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 SERPINB4P48594 390 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 LHX8Q68G74 356 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 TBC1D1Q86TI0 1168 aaPredicted RBP15.2■□□□□ 0.02
PRNP-201ENST00000379440 USP33Q8TEY7 942 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 CAPNS2Q96L46 248 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 MYLK2Q9H1R3 596 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 OSER1Q9NX31 292 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 ARHGEF38Q9NXL2 777 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 NEU3Q9UQ49 428 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 CHKBQ9Y259 395 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 PLLPQ9Y342 182 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 USH1CQ9Y6N9 552 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 A0A1W2PQH9 124 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 PAGE1O75459 146 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 AP2A1O95782 977 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 ERVK-10P10266 1014 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 PAX3P23760 479 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 GRK4P32298 578 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 SERPINB6P35237 376 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 NIPAL4Q0D2K0 466 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 TEX44Q53QW1 395 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 CYS1Q717R9 158 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 KIRREL3Q8IZU9 778 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 NDUFAF2Q8N183 169 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 B3GALT6Q96L58 329 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 FCRL3Q96P31 734 aaPredicted RBP15.2■□□□□ 0.02
PRNP-201ENST00000379440 OSBPL2Q9H1P3 480 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 GPBP1L1Q9HC44 474 aaPredicted RBP15.2■□□□□ 0.02
PRNP-201ENST00000379440 STARD7Q9NQZ5 370 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 DCTN4Q9UJW0 460 aa15.2■□□□□ 0.02
PRNP-201ENST00000379440 COL4A4P53420 1690 aaPredicted RBP15.19■□□□□ 0.02
PRNP-201ENST00000379440 MOXD2PA6NHM9 499 aa15.19■□□□□ 0.02
PRNP-201ENST00000379440 DFFAO00273 331 aa15.19■□□□□ 0.02
PRNP-201ENST00000379440 ZSCAN9O15535 394 aaPredicted RBP15.19■□□□□ 0.02
PRNP-201ENST00000379440 F7P08709 466 aaPredicted RBP15.19■□□□□ 0.02
PRNP-201ENST00000379440 TPP2P29144 1249 aaPredicted RBP15.19■□□□□ 0.02
PRNP-201ENST00000379440 CCNFP41002 786 aa15.19■□□□□ 0.02
PRNP-201ENST00000379440 RANBP1P43487 201 aa15.19■□□□□ 0.02
PRNP-201ENST00000379440 FAM189BP81408 668 aa15.19■□□□□ 0.02
PRNP-201ENST00000379440 CHSY1Q86X52 802 aa15.19■□□□□ 0.02
PRNP-201ENST00000379440 GBP7Q8N8V2 638 aaPredicted RBP15.19■□□□□ 0.02
PRNP-201ENST00000379440 DNAAF3Q8N9W5 541 aa15.19■□□□□ 0.02
PRNP-201ENST00000379440 RFWD2Q8NHY2 731 aa15.19■□□□□ 0.02
PRNP-201ENST00000379440 ZSCAN18Q8TBC5 510 aaPredicted RBP15.19■□□□□ 0.02
PRNP-201ENST00000379440 GPR152Q8TDT2 470 aa15.19■□□□□ 0.02
PRNP-201ENST00000379440 MTBPQ96DY7 904 aa15.19■□□□□ 0.02
PRNP-201ENST00000379440 ZCWPW1Q9H0M4 648 aa15.19■□□□□ 0.02
PRNP-201ENST00000379440 NDFIP2Q9NV92 336 aa15.19■□□□□ 0.02
PRNP-201ENST00000379440 TRIM33Q9UPN9 1127 aa15.19■□□□□ 0.02
PRNP-201ENST00000379440 ARHGEF37A1IGU5 675 aa15.19■□□□□ 0.02
PRNP-201ENST00000379440 MOCS2O96007 188 aaPredicted RBP15.19■□□□□ 0.02
PRNP-201ENST00000379440 KCTD11Q693B1 232 aa15.19■□□□□ 0.02
PRNP-201ENST00000379440 PACS1Q6VY07 963 aa15.19■□□□□ 0.02
PRNP-201ENST00000379440 MARK2Q7KZI7 788 aaKnown RBP15.19■□□□□ 0.02
PRNP-201ENST00000379440 OTOP3Q7RTS5 596 aa15.19■□□□□ 0.02
PRNP-201ENST00000379440 URGCPQ8TCY9 931 aa15.19■□□□□ 0.02
PRNP-201ENST00000379440 ERP27Q96DN0 273 aa15.19■□□□□ 0.02
PRNP-201ENST00000379440 TSSK1BQ9BXA7 367 aa15.19■□□□□ 0.02
PRNP-201ENST00000379440 GBA3Q9H227 469 aa15.19■□□□□ 0.02
PRNP-201ENST00000379440 FRMPD3Q5JV73 1810 aa15.18■□□□□ 0.02
PRNP-201ENST00000379440 ARHGAP42A6NI28 874 aa15.18■□□□□ 0.02
PRNP-201ENST00000379440 TADA2AO75478 443 aa15.18■□□□□ 0.02
PRNP-201ENST00000379440 OAZ2O95190 189 aa15.18■□□□□ 0.02
PRNP-201ENST00000379440 HOXD10P28358 340 aa15.18■□□□□ 0.02
PRNP-201ENST00000379440 SERPINB9P50453 376 aa15.18■□□□□ 0.02
PRNP-201ENST00000379440 KCNJ2P63252 427 aa15.18■□□□□ 0.02
PRNP-201ENST00000379440 SNCBQ16143 134 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms