RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 EFCAB1Q9HAE3 211 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 KMT5AQ9NQR1 393 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 KLHL42Q9P2K6 505 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 MAD2L2Q9UI95 211 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 ANAPC7Q9UJX3 599 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 PSME2Q9UL46 239 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 EDARQ9UNE0 448 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 AP3M1Q9Y2T2 418 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 PCDHGA8Q9Y5G5 932 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 MON2Q7Z3U7 1717 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 SGK1O00141 431 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 ATMINO43313 823 aaPredicted RBP12□□□□□ -0.49
NPHP4-202ENST00000378161 MYBP10242 640 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 SLC9A1P19634 815 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 ME2P23368 584 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 GRIK1P39086 918 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 RPS3AP61247 264 aaKnown RBP12□□□□□ -0.49
NPHP4-202ENST00000378161 BNIP2Q12982 314 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 ADGRE1Q14246 886 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 SPANXN2Q5MJ10 180 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 HGSNATQ68CP4 663 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 LSMEM2Q8N112 164 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 CADM3Q8N126 398 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 CCNYL1Q8N7R7 359 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 TMIGD2Q96BF3 282 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 DGCR6LQ9BY27 220 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 PCDHB4Q9Y5E5 795 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 UBE4BO95155 1302 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12□□□□□ -0.49
NPHP4-202ENST00000378161 LOC105371267A0A1B0GV96 52 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 ZNF701M0R085 212 aaPredicted RBP12□□□□□ -0.49
NPHP4-202ENST00000378161 PLK4O00444 970 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 TNNC2P02585 160 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 CAPZA2P47755 286 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 GCLMP48507 274 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 POU6F2P78424 691 aaPredicted RBP12□□□□□ -0.49
NPHP4-202ENST00000378161 ABATP80404 500 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 CHRNEQ04844 493 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 MMRN1Q13201 1228 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 PLEKHG7Q6ZR37 379 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 DHRSXQ8N5I4 330 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 ZNF564Q8TBZ8 553 aaPredicted RBP12□□□□□ -0.49
NPHP4-202ENST00000378161 ACTRT2Q8TDY3 377 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 MAP6Q96JE9 813 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 SEMA6BQ9H3T3 888 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 RAB19A4D1S5 217 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 FOXO6A8MYZ6 492 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 PRR5-ARHGAP8B1AHC4 643 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 UGT2B4P06133 528 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 AKR1B1P15121 316 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 PRKCAP17252 672 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 ARHGAP8P85298 464 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 GRB10Q13322 594 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 NAB1Q13506 487 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 BRDTQ58F21 947 aaPredicted RBP12□□□□□ -0.49
NPHP4-202ENST00000378161 RAB43Q86YS6 212 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 MARCH10Q8NA82 808 aaPredicted RBP12□□□□□ -0.49
NPHP4-202ENST00000378161 BHLHE22Q8NFJ8 381 aaPredicted RBP12□□□□□ -0.49
NPHP4-202ENST00000378161 SLC39A13Q96H72 371 aa12□□□□□ -0.49
NPHP4-202ENST00000378161 ACAT1P24752 427 aaKnown RBP11.99□□□□□ -0.49
NPHP4-202ENST00000378161 PRELPP51888 382 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 FAM205BPQ63HN1 556 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 C16orf86Q6ZW13 317 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 SLC13A5Q86YT5 568 aaPredicted RBP11.99□□□□□ -0.49
NPHP4-202ENST00000378161 HPS6Q86YV9 775 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 TAB3Q8N5C8 712 aaPredicted RBP11.99□□□□□ -0.49
NPHP4-202ENST00000378161 EFCAB3Q8N7B9 438 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 KYQ8NBH2 561 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 FANK1Q8TC84 345 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 MED15Q96RN5 788 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 CDADC1Q9BWV3 514 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 BBS2Q9BXC9 721 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 IDI2Q9BXS1 227 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 CPNE5Q9HCH3 593 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 NCKIPSDQ9NZQ3 722 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 CDH22Q9UJ99 828 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 FAM205AQ6ZU69 1335 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 RPTORQ8N122 1335 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 MYO3BQ8WXR4 1341 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 E5RI56 91 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 TBX3O15119 743 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 PRPF4O43172 522 aaKnown RBP eCLIP11.99□□□□□ -0.49
NPHP4-202ENST00000378161 FGFR3P22607 806 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 DENND5BQ6ZUT9 1274 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 LUZP2Q86TE4 346 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 NT5DC3Q86UY8 548 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 GALNT11Q8NCW6 608 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 TCF7L2Q9NQB0 619 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 POMPQ9Y244 141 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 ALG6Q9Y672 507 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 GOLGA8SH3BPF8 625 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 NMT1P30419 496 aaKnown RBP11.99□□□□□ -0.49
NPHP4-202ENST00000378161 VAMP7P51809 220 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 TRAF3Q13114 568 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 STX5Q13190 355 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 MOGSQ13724 837 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 TOMM20Q15388 145 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 ERAP2Q6P179 960 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 PAGE2Q7Z2X7 111 aa11.99□□□□□ -0.49
NPHP4-202ENST00000378161 CDRT15Q96T59 188 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms